X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=filters%2FclitkMedianImageGenericFilter.txx;h=07ce074ba603882355a789e2809e1b1dd651e364;hb=77ee327ec2ae14e038106ccebea0f89774733f10;hp=696124c95749dfb5c97197718909a566524eacaa;hpb=b6cfdecc2f880a7015d8f5a73174a0361cfe7924;p=clitk.git

diff --git a/filters/clitkMedianImageGenericFilter.txx b/filters/clitkMedianImageGenericFilter.txx
index 696124c..07ce074 100644
--- a/filters/clitkMedianImageGenericFilter.txx
+++ b/filters/clitkMedianImageGenericFilter.txx
@@ -5,9 +5,9 @@
  * @file   clitkMedianImageGenericFilter.txx
  * @author Bharath Navalapakkam <Bharath.Navalpakkam@creatis.insa-lyon.fr>
  * @date   20 March 2010
- * 
- * @brief 
- * 
+ *
+ * @brief
+ *
  ===================================================*/
 
 // itk include
@@ -16,94 +16,91 @@
 
 namespace clitk
 {
-  
-  //--------------------------------------------------------------------
-  template<class args_info_type>
-  MedianImageGenericFilter<args_info_type>::MedianImageGenericFilter():
-    ImageToImageGenericFilter<Self>("MedianImage") {
-    InitializeImageType<2>();
-    InitializeImageType<3>();
-    InitializeImageType<4>();
-  }
-  //--------------------------------------------------------------------
-
-
-  //--------------------------------------------------------------------
-  template<class args_info_type>
-  template<unsigned int Dim>
-  void MedianImageGenericFilter<args_info_type>::InitializeImageType() {      
-    ADD_IMAGE_TYPE(Dim, char);
-    ADD_IMAGE_TYPE(Dim, uchar);
-    ADD_IMAGE_TYPE(Dim, short);
-    ADD_IMAGE_TYPE(Dim, int);
-    ADD_IMAGE_TYPE(Dim, float);
-    ADD_IMAGE_TYPE(Dim, double);
-    ADD_IMAGE_TYPE(Dim, unsigned short); 
-  }
-  //--------------------------------------------------------------------
-  
-
-  //--------------------------------------------------------------------
-  template<class args_info_type>
-  void MedianImageGenericFilter<args_info_type>::SetArgsInfo(const args_info_type & a) {
-    mArgsInfo=a;
-    SetIOVerbose(mArgsInfo.verbose_flag);  
-
-    if (mArgsInfo.input_given) {
-      SetInputFilename(mArgsInfo.input_arg);
-    }
-    if (mArgsInfo.output_given) {
-      SetOutputFilename(mArgsInfo.output_arg);
-    }
 
+//--------------------------------------------------------------------
+template<class args_info_type>
+MedianImageGenericFilter<args_info_type>::MedianImageGenericFilter():
+  ImageToImageGenericFilter<Self>("MedianImage")
+{
+  InitializeImageType<2>();
+  InitializeImageType<3>();
+  InitializeImageType<4>();
+}
+//--------------------------------------------------------------------
+
+
+//--------------------------------------------------------------------
+template<class args_info_type>
+template<unsigned int Dim>
+void MedianImageGenericFilter<args_info_type>::InitializeImageType()
+{
+  ADD_DEFAULT_IMAGE_TYPES(Dim);
+}
+//--------------------------------------------------------------------
+
+
+//--------------------------------------------------------------------
+template<class args_info_type>
+void MedianImageGenericFilter<args_info_type>::SetArgsInfo(const args_info_type & a)
+{
+  mArgsInfo=a;
+  SetIOVerbose(mArgsInfo.verbose_flag);
+
+  if (mArgsInfo.input_given) {
+    SetInputFilename(mArgsInfo.input_arg);
   }
-  //--------------------------------------------------------------------
-
-
-  //--------------------------------------------------------------------
-  // Update with the number of dimensions and the pixeltype
-  //--------------------------------------------------------------------
-  template<class args_info_type>
-  template<class InputImageType>
-  void 
-  MedianImageGenericFilter<args_info_type>::UpdateWithInputImageType()
-  {
-    // Reading input
-    typename InputImageType::Pointer input = this->template GetInput<InputImageType>(0);
-    // Typedef
-    typedef typename InputImageType::PixelType PixelType;
-
-    // typedef itk::Image<PixelType,InputImageType::ImageDimension> OutputImageType;
-
-    // Main filter   
-    typedef itk::Image<PixelType, InputImageType::ImageDimension> OutputImageType;
-    class  InputImageType::SizeType indexRadius;
-
-    // Filter
-    typedef itk::MedianImageFilter<InputImageType, OutputImageType> MedianImageFilterType; 
-    typename MedianImageFilterType::Pointer thresholdFilter=MedianImageFilterType::New();
-    thresholdFilter->SetInput(input);
-
-    indexRadius[0]=mArgsInfo.radius_arg[0];
-    indexRadius[1]=mArgsInfo.radius_arg[1];
-    indexRadius[2]=mArgsInfo.radius_arg[2];
-  
-    // indexRadius[0] = 1; 
-    // indexRadius[1] = 1;
-
-    thresholdFilter->SetRadius( indexRadius );  
-
-    typename OutputImageType::Pointer outputImage = thresholdFilter->GetOutput();
-    thresholdFilter->Update();
-     
-    // Write/Save results
-    this->template SetNextOutput<OutputImageType>(outputImage);   
+  if (mArgsInfo.output_given) {
+    SetOutputFilename(mArgsInfo.output_arg);
   }
-  
-  //--------------------------------------------------------------------
+
+}
+//--------------------------------------------------------------------
+
+
+//--------------------------------------------------------------------
+// Update with the number of dimensions and the pixeltype
+//--------------------------------------------------------------------
+template<class args_info_type>
+template<class InputImageType>
+void
+MedianImageGenericFilter<args_info_type>::UpdateWithInputImageType()
+{
+  // Reading input
+  typename InputImageType::Pointer input = this->template GetInput<InputImageType>(0);
+  // Typedef
+  typedef typename InputImageType::PixelType PixelType;
+
+  // typedef itk::Image<PixelType,InputImageType::ImageDimension> OutputImageType;
+
+  // Main filter
+  typedef itk::Image<PixelType, InputImageType::ImageDimension> OutputImageType;
+  typename InputImageType::SizeType indexRadius;
+
+  // Filter
+  typedef itk::MedianImageFilter<InputImageType, OutputImageType> MedianImageFilterType;
+  typename MedianImageFilterType::Pointer thresholdFilter=MedianImageFilterType::New();
+  thresholdFilter->SetInput(input);
+
+  indexRadius[0]=mArgsInfo.radius_arg[0];
+  indexRadius[1]=mArgsInfo.radius_arg[1];
+  indexRadius[2]=mArgsInfo.radius_arg[2];
+
+  // indexRadius[0] = 1;
+  // indexRadius[1] = 1;
+
+  thresholdFilter->SetRadius( indexRadius );
+
+  typename OutputImageType::Pointer outputImage = thresholdFilter->GetOutput();
+  thresholdFilter->Update();
+
+  // Write/Save results
+  this->template SetNextOutput<OutputImageType>(outputImage);
+}
+
+//--------------------------------------------------------------------
 
 }//end clitk
 
- 
+
 #endif //#define clitkMedianImageGenericFilter_txx