X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=cluster_tools%2Fgate_job_cluster.job;h=e95f7c0e23551d01f7e90b32220d4fb3f651b955;hb=8eccf1e25d2ab7273145d2475ae015aea5f6ff94;hp=6b893b11395af8acad335a094e6d9f3b4557534e;hpb=27e8d3fdd1dd0dee41d03e3cc31846423b994439;p=clitk.git

diff --git a/cluster_tools/gate_job_cluster.job b/cluster_tools/gate_job_cluster.job
index 6b893b1..e95f7c0 100644
--- a/cluster_tools/gate_job_cluster.job
+++ b/cluster_tools/gate_job_cluster.job
@@ -11,10 +11,7 @@
 #PBS -r n
 #PBS -l walltime=100:00:00
 #PBS -j oe
-
-#env
-#pwd
-#exit 1
+#PBS -l mem=3Gb
 
 
 function error {
@@ -65,7 +62,7 @@ test -d "${MACRODIR}" && test -d "${MACRODIR}/mac" || error "invalid macro"
 
 echo "Copying inputs"
 LOCALMACRODIR=$(mktemp -d)
-trap "rm -rf ${LOCALMACRODIR} ; exit 1" 1 2 3 15
+trap "mv output ${OUTPUTDIR}/output.${PBS_JOBID%%.*} ; rm -r ${LOCALMACRODIR} ; exit 1" 1 2 3 15
 cd ${LOCALMACRODIR}
 cp -r -L "${MACRODIR}"/{data,mac} .
 mkdir output