X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=Testing%2FTestCopyRescaleDicom.cxx;h=eaff8b4c891e5678c8118a40243e90d0d98758df;hb=587eff0d2fdea1b61c4cc9aa21f06f2ba8b42c10;hp=6a1d1521bfdf511e7353a8153db71739e61fad55;hpb=412cf9757709333001ae81f5f4079e53c62840c7;p=gdcm.git diff --git a/Testing/TestCopyRescaleDicom.cxx b/Testing/TestCopyRescaleDicom.cxx index 6a1d1521..eaff8b4c 100644 --- a/Testing/TestCopyRescaleDicom.cxx +++ b/Testing/TestCopyRescaleDicom.cxx @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: TestCopyRescaleDicom.cxx,v $ Language: C++ - Date: $Date: 2004/12/07 18:16:40 $ - Version: $Revision: 1.2 $ + Date: $Date: 2005/01/24 16:44:54 $ + Version: $Revision: 1.10 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -15,8 +15,8 @@ PURPOSE. See the above copyright notices for more information. =========================================================================*/ -#include "gdcmHeader.h" #include "gdcmFile.h" +#include "gdcmFileHelper.h" #include "gdcmValEntry.h" #include "gdcmBinEntry.h" @@ -43,28 +43,20 @@ int CopyRescaleDicom(std::string const & filename, //////////////// Step 1: std::cout << " 1..."; - gdcm::Header *originalH = new gdcm::Header( filename ); - gdcm::Header *copyH = new gdcm::Header( ); + gdcm::File *originalH = new gdcm::File( filename ); + gdcm::File *copyH = new gdcm::File( ); //First of all copy the header field by field - // Warning :Accessor gdcmElementSet::GetEntry() should not exist - // It was commented out by Mathieu, that was a *good* idea - // (the user does NOT have to know the way we implemented the Header !) - // Waiting for a 'clean' solution, I keep the method ...JPRx - - //////////////// Step 2: std::cout << "2..."; - originalH->Initialize(); - gdcm::DocEntry* d = originalH->GetNextEntry(); - // Copy of the header content + gdcm::DocEntry* d = originalH->GetFirstEntry(); while(d) { if ( gdcm::BinEntry* b = dynamic_cast(d) ) { - copyH->ReplaceOrCreateByNumber( + copyH->Insert( b->GetBinArea(), b->GetLength(), b->GetGroup(), @@ -73,7 +65,7 @@ int CopyRescaleDicom(std::string const & filename, } else if ( gdcm::ValEntry* v = dynamic_cast(d) ) { - copyH->ReplaceOrCreateByNumber( + copyH->Insert( v->GetValue(), v->GetGroup(), v->GetElement(), @@ -87,23 +79,22 @@ int CopyRescaleDicom(std::string const & filename, d=originalH->GetNextEntry(); } - gdcm::File *original = new gdcm::File( originalH ); - gdcm::File *copy = new gdcm::File( copyH ); + gdcm::FileHelper *original = new gdcm::FileHelper( originalH ); + gdcm::FileHelper *copy = new gdcm::FileHelper( copyH ); size_t dataSize = original->GetImageDataSize(); - uint8_t* imageData = original->GetImageData(); size_t rescaleSize; uint8_t *rescaleImage; - const std::string & bitsStored = originalH->GetEntryByNumber(0x0028,0x0101); + const std::string & bitsStored = originalH->GetEntryValue(0x0028,0x0101); if( bitsStored == "16" ) { std::cout << "Rescale..."; - copyH->ReplaceOrCreateByNumber( "8", 0x0028, 0x0100); // BitsAllocated - copyH->ReplaceOrCreateByNumber( "8", 0x0028, 0x0101); // BitsStored - copyH->ReplaceOrCreateByNumber( "7", 0x0028, 0x0102); // HighBit - copyH->ReplaceOrCreateByNumber( "0", 0x0028, 0x0103); //Pixel Representation + copyH->Insert( "8", 0x0028, 0x0100); // BitsAllocated + copyH->Insert( "8", 0x0028, 0x0101); // BitsStored + copyH->Insert( "7", 0x0028, 0x0102); // HighBit + copyH->Insert( "0", 0x0028, 0x0103); //Pixel Representation // We assume the value were from 0 to uint16_t max rescaleSize = dataSize / 2; @@ -147,10 +138,10 @@ int CopyRescaleDicom(std::string const & filename, //////////////// Step 4: std::cout << "4..."; - copy = new gdcm::File( output ); + copy = new gdcm::FileHelper( output ); //Is the file written still gdcm parsable ? - if ( !copy->GetHeader()->IsReadable() ) + if ( !copy->GetFile()->IsReadable() ) { std::cout << " Failed" << std::endl << " " << output << " not readable" << std::endl; @@ -167,18 +158,18 @@ int CopyRescaleDicom(std::string const & filename, size_t dataSizeWritten = copy->GetImageDataSize(); uint8_t* imageDataWritten = copy->GetImageData(); - if (originalH->GetXSize() != copy->GetHeader()->GetXSize() || - originalH->GetYSize() != copy->GetHeader()->GetYSize() || - originalH->GetZSize() != copy->GetHeader()->GetZSize()) + if (originalH->GetXSize() != copy->GetFile()->GetXSize() || + originalH->GetYSize() != copy->GetFile()->GetYSize() || + originalH->GetZSize() != copy->GetFile()->GetZSize()) { std::cout << "Failed" << std::endl << " X Size differs: " << "X: " << originalH->GetXSize() << " # " - << copy->GetHeader()->GetXSize() << " | " + << copy->GetFile()->GetXSize() << " | " << "Y: " << originalH->GetYSize() << " # " - << copy->GetHeader()->GetYSize() << " | " + << copy->GetFile()->GetYSize() << " | " << "Z: " << originalH->GetZSize() << " # " - << copy->GetHeader()->GetZSize() << std::endl; + << copy->GetFile()->GetZSize() << std::endl; delete original; delete copy; delete originalH; @@ -254,7 +245,7 @@ int TestCopyRescaleDicom(int argc, char* argv[]) << std::endl; std::cout << " apply the following to each filename.xxx: " << std::endl; - std::cout << " step 1: parse the image (as gdcmHeader) and call" + std::cout << " step 1: parse the image (as gdcmFile) and call" << " IsReadable(). After that, call GetImageData() and " << "GetImageDataSize() " << std::endl;