X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=lib%2FInterface_ManagerContour_NDimensions%2FwxContourMainFrame.cxx;h=33db75f8652b799e2e366ebc8186d9058709bb5e;hb=6afda9ffe8fc5ee4fd7d6fa2ae006a0c78b5b1d8;hp=5f3aeae73e9f417bf750f2296c57ea16961f447e;hpb=87001c540c1fbcdf21ea7f994d620c8341755848;p=creaContours.git diff --git a/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.cxx b/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.cxx index 5f3aeae..33db75f 100644 --- a/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.cxx +++ b/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.cxx @@ -140,10 +140,10 @@ void wxContourMainFrame::setVectImages(std::vector imgs) #elif defined(__GNUC__) std::string str_home(getenv("HOME")); #endif - std::string strCreaContourDataTmp = str_home + "/.creaContourDataTemp/"; - std::vector conceptNameVect; - std::vector conceptSizeVect; - notebook = this->createNotebook(); + std::string strCreaContourDataTmp = str_home + "/.creaContourDataTemp/"; + std::vector conceptNameVect; + std::vector conceptSizeVect; + notebook = this->createNotebook(); kernelManager = new KernelManagerContour( imgs , _datadir+"/data/" , strCreaContourDataTmp ); _instantPanel = new wxInstantChooserPanel( notebook, "Instant Chooser", true, false, "c" ); _theViewPanel = new wxContourViewPanel( kernelManager->getSourceImage(), notebook ); @@ -394,12 +394,17 @@ void wxContourMainFrame :: onCreateContourBullEye(wxPanel* panel ) } } -void wxContourMainFrame :: createContour( int typeContour ) +void wxContourMainFrame::createContour( int typeContour ) { //Creating the manualContourModel and including in the model manualBaseModel * manModelContour = kernelManager->factoryManualContourModel(typeContour); std::vector instantVector; _instantPanel->getInstant( instantVector ); + + std::vector tempVector; + getInstantVector( tempVector ); + manModelContour->SetLabel2( std::to_string(tempVector[1]) ); + std::string theName = kernelManager->createOutline(manModelContour, instantVector); /*std::vector instantVector; _instantPanel->getInstant( instantVector ); @@ -548,11 +553,17 @@ void wxContourMainFrame :: deleteContour( std::string theKeyName ) //JCP 21 - 11 - 08 } -void wxContourMainFrame::onDeleteContoursActSlice(){ +void wxContourMainFrame::onDeleteContoursActSlice() +{ //JCP 20-10-08 Undo redo implementation saveState(); //JCP 20-10-08 Undo redo implementation - deleteContours( (std::vector)_theViewPanel->getSceneManager()->GetlstContoursNameActualSlice() ); + + std::vector tempVector; + getInstantVector( tempVector ); + deleteContours( getOutlinesName( tempVector[1] ) ); +// deleteContours( (std::vector)_theViewPanel->getSceneManager()->GetlstContoursNameActualSlice() ); + } void wxContourMainFrame::onDeleteAllContours(){ //JCP 20-10-08 Undo redo implementation @@ -1888,21 +1899,17 @@ void wxContourMainFrame::onSegmentationOneSlice(int isovalue,int sampling,int me void wxContourMainFrame::SegmentationOneSlice( int x, int y, int z, int isovalue, int sampling, int method ) { -printf("EED wxContourMainFrame::SegmentationOneSlice Start\n"); int typeofcontour = 1; //--Extracting Contour - //vtkImageData *imagedata = _theViewPanel->getSceneManager()->GetImageData(); vtkImageData *imagedata = getImageData(); -// double *range = imagedata->GetScalarRange(); -// double thr = 1; vtkImageReslice *imageReslice = vtkImageReslice::New(); //EED -// double spc[3]; -// imagedata->GetSpacing(spc); -// x = x*spc[0]; -// y = y*spc[1]; -// z = z*spc[3]; + double spc[3]; + imagedata->GetSpacing(spc); + x = x*spc[0]; + y = y*spc[1]; + z = z; //EED 2017-01-01 Migration VTK7 #if VTK_MAJOR_VERSION <= 5 @@ -1912,7 +1919,7 @@ printf("EED wxContourMainFrame::SegmentationOneSlice Start\n"); #endif imageReslice->SetInformationInput(imagedata); imageReslice->SetResliceAxesDirectionCosines(1,0,0, 0,1,0 ,0,0,1); - imageReslice->SetResliceAxesOrigin(0,0,z); + imageReslice->SetResliceAxesOrigin(0,0,z*spc[2]); imageReslice->SetOutputDimensionality(2); imageReslice->SetInterpolationModeToLinear(); @@ -1960,7 +1967,15 @@ printf("EED wxContourMainFrame::SegmentationOneSlice Start\n"); cpd->UpdateInformation(); vtkPolyDataConnectivityFilter* conn = vtkPolyDataConnectivityFilter::New( ); - conn->SetExtractionModeToClosestPointRegion( ); + +// conn->SetExtractionModeToPointSeededRegions(); +// conn->SetExtractionModeToCellSeededRegions(); +// conn->SetExtractionModeToSpecifiedRegions(); +// conn->SetExtractionModeToLargestRegion(); +// conn->SetExtractionModeToAllRegions(); + + conn->SetExtractionModeToClosestPointRegion(); + //conn->SetMaxRecursionDepth( 3000 ); //EED 2017-01-01 Migration VTK7 @@ -1985,12 +2000,15 @@ printf("EED wxContourMainFrame::SegmentationOneSlice Start\n"); cpd2->UpdateInformation(); vtkStripper* vtkstripper = vtkStripper::New( ); +vtkstripper->SetJoinContiguousSegments(true); vtkstripper->SetMaximumLength(20000); //EED 2017-01-01 Migration VTK7 #if VTK_MAJOR_VERSION <= 5 vtkstripper->SetInput( cpd2->GetOutput() ); #else vtkstripper->SetInputData( cpd2->GetOutput() ); +// vtkstripper->SetInputData( cntVTK->GetOutput() ); + #endif vtkstripper->Update(); vtkstripper->UpdateInformation(); @@ -2015,24 +2033,19 @@ myfile << "-------------------------------------\n"; polyDataResult->GetLines()->Print(myfile); myfile.close(); */ - - cntVTK -> Delete(); - cpd2 -> Delete(); - cpd -> Delete(); - conn -> Delete(); - + cntVTK -> Delete(); + cpd2 -> Delete(); + cpd -> Delete(); + conn -> Delete(); //--Calculating control points - std::vector vecX; std::vector vecY; std::vector vecZ; - std::vector vecCtrlPointX; std::vector vecCtrlPointY; std::vector vecCtrlPointZ; - printf("EED wxContourMainFrame::SegmentationOneSlice GetNumberOfLines=%d \n",polyDataResult->GetNumberOfLines() ); int numberOfPointsInCell; @@ -2049,84 +2062,90 @@ printf("EED wxContourMainFrame::SegmentationOneSlice PrintSelf \n"); polyDataResult->PrintSelf( std::cout, vtkIndent(0) ); + if (polyDataResult->GetNumberOfCells()>0) + { + double *p; + printf("EED wxContourMainFrame::SegmentationOneSlice A \n"); + vtkCell* vtkcell = polyDataResult->GetCell( 0 ); + printf("EED wxContourMainFrame::SegmentationOneSlice B \n"); + // int ii,size=polyDataResult->GetNumberOfPoints(); + int ii,size=vtkcell->GetNumberOfPoints(); + printf("EED wxContourMainFrame::SegmentationOneSlice C \n"); + int id; + for (ii=1;ii<=size;ii++) + { + // id = polyDataResult->GetLines()->GetData()->GetValue(ii); + // p = polyDataResult->GetPoint(id); + p = vtkcell->GetPoints()->GetPoint(ii); - double *p; - int ii,size=polyDataResult->GetNumberOfPoints(); - int id; - for (ii=1;ii<=size;ii++) - { - id = polyDataResult->GetLines()->GetData()->GetValue(ii); - p = polyDataResult->GetPoint(id); -printf("EED wxContourMainFrame::SegmentationOneSlice (%d) id=%d px=%f py=%f\n",ii,id, p[0],p[1]); -// double x=p[0]; -// double y=p[1]; - vecX.push_back( p[0] ); - vecY.push_back( p[1] ); -//EED 2017-12-16 - vecZ.push_back( -900 ); -// vecZ.push_back( p[2] ); - } - + printf("EED wxContourMainFrame::SegmentationOneSlice (%d) id=%d px=%f py=%f\n",ii,id, p[0],p[1]); + // double x=p[0]; + // double y=p[1]; + vecX.push_back( p[0] ); + vecY.push_back( p[1] ); + //EED 2017-12-16 + vecZ.push_back( -900 ); + // vecZ.push_back( p[2] ); + } - ExtractControlPoints2D *extractcontrolpoints2d = new ExtractControlPoints2D(); - extractcontrolpoints2d->SetContour( &vecX , &vecY , &vecZ ); + ExtractControlPoints2D *extractcontrolpoints2d = new ExtractControlPoints2D(); + extractcontrolpoints2d->SetContour( &vecX , &vecY , &vecZ ); -//PROOFS - /*if (methodRadiobox->GetSelection()==0){ - extractcontrolpoints2d->GetInitialControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); - } - if (methodRadiobox->GetSelection()==1){ - extractcontrolpoints2d->GetControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); - } - if (methodRadiobox->GetSelection()==2){ - extractcontrolpoints2d->SetSamplingControlPoints( sampling ); - extractcontrolpoints2d->GetSamplingControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); - }*/ + //PROOFS + /*if (methodRadiobox->GetSelection()==0){ + extractcontrolpoints2d->GetInitialControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); + } + if (methodRadiobox->GetSelection()==1){ + extractcontrolpoints2d->GetControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); + } + if (methodRadiobox->GetSelection()==2){ + extractcontrolpoints2d->SetSamplingControlPoints( sampling ); + extractcontrolpoints2d->GetSamplingControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); + }*/ - if (method==0) - { - extractcontrolpoints2d->GetInitialControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); - } else if (method==1){ - extractcontrolpoints2d->GetControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); - } else if (method==2){ - extractcontrolpoints2d->SetSamplingControlPoints( sampling ); - extractcontrolpoints2d->GetSamplingControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); - } + if (method==0) + { + extractcontrolpoints2d->GetInitialControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); + } else if (method==1){ + extractcontrolpoints2d->GetControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); + } else if (method==2){ + extractcontrolpoints2d->SetSamplingControlPoints( sampling ); + extractcontrolpoints2d->GetSamplingControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); + } - //--Adding contour to the system - std::vector actualInstantVector; - _instantPanel->getInstant( actualInstantVector ); - actualInstantVector[1]=z; + //--Adding contour to the system + std::vector actualInstantVector; + _instantPanel->getInstant( actualInstantVector ); + actualInstantVector[1]=z; - int j,sizeCtrPt = vecCtrlPointX.size(); - manualBaseModel *manModelContour = kernelManager->factoryManualContourModel( typeofcontour ); -printf("EED wxContourMainFrame::SegmentationOneSlice sizeCtrPt=%d %d %d\n" , sizeCtrPt - , ((sizeCtrPt/100)+1)*100 *2 - , manModelContour->GetNumberOfPointsSpline() - ); - manModelContour->SetNumberOfPointsSpline( ((sizeCtrPt/100)+1)*100 *2 ); - if (sizeCtrPt>=3) - { - for (j=0 ; jAddPoint( vecCtrlPointX[j] , vecCtrlPointY[j] , vecCtrlPointZ[j] ); - } // for - std::string theName; - //theName = _modelManager->createOutline( manModelContour, actualInstantVector ); - theName = kernelManager->createOutline( manModelContour, actualInstantVector ); - bool addedModel = theName.compare("") != 0; - if( addedModel ) + int j,sizeCtrPt = vecCtrlPointX.size(); + manualBaseModel *manModelContour = kernelManager->factoryManualContourModel( typeofcontour ); + manModelContour->SetNumberOfPointsSpline( ((sizeCtrPt/100)+1)*100 *2 ); + manModelContour->SetLabel2( std::to_string(z) ); + if (sizeCtrPt>=3) { - double spc[3];//Si no hay imagen pero hay contornos que spacing se pone por default - _theViewPanel->getSpacing(spc); - //Adding