X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=common%2FvvImage.cxx;h=9b9ca8289956b832b19e9dca0b6b47300208c6e1;hb=163fa80ef3873595f3e3cf75fb03e53536d1a6ee;hp=ae5c5a645ca5c842524be2c8b03c617485254571;hpb=9bcf64b7f7c5a7f0a39843df634c05b5d9e4e237;p=clitk.git
diff --git a/common/vvImage.cxx b/common/vvImage.cxx
index ae5c5a6..9b9ca82 100644
--- a/common/vvImage.cxx
+++ b/common/vvImage.cxx
@@ -1,30 +1,22 @@
-#ifndef VVIMAGE_CXX
-#define VVIMAGE_CXX
-
-/*-------------------------------------------------------------------------
-
-Program: vv
-Language: C++
-Author : Pierre Seroul (pierre.seroul@gmail.com)
-
-Copyright (C) 2008
-Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
-CREATIS-LRMN http://www.creatis.insa-lyon.fr
+/*=========================================================================
+ Program: vv http://www.creatis.insa-lyon.fr/rio/vv
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation, version 3 of the License.
+ Authors belong to:
+ - University of LYON http://www.universite-lyon.fr/
+ - Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
+ - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU General Public License for more details.
+ This software is distributed WITHOUT ANY WARRANTY; without even
+ the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE. See the copyright notices for more information.
-You should have received a copy of the GNU General Public License
-along with this program. If not, see .
-
--------------------------------------------------------------------------*/
+ It is distributed under dual licence
+ - BSD See included LICENSE.txt file
+ - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+======================================================================-====*/
+#ifndef VVIMAGE_CXX
+#define VVIMAGE_CXX
#include "vvImage.h"
#include "vtkImageData.h"
#include "clitkCommon.h"
@@ -32,157 +24,177 @@ along with this program. If not, see .
//--------------------------------------------------------------------
vvImage::vvImage() {
- mVtkImages.resize(0);
+ mVtkImages.resize(0);
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
vvImage::~vvImage() {
- for (unsigned int i = 0; i < mVtkImages.size(); i++) {
- if (mVtkImages[i] != NULL)
- mVtkImages[i]->Delete();
- }
+ for (unsigned int i = 0; i < mVtkImages.size(); i++) {
+ if (mVtkImages[i] != NULL)
+ mVtkImages[i]->Delete();
+ }
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
void vvImage::SetImage(std::vector images) {
- for (unsigned int i = 0; i < mVtkImages.size(); i++) {
- if (mVtkImages[i] != NULL)
- mVtkImages[i]->Delete();
- }
- mVtkImages.resize(0);
- for (unsigned int i = 0; i < images.size(); i++) {
- mVtkImages.push_back(images[i]);
- }
+ for (unsigned int i = 0; i < mVtkImages.size(); i++) {
+ if (mVtkImages[i] != NULL)
+ mVtkImages[i]->Delete();
+ }
+ mVtkImages.resize(0);
+ for (unsigned int i = 0; i < images.size(); i++) {
+ mVtkImages.push_back(images[i]);
+ }
}
//--------------------------------------------------------------------
//--------------------------------------------------------------------
void vvImage::AddImage(vtkImageData* image) {
- mVtkImages.push_back(image);
+ mVtkImages.push_back(image);
}
//--------------------------------------------------------------------
//--------------------------------------------------------------------
void vvImage::Init() {
- for (unsigned int i = 0; i < mVtkImages.size(); i++) {
- if (mVtkImages[i] != NULL)
- mVtkImages[i]->Delete();
- }
- mVtkImages.resize(0);
+ for (unsigned int i = 0; i < mVtkImages.size(); i++) {
+ if (mVtkImages[i] != NULL)
+ mVtkImages[i]->Delete();
+ }
+ mVtkImages.resize(0);
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
int vvImage::GetNumberOfSpatialDimensions() {
- int dim=GetNumberOfDimensions();
- if (IsTimeSequence())
- return dim-1;
- else
- return dim;
+ int dim=GetNumberOfDimensions();
+ if (IsTimeSequence())
+ return dim-1;
+ else
+ return dim;
}
//--------------------------------------------------------------------
-//
+
+
//--------------------------------------------------------------------
int vvImage::GetNumberOfDimensions() const {
- if (mVtkImages.size())
