X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=bbtk%2Fsrc%2FbbcreaMaracasVisuSliceImage.cxx;h=10306c6f34b3fc7a16292bc9746365c101369cc2;hb=7237c161ca713d5054c9a5cd7dc7188d5ac65ae9;hp=253190600e631c75bfa9f2d20e57977328a9eb0f;hpb=2890cab0524520113fd791f61c59e53e2e53b75f;p=creaMaracasVisu.git

diff --git a/bbtk/src/bbcreaMaracasVisuSliceImage.cxx b/bbtk/src/bbcreaMaracasVisuSliceImage.cxx
index 2531906..10306c6 100644
--- a/bbtk/src/bbcreaMaracasVisuSliceImage.cxx
+++ b/bbtk/src/bbcreaMaracasVisuSliceImage.cxx
@@ -1,3 +1,28 @@
+/*# ---------------------------------------------------------------------
+#
+# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
+#                        pour la Sant�)
+# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
+# Previous Authors : Laurent Guigues, Jean-Pierre Roux
+# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
+#
+#  This software is governed by the CeCILL-B license under French law and
+#  abiding by the rules of distribution of free software. You can  use,
+#  modify and/ or redistribute the software under the terms of the CeCILL-B
+#  license as circulated by CEA, CNRS and INRIA at the following URL
+#  http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+#  or in the file LICENSE.txt.
+#
+#  As a counterpart to the access to the source code and  rights to copy,
+#  modify and redistribute granted by the license, users are provided only
+#  with a limited warranty  and the software's author,  the holder of the
+#  economic rights,  and the successive licensors  have only  limited
+#  liability.
+#
+#  The fact that you are presently reading this means that you have had
+#  knowledge of the CeCILL-B license and that you accept its terms.
+# ------------------------------------------------------------------------ */
+
 #include "bbcreaMaracasVisuSliceImage.h"
 #include "bbcreaMaracasVisuPackage.h"
 namespace bbcreaMaracasVisu
@@ -9,23 +34,71 @@ BBTK_ADD_BLACK_BOX_TO_PACKAGE(creaMaracasVisu,SliceImage)
 BBTK_BLACK_BOX_IMPLEMENTATION(SliceImage,bbtk::AtomicBlackBox);
 void SliceImage::Process()
 {
-	//printf("EED 0 SliceImage::Process \n");
 	vtkImageData *imagedata=NULL;
 
