X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=bbtk_Slicer_PKG%2Fsrc%2FbbSlicerN4ITKMRIBiascorrection.cxx;fp=bbtk_Slicer_PKG%2Fsrc%2FbbSlicerN4ITKMRIBiascorrection.cxx;h=5cf847ee0e287add1e1399fd4cd2006550254051;hb=e7b4e2c9254e9e431f74acc92e3f0d40fc5e7ef6;hp=0000000000000000000000000000000000000000;hpb=cd590ce5fff20d69c7060340235a35e9c2a9ef86;p=creaCLI.git

diff --git a/bbtk_Slicer_PKG/src/bbSlicerN4ITKMRIBiascorrection.cxx b/bbtk_Slicer_PKG/src/bbSlicerN4ITKMRIBiascorrection.cxx
new file mode 100644
index 0000000..5cf847e
--- /dev/null
+++ b/bbtk_Slicer_PKG/src/bbSlicerN4ITKMRIBiascorrection.cxx
@@ -0,0 +1,66 @@
+#include "bbSlicerN4ITKMRIBiascorrection.h"
+#include "bbSlicerPackage.h"
+
+namespace bbSlicer {
+    BBTK_ADD_BLACK_BOX_TO_PACKAGE ( Slicer, N4ITKMRIBiascorrection )
+    BBTK_BLACK_BOX_IMPLEMENTATION ( N4ITKMRIBiascorrection, bbtk::AtomicBlackBox );
+
+    void N4ITKMRIBiascorrection::Process ( ) {
+
+        // GENERATED
+
+int _argc =12;
+std::string lib = "/home/riveros/.slicer/Slicer4-bin/Slicer-build/lib/Slicer-4.0/cli-modules/libN4ITKBiasFieldCorrectionLib.so";
+char * _argv[ ] = { Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--inputimage"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputinputImageName( ) ) ) ,"@@@@@"," --inputimage ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--maskimage"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputmaskImageName( ) ) ) ,"@@@@@"," --maskimage ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--outputimage"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputoutputImageName( ) ) ) ,"@@@@@"," --outputimage ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--outputbiasfield"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputoutputBiasFieldName( ) ) ) ,"@@@@@"," --outputbiasfield ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--iterations"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputnumberOfIterations( ) ) ) ,"@@@@@"," --iterations ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--convergencethreshold"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputconvergenceThreshold( ) ) ) ,"@@@@@"," --convergencethreshold ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--meshresolution"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputinitialMeshResolution( ) ) ) ,"@@@@@"," --meshresolution ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--splinedistance"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputsplineDistance( ) ) ) ,"@@@@@"," --splinedistance ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--shrinkfactor"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputshrinkFactor( ) ) ) ,"@@@@@"," --shrinkfactor ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--bsplineorder"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputbsplineOrder( ) ) ) ,"@@@@@"," --bsplineorder ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--weightimage"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputweightImageName( ) ) ) ,"@@@@@"," --weightimage ") ),
+Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--histogramsharpening"  ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputhistogramSharpening( ) ) ) ,"@@@@@"," --histogramsharpening ") ) };
+
+        // EO GENERATED
+        this->execute( lib, _argc, _argv );
+
+    }
+
+    void N4ITKMRIBiascorrection::execute ( std::string lib, int _argc, char * _argv[] ) {
+        void* handle = dlopen( lib.c_str( ), RTLD_NOW | RTLD_GLOBAL );
+        if ( ! handle ) {
+            std::cerr << "CAN'T OPEN LIBRARY: " << dlerror( ) << '\n';
+            return;
+        }
+        typedef int (*method_t )( int argc, char * argv[] );
+        // RESET ERROR
+        dlerror( );
+        // PROTOTYPE
+        method_t myMethod = ( method_t ) dlsym( handle, "ModuleEntryPoint" );
+        const char *dlsym_error = dlerror( );
+        if ( dlsym_error ) {
+            std::cerr << "CAN'T LOAD SYMBOL 'ModuleEntryPoint':" << dlsym_error << '\n';
+            dlclose( handle );
+            return;
+        }
+        // METHOD CALL
+        myMethod( _argc, _argv );
+        // CLOSING LIB
+        dlclose( handle );
+    }
+
+    void N4ITKMRIBiascorrection::bbUserSetDefaultValues ( ) {
+    }
+
+    void N4ITKMRIBiascorrection::bbUserInitializeProcessing ( ) {
+    }
+
+    void N4ITKMRIBiascorrection::bbUserFinalizeProcessing ( ) {
+    }
+}
+// EO namespace bbSlicer
+
+