+ if (mVtkImages.size())
{
- int dimension = 2;
- int extent[6];
- mVtkImages[0]->GetWholeExtent(extent);
- if (extent[5] - extent[4] >= 1)
- dimension++;
- if (mVtkImages.size() > 1)
- dimension++;
- return dimension;
+ int dimension = 2;
+ int extent[6];
+ mVtkImages[0]->GetWholeExtent(extent);
+ if (extent[5] - extent[4] >= 1)
+ dimension++;
+ if (mVtkImages.size() > 1)
+ dimension++;
+ return dimension;
}
- return 0;
+ return 0;
}
+//--------------------------------------------------------------------
+
+
//--------------------------------------------------------------------
void vvImage::GetScalarRange(double* range)
{
- assert(mVtkImages.size());
- double * temp = mVtkImages[0]->GetScalarRange();
- range[0]=temp[0];range[1]=temp[1];
- for (unsigned int i=1;iGetScalarRange();
+ range[0]=temp[0];range[1]=temp[1];
+ for (unsigned int i=1;iGetScalarRange();
- if (temp[0] < range[0]) range[0]=temp[0];
- if (temp[1] > range[1]) range[1]=temp[1];
+ temp = mVtkImages[i]->GetScalarRange();
+ if (temp[0] < range[0]) range[0]=temp[0];
+ if (temp[1] > range[1]) range[1]=temp[1];
}
}
+//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
std::string vvImage::GetScalarTypeAsString() {
- return mVtkImages[0]->GetScalarTypeAsString();
+ // WARNING VTK pixel type different from ITK Pixel type
+ std::string vtktype = mVtkImages[0]->GetScalarTypeAsString();
+ if (vtktype == "unsigned char") return "unsigned_char";
+ if (vtktype == "unsigned short") return "unsigned_short";
+ if (vtktype == "unsigned int") return "unsigned_int";
+ return vtktype;
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
int vvImage::GetNumberOfScalarComponents() {
- return mVtkImages[0]->GetNumberOfScalarComponents();
+ return mVtkImages[0]->GetNumberOfScalarComponents();
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
int vvImage::GetScalarSize() {
- return mVtkImages[0]->GetScalarSize();
+ return mVtkImages[0]->GetScalarSize();
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
std::vector vvImage::GetSpacing() {
- std::vector spacing;
- int dim = this->GetNumberOfDimensions();
- for (int i = 0; i < dim; i++)
+ std::vector spacing;
+ int dim = this->GetNumberOfDimensions();
+ for (int i = 0; i < dim; i++)
{
- if (i == 3)
- spacing.push_back(1);
- else
- spacing.push_back(mVtkImages[0]->GetSpacing()[i]);
+ if (i == 3)
+ spacing.push_back(1);
+ else
+ spacing.push_back(mVtkImages[0]->GetSpacing()[i]);
}
- return spacing;
+ return spacing;
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
std::vector vvImage::GetOrigin() const {
- std::vector origin;
- int dim = this->GetNumberOfDimensions();
- for (int i = 0; i < dim; i++)
+ std::vector origin;
+ int dim = this->GetNumberOfDimensions();
+ for (int i = 0; i < dim; i++)
{
- if (i == 3)
- origin.push_back(0);
- else
- origin.push_back(mVtkImages[0]->GetOrigin()[i]);
+ if (i == 3)
+ origin.push_back(0);
+ else
+ origin.push_back(mVtkImages[0]->GetOrigin()[i]);
}
- return origin;
+ return origin;
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
std::vector vvImage::GetSize() {
- std::vector size0;
- int dim = this->GetNumberOfDimensions();
- for (int i = 0; i < dim; i++)
+ std::vector size0;
+ int dim = this->GetNumberOfDimensions();
+ for (int i = 0; i < dim; i++)
{
- if (i == 3)
- size0.push_back(mVtkImages.size());
- else
- size0.push_back(mVtkImages[0]->GetDimensions()[i]);
+ if (i == 3)
+ size0.push_back(mVtkImages.size());
+ else
+ size0.push_back(mVtkImages[0]->GetDimensions()[i]);
}
- return size0;
+ return size0;
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
unsigned long vvImage::GetActualMemorySize() {
- unsigned long size = 0;
- for (unsigned int i = 0; i < mVtkImages.size(); i++) {
- size += mVtkImages[i]->GetActualMemorySize();
- }
- return size;
+ unsigned long size = 0;
+ for (unsigned int i = 0; i < mVtkImages.size(); i++) {
+ size += mVtkImages[i]->GetActualMemorySize();
+ }
+ return size;
}
//--------------------------------------------------------------------
@@ -216,6 +228,7 @@ bool vvImage::IsScalarTypeInteger() {
}
//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
bool vvImage::IsScalarTypeInteger(int t) {
if ((t == VTK_BIT) ||