X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=common%2FclitkImageToImageGenericFilterBase.cxx;h=259ae04223cd1369dd69ea9d54f159d3a44492a6;hb=1a13aa34de4f99334b27050c18b32e6e4c8f0650;hp=bf68c9c28c9ebddc4541210d43bf1d0f0072eab7;hpb=1e034c70105f0926939acaaa27ddb46e904ae8bf;p=clitk.git diff --git a/common/clitkImageToImageGenericFilterBase.cxx b/common/clitkImageToImageGenericFilterBase.cxx index bf68c9c..259ae04 100644 --- a/common/clitkImageToImageGenericFilterBase.cxx +++ b/common/clitkImageToImageGenericFilterBase.cxx @@ -15,7 +15,11 @@ - BSD See included LICENSE.txt file - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html ======================================================================-====*/ + +// clitk #include "clitkImageToImageGenericFilterBase.h" + +// itk #include //-------------------------------------------------------------------- @@ -25,11 +29,14 @@ clitk::ImageToImageGenericFilterBase::~ImageToImageGenericFilterBase() {} //-------------------------------------------------------------------- clitk::ImageToImageGenericFilterBase::ImageToImageGenericFilterBase(std::string n) - :mIOVerbose(false) + :m_IOVerbose(false) { - mFilterName = n; - mFailOnImageTypeError = true; - mReadOnDisk = true; + m_FilterName = n; + m_FailOnImageTypeError = true; + m_ReadOnDisk = true; + m_LastError = ""; + StopOnErrorOn(); + SetFilterBase(NULL); } //-------------------------------------------------------------------- @@ -37,7 +44,7 @@ clitk::ImageToImageGenericFilterBase::ImageToImageGenericFilterBase(std::string //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetInputFilenames(const std::vector & filenames) { - mInputFilenames=filenames; + m_InputFilenames = filenames; } //-------------------------------------------------------------------- @@ -45,7 +52,7 @@ void clitk::ImageToImageGenericFilterBase::SetInputFilenames(const std::vector & filenames) { - mOutputFilenames.clear(); - std::copy(filenames.begin(),filenames.end(),mOutputFilenames.begin()); + m_OutputFilenames.clear(); + std::copy(filenames.begin(),filenames.end(),m_OutputFilenames.begin()); } //-------------------------------------------------------------------- @@ -97,8 +104,8 @@ void clitk::ImageToImageGenericFilterBase::SetOutputFilenames(const std::vector< //-------------------------------------------------------------------- std::string clitk::ImageToImageGenericFilterBase::GetOutputFilename() { - assert(mOutputFilenames.size() == 1); - return mOutputFilenames.front(); + assert(m_OutputFilenames.size() == 1); + return m_OutputFilenames.front(); } //-------------------------------------------------------------------- @@ -107,21 +114,21 @@ std::string clitk::ImageToImageGenericFilterBase::GetOutputFilename() void clitk::ImageToImageGenericFilterBase::GetInputImageDimensionAndPixelType(unsigned int& dim, \ std::string& pixeltype,unsigned int& components) { - if (mReadOnDisk && mInputFilenames.size()) { + if (m_ReadOnDisk && m_InputFilenames.size()) { int comp_temp,dim_temp; //clitkCommonImage takes ints - ReadImageDimensionAndPixelType(mInputFilenames[0], dim_temp, pixeltype,comp_temp); + ReadImageDimensionAndPixelType(m_InputFilenames[0], dim_temp, pixeltype,comp_temp); components=comp_temp; dim=dim_temp; } else { - if (mInputVVImages.size()) { - pixeltype=mInputVVImages[0]->GetScalarTypeAsString(); - dim=mInputVVImages[0]->GetNumberOfDimensions(); - components=mInputVVImages[0]->GetNumberOfScalarComponents(); + if (m_InputVVImages.size()) { + pixeltype = m_InputVVImages[0]->GetScalarTypeAsITKString(); + dim = m_InputVVImages[0]->GetNumberOfDimensions(); + components = m_InputVVImages[0]->GetNumberOfScalarComponents(); } else assert(false); //No input image, shouldn't happen } - if (mIOVerbose) { - std::cout << "Input is " << mDim << "D " << mPixelTypeName << "." << std::endl; + if (m_IOVerbose) { + std::cout << "Input is " << m_Dim << "D " << m_PixelTypeName << "." << std::endl; } } //-------------------------------------------------------------------- @@ -130,8 +137,8 @@ void clitk::ImageToImageGenericFilterBase::GetInputImageDimensionAndPixelType(un //-------------------------------------------------------------------- vvImage::Pointer clitk::ImageToImageGenericFilterBase::GetOutputVVImage () { - assert(mOutputVVImages.size()); - return mOutputVVImages[0]; + assert(m_OutputVVImages.size()); + return m_OutputVVImages[0]; } //-------------------------------------------------------------------- @@ -139,7 +146,7 @@ vvImage::Pointer clitk::ImageToImageGenericFilterBase::GetOutputVVImage () //-------------------------------------------------------------------- std::vector clitk::ImageToImageGenericFilterBase::GetOutputVVImages() { - return mOutputVVImages; + return m_OutputVVImages; } //-------------------------------------------------------------------- @@ -147,8 +154,8 @@ std::vector clitk::ImageToImageGenericFilterBase::GetOutputVVI //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetInputVVImage (vvImage::Pointer input) { - mInputVVImages.clear(); - mInputVVImages.push_back(input); + m_InputVVImages.clear(); + m_InputVVImages.push_back(input); } //-------------------------------------------------------------------- @@ -156,7 +163,7 @@ void clitk::ImageToImageGenericFilterBase::SetInputVVImage (vvImage::Pointer inp //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::AddInputVVImage (vvImage::Pointer input) { - mInputVVImages.push_back(input); + m_InputVVImages.push_back(input); } //-------------------------------------------------------------------- @@ -164,7 +171,7 @@ void clitk::ImageToImageGenericFilterBase::AddInputVVImage (vvImage::Pointer inp //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetInputVVImages (std::vector input) { - mInputVVImages=input; + m_InputVVImages=input; } //-------------------------------------------------------------------- @@ -181,10 +188,10 @@ void clitk::ImageToImageGenericFilterBase::PrintAvailableImageTypes() //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::ImageTypeError() { - std::cerr << "**Error** The filter <" << mFilterName << "> is not available for " - << mDim << "D images with pixel=" - << mPixelTypeName << " and " - << mNbOfComponents << " component." << std::endl; + std::cerr << "**Error** The filter <" << m_FilterName << "> is not available for " + << m_Dim << "D images with pixel=" + << m_PixelTypeName << " and " + << m_NbOfComponents << " component." << std::endl; std::cerr << GetAvailableImageTypes(); exit(0); } @@ -203,7 +210,7 @@ void clitk::ImageToImageGenericFilterBase::SetImageTypeError() //-------------------------------------------------------------------- const std::string & clitk::ImageToImageGenericFilterBase::GetFilterName() { - return mFilterName; + return m_FilterName; } //-------------------------------------------------------------------- @@ -211,7 +218,7 @@ const std::string & clitk::ImageToImageGenericFilterBase::GetFilterName() //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetFilterName(std::string & n) { - mFilterName = n; + m_FilterName = n; } //-------------------------------------------------------------------- @@ -219,7 +226,7 @@ void clitk::ImageToImageGenericFilterBase::SetFilterName(std::string & n) //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetIOVerbose(bool b) { - mIOVerbose = b; + m_IOVerbose = b; } //-------------------------------------------------------------------- @@ -274,12 +281,12 @@ DEF_SetNextOutput_And_GetInput(double, 4); template void clitk::ImageToImageGenericFilterBase::SetNextOutput(typename ImageType::Pointer output) { - if (mOutputFilenames.size()) { - clitk::writeImage(output, mOutputFilenames.front(), mIOVerbose); - mOutputFilenames.pop_front(); + if (m_OutputFilenames.size()) { + clitk::writeImage(output, m_OutputFilenames.front(), m_IOVerbose); + m_OutputFilenames.pop_front(); } - if (mInputVVImages.size()) //We assume that if a vv image is set as input, we want one as the output - mOutputVVImages.push_back(vvImageFromITK(output)); + if (m_InputVVImages.size()) //We assume that if a vv image is set as input, we want one as the output + m_OutputVVImages.push_back(vvImageFromITK(output)); } //-------------------------------------------------------------------- @@ -288,11 +295,11 @@ void clitk::ImageToImageGenericFilterBase::SetNextOutput(typename ImageType::Poi template typename ImageType::Pointer clitk::ImageToImageGenericFilterBase::GetInput(unsigned int n) { - if (mReadOnDisk && mInputFilenames.size() > n) { - return clitk::readImage(mInputFilenames[n], mIOVerbose); + if (m_ReadOnDisk && m_InputFilenames.size() > n) { + return clitk::readImage(m_InputFilenames[n], m_IOVerbose); } else { - if (mInputVVImages.size() > n) - return typename ImageType::Pointer(const_cast(vvImageToITK(mInputVVImages[n]).GetPointer())); + if (m_InputVVImages.size() > n) + return typename ImageType::Pointer(const_cast(vvImageToITK(m_InputVVImages[n]).GetPointer())); else { assert(false); //No input, this shouldn't happen return typename ImageType::Pointer(NULL); @@ -302,4 +309,26 @@ typename ImageType::Pointer clitk::ImageToImageGenericFilterBase::GetInput(unsig //-------------------------------------------------------------------- +//-------------------------------------------------------------------- +void clitk::ImageToImageGenericFilterBase::MustStop() +{ + if (m_FilterBase != NULL) { + m_FilterBase->SetMustStop(true); + } +} +//-------------------------------------------------------------------- + + +//-------------------------------------------------------------------- +void clitk::ImageToImageGenericFilterBase::DeleteLastOutputImage() +{ + if (m_OutputVVImages.size()>1) { + m_OutputVVImages.pop_back(); + } +} +//-------------------------------------------------------------------- + + +//-------------------------------------------------------------------- +