X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=cluster_tools%2Fgate_job_cluster.job;h=1242dfd06fd9ecb32e4fd9c20345f225b8d35354;hb=1bd2bf8d3ee24d10708d27d1347eab8467318c94;hp=506e125ec5db68bdebc31d72bd93de471b471b79;hpb=18b919514b7ce206fb43a90aefde4f79f6d41401;p=clitk.git diff --git a/cluster_tools/gate_job_cluster.job b/cluster_tools/gate_job_cluster.job index 506e125..1242dfd 100644 --- a/cluster_tools/gate_job_cluster.job +++ b/cluster_tools/gate_job_cluster.job @@ -65,10 +65,14 @@ test -d "${MACRODIR}" && test -d "${MACRODIR}/mac" || error "invalid macro" echo "Copying inputs" LOCALMACRODIR=$(mktemp -d) +trap "mv output ${OUTPUTDIR}/output.${PBS_JOBID%%.*} ; rm -r ${LOCALMACRODIR} ; exit 1" 1 2 3 15 cd ${LOCALMACRODIR} cp -r -L "${MACRODIR}"/{data,mac} . mkdir output +# Enforce one thread +ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS=1 + echo "Lauching macro" date if test "$RELEASEDIR" = "NONE"