 	//std::cout<<"MSJ: test SliceImage::Process()"<<this<<std::endl;
-	if ( bbGetInputIn()!=NULL ){
-
+	if ( bbGetInputIn()!=NULL )
+	{
   	  imageReslice->SetInput( bbGetInputIn() );
   	  imageReslice->SetInformationInput(bbGetInputIn() );
-	  imageReslice->SetResliceAxesDirectionCosines(1,0,0, 0,1,0 ,0,0,1);
-	  imageReslice->SetResliceAxesOrigin(0,0, bbGetInputZ() );
+
+	  double slice=bbGetInputSlice();
+	  if (slice<0) 
+          { 
+ 		slice=0;
+          } 
+	
+	  if (bbGetInputTypeOrientation()==3)
+	  {
+		// Orientation 3 = FREE
+		// v1 = [ v1x , v1y , v1z ]
+		// v2 = [ v2x , v2y , v2z ]
+		// v3 = [ v3x , v3y , v3z ]
+		// SetResliceAxesDirectionCosines(v1x,v2x,v3x,v1y,v2y,v3y,v1z,v2z,v3z);
+	       imageReslice->SetResliceAxesDirectionCosines( bbGetInputResliceAxesDirectionCosines()[0],  // v1x
+                                                             bbGetInputResliceAxesDirectionCosines()[3],  // v2x
+                                                             bbGetInputResliceAxesDirectionCosines()[6],  // v3x
+                                                             bbGetInputResliceAxesDirectionCosines()[1],  // v1y
+                                                             bbGetInputResliceAxesDirectionCosines()[4],  // v2y
+                                                             bbGetInputResliceAxesDirectionCosines()[7],  // v3y
+                                                             bbGetInputResliceAxesDirectionCosines()[2],  // v1z
+                                                             bbGetInputResliceAxesDirectionCosines()[5],  // v2z
+                                                             bbGetInputResliceAxesDirectionCosines()[8]   // v3z
+                                                           );  
+  	       imageReslice->SetResliceAxesOrigin( slice*bbGetInputIn()->GetSpacing()[0] ,0 ,0);
+	  } else if (bbGetInputTypeOrientation()==2)
+	  {
+		// Orientation 2 = YZ
+		// v1 = [ 0 , 0 ,-1 ]
+		// v2 = [ 1 , 0 , 0 ]
+		// v3 = [ 0 ,-1 , 0 ]
+		// SetResliceAxesDirectionCosines(v1x,v2x,v3x,v1y,v2y,v3y,v1z,v2z,v3z);
+	       imageReslice->SetResliceAxesDirectionCosines(0,1,0, 0,0,-1 ,-1,0,0);  
+  	       imageReslice->SetResliceAxesOrigin( slice*bbGetInputIn()->GetSpacing()[0] ,0 ,0);
+	  } else if (bbGetInputTypeOrientation()==1) {     
+		// Orientation 1 = XZ
+		// v1 = [ 1 , 0 , 0 ]
+		// v2 = [ 0 , 0 , 1 ]
+		// v3 = [ 0 ,-1 , 0 ]
+		// SetResliceAxesDirectionCosines(v1x,v2x,v3x,v1y,v2y,v3y,v1z,v2z,v3z);
+	       imageReslice->SetResliceAxesDirectionCosines(1,0,0, 0,0,-1 ,0,1,0); 
+	       imageReslice->SetResliceAxesOrigin(0, slice*bbGetInputIn()->GetSpacing()[1],0 );
+	  } else    
+	  {
+		// Orientation 0 = XY
+		// v1 = [ 1 , 0 , 0 ]
+		// v2 = [ 0 , 1 , 0 ]
+		// v3 = [ 0 , 0 , 1 ]
+		// SetResliceAxesDirectionCosines(v1x,v2x,v3x,v1y,v2y,v3y,v1z,v2z,v3z);
+	       imageReslice->SetResliceAxesDirectionCosines(1,0,0, 0,1,0 ,0,0,1);   
+	       imageReslice->SetResliceAxesOrigin(0,0, slice*bbGetInputIn()->GetSpacing()[2] );
+	  } 
 	  imageReslice->SetOutputDimensionality(2);
 	  imageReslice->SetInterpolationModeToLinear();
-	   imagedata = imageReslice->GetOutput();
+	  imagedata = imageReslice->GetOutput();
 	  imagedata->Update();
 	  imagedata->UpdateInformation();	
-	  //printf("EED 1 SliceImage::Process %p\n", imagedata);
-  }
+  	}
   bbSetOutputOut( imagedata );
 }
 	
@@ -35,7 +108,22 @@ void SliceImage::Process()
 	{
 		bbSetInputIn(NULL);
 		bbSetInputZ(0);
+		bbSetInputSlice(0);
+		bbSetInputTypeOrientation(0);
 		imageReslice=NULL;
+ 		std::vector<double> lstCos;
+                lstCos.push_back(1); // v1x
+                lstCos.push_back(0); // v1y
+                lstCos.push_back(0); // v1z
+
+                lstCos.push_back(0); // v2x
+                lstCos.push_back(1); // v2y
+                lstCos.push_back(0); // v2z
+
+                lstCos.push_back(0); // v3x
+                lstCos.push_back(0); // v3y
+                lstCos.push_back(1); // v3z
+                bbSetInputResliceAxesDirectionCosines(lstCos);
 	}
 	
 	//-----------------------------------------------------------------