the manualContourControler to interface objects structure - //Adding the manualViewContour to interface objects structure - //_theViewPanel->getSceneManager()->setControlActiveStateOfALL( false );//This call is being done here because if the ROI is created underneath the previously created ROIS will still be active. - _theViewPanel->configureViewControlTo(theName, manModelContour, spc, typeofcontour); - //_theViewPanel->getSceneManager()->configureViewControlTo( theName, manModelContour,spc, typeofcontour ) ; - } // if addedModel - } // if sizeCtrPt -printf("EED wxContourMainFrame::SegmentationOneSlice End\n"); + for (j=0 ; jAddPoint( vecCtrlPointX[j] / spc[0], vecCtrlPointY[j] / spc[1], vecCtrlPointZ[j] ); + } // for + std::string theName; + //theName = _modelManager->createOutline( manModelContour, actualInstantVector ); + theName = kernelManager->createOutline( manModelContour, actualInstantVector ); + bool addedModel = theName.compare("") != 0; + if( addedModel ) + { + double spc[3];//Si no hay imagen pero hay contornos que spacing se pone por default + _theViewPanel->getSpacing(spc); + //Adding the manualContourControler to interface objects structure + //Adding the manualViewContour to interface objects structure + //_theViewPanel->getSceneManager()->setControlActiveStateOfALL( false );//This call is being done here because if the ROI is created underneath the previously created ROIS will still be active. + _theViewPanel->configureViewControlTo(theName, manModelContour, spc, typeofcontour); + //_theViewPanel->getSceneManager()->configureViewControlTo( theName, manModelContour,spc, typeofcontour ) ; + } // if addedModel + } // if sizeCtrPt + } // if NumberOfCells > 0 + +printf("EED wxContourMainFrame::SegmentationOneSlice End\n"); } int wxContourMainFrame::GetImageDataSizeZ() @@ -2146,12 +2165,12 @@ void wxContourMainFrame::onSegmentationAllSlice(int minZ,int maxZ,int isovalue,i //JCP 20-10-08 Undo redo implementation wxBusyCursor wait; - int x = _theViewPanel->GetX(); - int y = _theViewPanel->GetY(); - int z; - double porcent; - wxString tmpString; - double totalZ = maxZ-minZ+1; + int x = _theViewPanel->GetX(); + int y = _theViewPanel->GetY(); + int z; + double porcent; + wxString tmpString; + double totalZ = maxZ-minZ+1; for( z=minZ ; z<=maxZ ; z++ ) { porcent = 100.0* (z-minZ)/totalZ; @@ -2390,18 +2409,44 @@ void wxContourMainFrame::onInterpolation(bool interpolate) RefreshInterface(); } +void wxContourMainFrame::onBeforeAfterContour(bool before,bool after) +{ + _theViewPanel->onBeforeAfterContour(before,after); + RefreshInterface(); +} + +void wxContourMainFrame::onJumpSlice(int step, int shift) +{ + std::vector tempVector; + _instantPanel->getInstant( tempVector ); + int ss = abs(step); + int pos = tempVector[1]; + int maxZ = interfMainPanel::getInstance()->GetImageDataSizeZ(); + pos=(pos/ss)*ss+step+shift; + if ((pos>=0) && (possetInstant( tempVector ); + RefreshInterface(); + } // if pos +} + +void wxContourMainFrame::onShowTextContour(bool show) +{ + _theViewPanel->onShowTextContour(show); + RefreshInterface(); +} + void wxContourMainFrame::onChangeInstant(std::string name,int actual) { _instantPanel->setConceptValue( name, actual ); } - void wxContourMainFrame::resetAppend() { kernelManager->resetAppend(); } - void wxContourMainFrame::onSpreadAdd() { std::vector vecX; @@ -2512,7 +2557,6 @@ void wxContourMainFrame::onSpreadGo(int type) void wxContourMainFrame::getInstantVector(std::vector& tempVector) { - printf("wxContourMainFrame::getInstantVector Warning!! Methon not implemented ... \n"); _instantPanel->getInstant( tempVector ); }