X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=cluster_tools%2Fgate_run_submit_cluster_nomove.sh;h=c3eb2f0033964374ffc121487f4d7863435ba5ec;hb=83eb68efc39ad8fcb5e4e684afafcfc86b829c96;hp=47ad6998ee05d5417db159e41bbccfc9ffdb15b2;hpb=f396442c6161cc824a1794863c0d98322ed1d9b5;p=clitk.git diff --git a/cluster_tools/gate_run_submit_cluster_nomove.sh b/cluster_tools/gate_run_submit_cluster_nomove.sh old mode 100644 new mode 100755 index 47ad699..c3eb2f0 --- a/cluster_tools/gate_run_submit_cluster_nomove.sh +++ b/cluster_tools/gate_run_submit_cluster_nomove.sh @@ -90,9 +90,9 @@ while test $NJOBS -gt 0; do echo "Launching Gate log in ${OUTPUTDIR}/gate_${NJOBS}.log" PARAM=\"${PARAM}\" INDEX=${NJOBS} INDEXMAX=${NJOBSMAX} OUTPUTDIR=${OUTPUTDIR} RELEASEDIR=${RELEASEDIR} MACROFILE=${MACROFILE} MACRODIR=${MACRODIR} PBS_JOBID="local_${NJOBS}" bash "${JOBFILE}" > ${OUTPUTDIR}/gate_${NJOBS}.log & else - qsub -N "gatejob.${RUNID}" -o "${OUTPUTDIR}" \ - -v "PARAM=${PARAM},INDEX=${NJOBS},INDEXMAX=${NJOBSMAX},OUTPUTDIR=${OUTPUTDIR},RELEASEDIR=${RELEASEDIR},MACROFILE=${MACROFILE},MACRODIR=${MACRODIR}" \ - "${JOBFILE}" || error "submission error" + qsub -N "gatejob.${RUNID}" -o "${OUTPUTDIR}" -e "${OUTPUTDIR}" \ + -v "PARAM=${PARAM},INDEX=${NJOBS},INDEXMAX=${NJOBSMAX},OUTPUTDIR=${OUTPUTDIR},RELEASEDIR=${RELEASEDIR},MACROFILE=${MACROFILE},MACRODIR=${MACRODIR}" \ + "${JOBFILE}" || error "submission error" fi let NJOBS--