X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=common%2FvvFromITK.h;h=d44cf728e84a91df68605f0028e3318bc76732a1;hb=db97ac84d8271b39696a1bb254f7c5c4db578dfa;hp=818705176e5f2d4701af011aed6cef7f5f216669;hpb=f0208631b72d804fd18e692a4f96acea88709023;p=clitk.git diff --git a/common/vvFromITK.h b/common/vvFromITK.h index 8187051..d44cf72 100644 --- a/common/vvFromITK.h +++ b/common/vvFromITK.h @@ -23,7 +23,6 @@ // itk #include -#include //------------------------------------------------------------------------------ /**Converts the itk image to vv, handling the 4D problem @@ -33,77 +32,39 @@ template vvImage::Pointer vvImageFromITK(type { assert(Dim < 5 && Dim > 0); // We don't handle anything higher than 4-dimensional (for the moment :-p) vvImage::Pointer vv_image=vvImage::New(); - vv_image->Init(); //Delete any existing images typedef itk::Image< PixelType, Dim > InputImageType; if (Dim == 4 || time_sequence) //The time sequence case: create a series of VTK images { - typedef itk::Image< PixelType, Dim - 1 > ConnectorImageType; - typedef itk::ImageToVTKImageFilter ConnectorType; - typedef itk::ExtractImageFilter FilterType; - - typename FilterType::Pointer filter = FilterType::New(); - typename ConnectorType::Pointer connector = ConnectorType::New(); + typedef itk::Image< PixelType, Dim - 1 > ItkImageType; + typedef itk::ExtractImageFilter FilterType; //extract the 3D slices and put them in a std::vector + input->UpdateOutputInformation(); typename InputImageType::RegionType inputRegion = input->GetLargestPossibleRegion(); typename InputImageType::SizeType inputSize = inputRegion.GetSize(); - + typename InputImageType::IndexType start = inputRegion.GetIndex(); typename InputImageType::SizeType extractedRegionSize = inputSize; typename InputImageType::RegionType extractedRegion; extractedRegionSize[Dim - 1] = 0; extractedRegion.SetSize(extractedRegionSize); - filter->SetInput(input); - connector->SetInput(filter->GetOutput()); - - typename InputImageType::IndexType start = inputRegion.GetIndex(); - for (unsigned int i = 0; i < inputSize[Dim - 1]; i++) { start[Dim - 1] = i; extractedRegion.SetIndex(start); + + typename FilterType::Pointer filter = FilterType::New(); filter->SetExtractionRegion(extractedRegion); - try { - filter->Update(); - } - catch ( itk::ExceptionObject & err ) { - std::cerr << "Error while setting vvImage from ITK (Dim==4) [Extract phase]" - << " " << err << std::endl; - return vv_image; - } - try { - connector->Update(); - } - catch ( itk::ExceptionObject & err ) { - std::cerr << "Error while setting vvImage from ITK (Dim==4) [Connect phase]" - << " " << err << std::endl; - return vv_image; - } - vtkImageData *image = vtkImageData::New(); - image->DeepCopy(connector->GetOutput()); - vv_image->AddImage(image); + filter->SetInput(input); + filter->ReleaseDataFlagOn(); + vv_image->AddItkImage(filter->GetOutput()); } vv_image->SetTimeSpacing(input->GetSpacing()[Dim-1]); - vv_image->SetTimeOrigin(input->GetOrigin()[Dim-1]); + vv_image->SetTimeOrigin(input->GetOrigin()[Dim-1]); } else //Dim == 1,2,3 and not time_sequence { - typedef itk::Image< PixelType, Dim > ConnectorImageType; - typedef itk::ImageToVTKImageFilter ConnectorType; - typename ConnectorType::Pointer connector = ConnectorType::New(); - connector->SetInput(input); - - try { - connector->Update(); - } - catch ( itk::ExceptionObject & err ) { - std::cerr << "Error while setting vvImage from ITK (Dim==3)" - << " " << err << std::endl; - return vv_image; - } - vtkImageData *image = vtkImageData::New(); - image->DeepCopy(connector->GetOutput()); - vv_image->AddImage(image); + vv_image->AddItkImage(input); } return vv_image; }