X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=filters%2FclitkImageFillRegionGenericFilter.txx;h=817ef8f3660aea593151a07f57ae8269495c616c;hb=711d2abc875d5e997b5cdbf762ca5c7c67df6719;hp=4d81f0e8b947408b220b48c886dcef5284103951;hpb=931a42358442f4ee4f314613c991c838d4b4e3b7;p=clitk.git

diff --git a/filters/clitkImageFillRegionGenericFilter.txx b/filters/clitkImageFillRegionGenericFilter.txx
index 4d81f0e..817ef8f 100644
--- a/filters/clitkImageFillRegionGenericFilter.txx
+++ b/filters/clitkImageFillRegionGenericFilter.txx
@@ -1,15 +1,20 @@
-/*-------------------------------------------------------------------------
-                                                                                
-  Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
-  l'Image). All rights reserved. See Doc/License.txt or
-  http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details.
-                                                                                
+/*=========================================================================
+  Program:   vv                     http://www.creatis.insa-lyon.fr/rio/vv
+
+  Authors belong to:
+  - University of LYON              http://www.universite-lyon.fr/
+  - Léon Bérard cancer center       http://oncora1.lyon.fnclcc.fr
+  - CREATIS CNRS laboratory         http://www.creatis.insa-lyon.fr
+
   This software is distributed WITHOUT ANY WARRANTY; without even
   the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
-  PURPOSE.  See the above copyright notices for more information.
-                                                                             
-  -------------------------------------------------------------------------*/
+  PURPOSE.  See the copyright notices for more information.
+
+  It is distributed under dual licence
 
+  - BSD        See included LICENSE.txt file
+  - CeCILL-B   http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+======================================================================-====*/
 #ifndef CLITKIMAGEFILLREGIONGENERICFILTER_TXX
 #define CLITKIMAGEFILLREGIONGENERICFILTER_TXX
 
@@ -17,130 +22,7 @@
  * @file   clitkImageFillRegionGenericFilter.txx
  * @author Cristina Gimenez <cristina.gs@gmail.com>
  * @date   9 August 2006
- * 
+ *
  -------------------------------------------------*/
 
-//--------------------------------------------------------------------
-template<unsigned int Dim>
-void ImageFillRegionGenericFilter::Update_WithDim() { 
-#define TRY_TYPE(TYPE)							\
-  if (IsSameType<TYPE>(mPixelTypeName)) { Update_WithDimAndPixelType<Dim, TYPE>(); return; } 
-  // TRY_TYPE(signed char);
-  // TRY_TYPE(uchar);
-  TRY_TYPE(short);
-  //TRY_TYPE(ushort);
-  // TRY_TYPE(int);
-  //   TRY_TYPE(unsigned int); 
-  TRY_TYPE(float);
-  // TRY_TYPE(double);
-#undef TRY_TYPE
-
-  std::string list = CreateListOfTypes<uchar, short, ushort, int, uint, float, double>();
-  std::cerr << "Error, I don't know the type '" << mPixelTypeName << "' for the input image '"
-	    << mInputFilenames[0] << "'." << std::endl << "Known types are " << list << std::endl;
-  exit(0);
-}
-//--------------------------------------------------------------------
-
-//--------------------------------------------------------------------
-template<unsigned int Dim, class PixelType>
-void ImageFillRegionGenericFilter::Update_WithDimAndPixelType() {
-
-  // Spheric region
-  if (mSphericRegion) return Update_WithDimAndPixelType_SphericRegion<Dim,PixelType>();
-
-  // Read input
-  typedef itk::Image<PixelType,Dim> ImageType;
-  typename ImageType::Pointer input = GetInput<ImageType>(0);
-
-  // Get pixel value in correct type
-  PixelType value = PixelTypeDownCast<double, PixelType>(mPixelValue); 
-
-  // Get region
-  typedef typename ImageType::RegionType RegionType;
-  typedef typename ImageType::SizeType SizeType;
-  typedef typename ImageType::IndexType IndexType;
-  RegionType region;
-  SizeType size;
-  IndexType start;
-  for(unsigned int i=0; i<Dim; i++) {
-    size[i] = mSize[i];
-    start[i] = mStart[i];
-  }
-  region.SetSize(size);
-  region.SetIndex(start);
-
-  // Build iterator
-  typedef itk::ImageRegionIterator<ImageType> IteratorType;
-  IteratorType it(input, region);
-  it.GoToBegin();
-  while (!it.IsAtEnd()) {
-    it.Set(value);
-    ++it;
-  }
-
-  // Write results
-  SetNextOutput<ImageType>(input);
-}
-//--------------------------------------------------------------------
-
-//--------------------------------------------------------------------
-template<unsigned int Dim, class PixelType>
-void ImageFillRegionGenericFilter::Update_WithDimAndPixelType_SphericRegion() {
-
-  // Read input
-  typedef itk::Image<PixelType,Dim> ImageType;
-  //typename ImageType::Pointer input = clitk::readImage<ImageType>(mInputFilenames[0], mIOVerbose);
-  typename ImageType::Pointer input = GetInput<ImageType>(0);
-
-  // Get pixel value in correct type
-  PixelType value = PixelTypeDownCast<double, PixelType>(mPixelValue); 
-
-  // Centered?
-  if(m_IsCentered)
-    {
-      typename ImageType::SizeType size= input->GetLargestPossibleRegion().GetSize();
-      typename ImageType::SpacingType spacing= input->GetSpacing();
-      typename ImageType::PointType origin= input->GetOrigin();
-      mCenter.resize(Dim);
-      for (unsigned int i=0; i<Dim; i++)
-	mCenter[i]=origin[i]+(double)size[i]/2*spacing[i];
-    }
-
-  // Build iterator
-  typedef itk::ImageRegionIteratorWithIndex<ImageType> IteratorType;
-  IteratorType it(input, input->GetLargestPossibleRegion());
-  it.GoToBegin();
-
-  typename ImageType::PointType point; 
-  //typename itk::Vector<double, Dim> distance; 
-  typename ImageType::IndexType index;
-  //bool inside;
-  double distance;
-  
-  while (!it.IsAtEnd())
-    {    
-      //      inside=true;
-      index=it.GetIndex();
-      input->TransformIndexToPhysicalPoint(index, point);
-      distance=0.0;      
-      for(unsigned int i=0; i<Dim; i++)
-	distance+=powf( ( (mCenter[i]-point[i])/mRadius[i] ), 2);
-	
-      //  inside= ( (fabs(distance[i])<fabs(mRadius[i])) && inside );
-      // 	  distance[i]=mCenter[i]-point[i];
-      // 	  inside= ( (fabs(distance[i])<fabs(mRadius[i])) && inside );
-      //	}
-      
-      if (distance<1)
-	it.Set(value);
-      ++it;
-    }
-
-  // Write results
-  SetNextOutput<ImageType>(input);
-}
-
-//--------------------------------------------------------------------
-
 #endif  //#define CLITKIMAGEFILLREGIONGENERICFILTER_TXX