X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=Testing%2FTestCopyRescaleDicom.cxx;h=275c532776cb1f2b0ba862abede8ee210cde0c61;hb=70a3a0f95bf2240a6ef4b1d6523c0e6614437304;hp=4f0eb9aa2c36a54213006aaba20bf20a0d7c338a;hpb=51e53b78f995e2dde4f75570a8bf3b0dac5209c2;p=gdcm.git diff --git a/Testing/TestCopyRescaleDicom.cxx b/Testing/TestCopyRescaleDicom.cxx index 4f0eb9aa..275c5327 100644 --- a/Testing/TestCopyRescaleDicom.cxx +++ b/Testing/TestCopyRescaleDicom.cxx @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: TestCopyRescaleDicom.cxx,v $ Language: C++ - Date: $Date: 2004/12/08 11:37:15 $ - Version: $Revision: 1.3 $ + Date: $Date: 2005/01/21 11:40:54 $ + Version: $Revision: 1.8 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -15,8 +15,8 @@ PURPOSE. See the above copyright notices for more information. =========================================================================*/ -#include "gdcmHeader.h" #include "gdcmFile.h" +#include "gdcmFileHelper.h" #include "gdcmValEntry.h" #include "gdcmBinEntry.h" @@ -43,28 +43,26 @@ int CopyRescaleDicom(std::string const & filename, //////////////// Step 1: std::cout << " 1..."; - gdcm::Header *originalH = new gdcm::Header( filename ); - gdcm::Header *copyH = new gdcm::Header( ); + gdcm::File *originalH = new gdcm::File( filename ); + gdcm::File *copyH = new gdcm::File( ); //First of all copy the header field by field // Warning :Accessor gdcmElementSet::GetEntry() should not exist // It was commented out by Mathieu, that was a *good* idea - // (the user does NOT have to know the way we implemented the Header !) + // (the user does NOT have to know the way we implemented the File !) // Waiting for a 'clean' solution, I keep the method ...JPRx //////////////// Step 2: std::cout << "2..."; - originalH->Initialize(); - gdcm::DocEntry* d = originalH->GetNextEntry(); - // Copy of the header content + gdcm::DocEntry* d = originalH->GetFirstEntry(); while(d) { if ( gdcm::BinEntry* b = dynamic_cast(d) ) { - copyH->ReplaceOrCreateByNumber( + copyH->ReplaceOrCreate( b->GetBinArea(), b->GetLength(), b->GetGroup(), @@ -73,7 +71,7 @@ int CopyRescaleDicom(std::string const & filename, } else if ( gdcm::ValEntry* v = dynamic_cast(d) ) { - copyH->ReplaceOrCreateByNumber( + copyH->ReplaceOrCreate( v->GetValue(), v->GetGroup(), v->GetElement(), @@ -87,22 +85,22 @@ int CopyRescaleDicom(std::string const & filename, d=originalH->GetNextEntry(); } - gdcm::File *original = new gdcm::File( originalH ); - gdcm::File *copy = new gdcm::File( copyH ); + gdcm::FileHelper *original = new gdcm::FileHelper( originalH ); + gdcm::FileHelper *copy = new gdcm::FileHelper( copyH ); size_t dataSize = original->GetImageDataSize(); size_t rescaleSize; uint8_t *rescaleImage; - const std::string & bitsStored = originalH->GetEntryByNumber(0x0028,0x0101); + const std::string & bitsStored = originalH->GetEntry(0x0028,0x0101); if( bitsStored == "16" ) { std::cout << "Rescale..."; - copyH->ReplaceOrCreateByNumber( "8", 0x0028, 0x0100); // BitsAllocated - copyH->ReplaceOrCreateByNumber( "8", 0x0028, 0x0101); // BitsStored - copyH->ReplaceOrCreateByNumber( "7", 0x0028, 0x0102); // HighBit - copyH->ReplaceOrCreateByNumber( "0", 0x0028, 0x0103); //Pixel Representation + copyH->ReplaceOrCreate( "8", 0x0028, 0x0100); // BitsAllocated + copyH->ReplaceOrCreate( "8", 0x0028, 0x0101); // BitsStored + copyH->ReplaceOrCreate( "7", 0x0028, 0x0102); // HighBit + copyH->ReplaceOrCreate( "0", 0x0028, 0x0103); //Pixel Representation // We assume the value were from 0 to uint16_t max rescaleSize = dataSize / 2; @@ -146,10 +144,10 @@ int CopyRescaleDicom(std::string const & filename, //////////////// Step 4: std::cout << "4..."; - copy = new gdcm::File( output ); + copy = new gdcm::FileHelper( output ); //Is the file written still gdcm parsable ? - if ( !copy->GetHeader()->IsReadable() ) + if ( !copy->GetFile()->IsReadable() ) { std::cout << " Failed" << std::endl << " " << output << " not readable" << std::endl; @@ -166,18 +164,18 @@ int CopyRescaleDicom(std::string const & filename, size_t dataSizeWritten = copy->GetImageDataSize(); uint8_t* imageDataWritten = copy->GetImageData(); - if (originalH->GetXSize() != copy->GetHeader()->GetXSize() || - originalH->GetYSize() != copy->GetHeader()->GetYSize() || - originalH->GetZSize() != copy->GetHeader()->GetZSize()) + if (originalH->GetXSize() != copy->GetFile()->GetXSize() || + originalH->GetYSize() != copy->GetFile()->GetYSize() || + originalH->GetZSize() != copy->GetFile()->GetZSize()) { std::cout << "Failed" << std::endl << " X Size differs: " << "X: " << originalH->GetXSize() << " # " - << copy->GetHeader()->GetXSize() << " | " + << copy->GetFile()->GetXSize() << " | " << "Y: " << originalH->GetYSize() << " # " - << copy->GetHeader()->GetYSize() << " | " + << copy->GetFile()->GetYSize() << " | " << "Z: " << originalH->GetZSize() << " # " - << copy->GetHeader()->GetZSize() << std::endl; + << copy->GetFile()->GetZSize() << std::endl; delete original; delete copy; delete originalH; @@ -253,7 +251,7 @@ int TestCopyRescaleDicom(int argc, char* argv[]) << std::endl; std::cout << " apply the following to each filename.xxx: " << std::endl; - std::cout << " step 1: parse the image (as gdcmHeader) and call" + std::cout << " step 1: parse the image (as gdcmFile) and call" << " IsReadable(). After that, call GetImageData() and " << "GetImageDataSize() " << std::endl;