X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=itk%2FclitkBackProjectImageFilter.txx;h=fa8d2613fec8815c80ae08abc3046a4000f65c81;hb=a523f5be1e221995c0d4d29a0077b5e8b984c96d;hp=65ac8017d4cb98b2009b573f3de03afb07e694db;hpb=765020625fbc092d283e221e36c83e60a1844cb7;p=clitk.git diff --git a/itk/clitkBackProjectImageFilter.txx b/itk/clitkBackProjectImageFilter.txx index 65ac801..fa8d261 100644 --- a/itk/clitkBackProjectImageFilter.txx +++ b/itk/clitkBackProjectImageFilter.txx @@ -20,6 +20,7 @@ #include "clitkBackProjectImageFilter.h" #include "itkContinuousIndex.h" #include "vnl/vnl_math.h" +#include "itkLinearInterpolateImageFunction.h" namespace clitk { @@ -39,6 +40,8 @@ namespace clitk this->m_SourceToAxis = 1000.0; this->m_EdgePaddingValue = itk::NumericTraits::Zero;//density images this->m_RigidTransformMatrix.SetIdentity(); + this->m_PanelShift[0] = 0.; + this->m_PanelShift[1] = 0.; //Parameters for output this->m_OutputSpacing.Fill(1); @@ -187,7 +190,11 @@ namespace clitk template void BackProjectImageFilter +#if ( ( ITK_VERSION_MAJOR == 4 ) && ( ITK_VERSION_MINOR > 12 ) || ( ITK_VERSION_MAJOR > 4 )) + ::Initialize( void ) +#else ::Initialize( void ) throw (itk::ExceptionObject) +#endif { //Change the origin of the 2D input typename InputImageType::ConstPointer inputPtr=this->GetInput(); @@ -220,7 +227,7 @@ namespace clitk BackProjectImageFilter ::CalculateProjectionMatrix( void ) { - InputSpacingType inputSpacing=this->GetInput()->GetSpacing(); + //InputSpacingType inputSpacing=this->GetInput()->GetSpacing(); // Projection on YZ plane+pixelTrans itk::Matrix temp; @@ -299,13 +306,10 @@ namespace clitk //----------------------------------------------------------------------- template void - BackProjectImageFilter - ::ThreadedGenerateData( const OutputImageRegionType & outputRegionForThread, int threadId ) + BackProjectImageFilter::ThreadedGenerateData( const OutputImageRegionType & outputRegionForThread, itk::ThreadIdType threadId ) { //Projection pointer InputImageConstPointer inputPtr=this->GetInput(); - InputPixelType * beginPtr=const_cast(this->GetInput()->GetBufferPointer()); - InputPixelType * pp; //Volume pointer OutputImagePointer outputPTr= this->GetOutput(); @@ -324,9 +328,6 @@ namespace clitk iPoint.Fill(itk::NumericTraits::Zero); OutputIndexType oIndex; ContinuousInputIndexType iIndex; - InputSizeType inputSize=inputPtr->GetLargestPossibleRegion().GetSize(); - double dx,dy,dxm,dym; - int lx, ly; //Get the first output coordinate oIndex=iterator.GetIndex();//costly but only once a thread @@ -337,9 +338,13 @@ namespace clitk //Compute the first input coordinate (invert Y/X) homInputPoint= (m_ProjectionMatrix * homOutputPoint); - iPoint[0]=-homInputPoint[0]/homInputPoint[2]; - iPoint[1]=homInputPoint[1]/homInputPoint[2]; - + iPoint[0]=-homInputPoint[0]/homInputPoint[2] + m_PanelShift[0]; + iPoint[1]=homInputPoint[1]/homInputPoint[2] + m_PanelShift[1]; + + typedef itk::LinearInterpolateImageFunction< InputImageType, double > InterpolatorType; + typename InterpolatorType::Pointer interpolator = InterpolatorType::New(); + interpolator->SetInputImage(this->GetInput()); + //Run over all output voxels for (unsigned int i=0; iTransformPhysicalPointToContinuousIndex(iPoint, iIndex) ) - { - //Own (fast bilinear) interpolation - lx = (int)floor(iIndex[0]); dx = iIndex[0]-lx; dxm = 1.-dx; - ly = (int)floor(iIndex[1]); dy = iIndex[1]-ly; dym = 1.-dy; - pp = beginPtr + ly*inputSize[0]+lx; - value =static_cast( ( dxm * dym*(double)(*pp) - + dx * dym*(double)(*(pp+1)) - + dxm* dy *(double)(*(pp + inputSize[0])) - + dx * dy *(double)(*(pp + inputSize[0]+1))) ); - - } + if (m_ModifiedInput->TransformPhysicalPointToContinuousIndex(iPoint, iIndex) && interpolator->IsInsideBuffer(iIndex)) + value = interpolator->EvaluateAtContinuousIndex(iIndex); //Outside: padding value - else value=m_EdgePaddingValue; - + else + value=m_EdgePaddingValue; //Set it iterator.Set(value);