X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=lib%2FInterface_ManagerContour_NDimensions%2FwxContourMainFrame.cxx;h=5f3aeae73e9f417bf750f2296c57ea16961f447e;hb=87001c540c1fbcdf21ea7f994d620c8341755848;hp=2077380295561cc75bb6d6ec772a039e30ee2a51;hpb=d04890ea37126df81e4dc9368c0f4e927c592a39;p=creaContours.git diff --git a/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.cxx b/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.cxx index 2077380..5f3aeae 100644 --- a/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.cxx +++ b/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.cxx @@ -70,13 +70,13 @@ char wxContourMainFrame::COPY = 'C'; // _gridPanel = NULL; // _drawToolsPanel = NULL; // _operationsToolsPanel = NULL; - //_autoFormsPanel = NULL; + //_autoFormsPanel = NULL; // _standardToolsPanel = NULL; // _editionToolsPanel = NULL; // _listViewPanel = NULL; // _sceneManager = NULL; - //_actualInstant = NULL; - _numberOfVariablesStatistics = 6+1; + //_actualInstant = NULL; + _numberOfVariablesStatistics= 6+1; _refLineControl = NULL; _refLineModel = NULL; @@ -94,10 +94,11 @@ char wxContourMainFrame::COPY = 'C'; _viewThresholdImage = NULL; _viewThresholdImagePanel = NULL; _viewColorLayerImagePanel = NULL; + _frameShowResultImages = NULL; } - wxContourMainFrame :: wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector images, long style,std::string datadir) + wxContourMainFrame::wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector images, long style,std::string datadir) : wxPanel(parent, id, pos, size, style) { m_mgr.SetManagedWindow(this); @@ -123,7 +124,7 @@ char wxContourMainFrame::COPY = 'C'; inredo = 0; inundo = 0; _pannew = interfMainPanel::getInstance(this,datadir+"/data/Icons");//, eventHandler); - _performingOperation = new PerformingOperation(); + _performingOperation = new PerformingOperation(); if(images.size() > 0) { this->setVectImages(images); @@ -133,42 +134,29 @@ char wxContourMainFrame::COPY = 'C'; void wxContourMainFrame::setVectImages(std::vector imgs) { - _images = imgs; - - #if defined(__GNUC__) + #if defined(_WIN32) + std::string str_home(getenv("USERPROFILE")); + #elif defined(__GNUC__) std::string str_home(getenv("HOME")); - #elif defined(_WIN32) - std::string str_home(getenv("USERPROFILE")); #endif - std::string strCreaContourDataTmp = str_home + "/.creaContourDataTemp/"; - + std::string strCreaContourDataTmp = str_home + "/.creaContourDataTemp/"; std::vector conceptNameVect; std::vector conceptSizeVect; - notebook = this->createNotebook(); - - - kernelManager = new KernelManagerContour( imgs , _datadir+"/data/" , strCreaContourDataTmp ); - - - _instantPanel = new wxInstantChooserPanel( notebook, "Instant Chooser", true, false, "c" ); - _theViewPanel = new wxContourViewPanel( kernelManager->getSourceImage(), notebook ); - + kernelManager = new KernelManagerContour( imgs , _datadir+"/data/" , strCreaContourDataTmp ); + _instantPanel = new wxInstantChooserPanel( notebook, "Instant Chooser", true, false, "c" ); + _theViewPanel = new wxContourViewPanel( kernelManager->getSourceImage(), notebook ); //------------------------------------------------------------- kernelManager->getConceptsInformation(conceptNameVect, conceptSizeVect); _instantPanel->addConcepts(conceptNameVect, conceptSizeVect); - - double val = _theViewPanel->getCurrentDeep(); _instantPanel->setConceptValue( "Axe Depth", (int)val ); //JCP _instantPanel->setConceptValue("time", num de imagenes); ConceptDataWrap * data = _instantPanel->getConceptDataOf( "Axe Depth" ); //*******************changeInstant(); _theViewPanel->setVerticalConcept( "Axe Depth", data->getMinValue(), data->getMaxValue(), data->getMinShowedValue(), data->getMaxShowedValue(), data->getActualValue() ); - this->configurePanels( ); - } @@ -246,17 +234,13 @@ void wxContourMainFrame::setVectImages(std::vector imgs) notebook->AddPage( _theViewPanel, wxT(" View ") ); m_mgr.Update(); } - - if( configured ) { notebook->AddPage( _instantPanel, wxT("Instant Page") ); m_mgr.Update(); } - m_mgr.AddPane(notebook, wxAuiPaneInfo().Name(wxT("notebook_content")).CenterPane().PaneBorder(false)); m_mgr.Update(); - SetMinSize(wxSize(300,300)); m_mgr.Update(); return configured; @@ -337,20 +321,25 @@ void wxContourMainFrame::onCreateContourSpline( ){ createContour( 1 ); } -void wxContourMainFrame::onCreateContourRectangle( ){ + +void wxContourMainFrame::onCreateContourRectangle( ) +{ //JCP 20-10-08 Undo redo implementation saveState(); //JCP 20-10-08 Undo redo implementation createContour( 2 ); } -void wxContourMainFrame::onCreateContourCircle( ){ + +void wxContourMainFrame::onCreateContourCircle( ) +{ //JCP 20-10-08 Undo redo implementation saveState(); //JCP 20-10-08 Undo redo implementation createContour( 3 ); } -void wxContourMainFrame::onCreateContourLine( ){ +void wxContourMainFrame::onCreateContourLine( ) +{ //JCP 20-10-08 Undo redo implementation saveState(); //JCP 20-10-08 Undo redo implementation @@ -358,7 +347,8 @@ void wxContourMainFrame::onCreateContourLine( ){ } // RaC 09-09 -------------------------------------- -void wxContourMainFrame::onCreateContourPoints( ){ +void wxContourMainFrame::onCreateContourPoints( ) +{ //JCP 20-10-08 Undo redo implementation saveState(); //JCP 20-10-08 Undo redo implementation @@ -367,7 +357,8 @@ void wxContourMainFrame::onCreateContourPoints( ){ // RaC 09-09 -------------------------------------- // RaC 10-09 -------------------------------------- -void wxContourMainFrame::onCreateContourPolygon( ){ +void wxContourMainFrame::onCreateContourPolygon( ) +{ //JCP 20-10-08 Undo redo implementation saveState(); //JCP 20-10-08 Undo redo implementation @@ -402,15 +393,14 @@ void wxContourMainFrame :: onCreateContourBullEye(wxPanel* panel ) _theViewPanel->getSceneManager()->configureViewControlTo( theName, manModelContour,spc , 4) ; } } + void wxContourMainFrame :: createContour( int typeContour ) { //Creating the manualContourModel and including in the model manualBaseModel * manModelContour = kernelManager->factoryManualContourModel(typeContour); - std::vector instantVector; _instantPanel->getInstant( instantVector ); std::string theName = kernelManager->createOutline(manModelContour, instantVector); - /*std::vector instantVector; _instantPanel->getInstant( instantVector ); std::string theName; @@ -424,9 +414,9 @@ void wxContourMainFrame :: createContour( int typeContour ) //Adding the manualViewContour to interface objects structure //_sceneManager->setControlActiveStateOfALL( false );//This call is being done here because if the ROI is created underneath the previously created ROIS will still be active. _theViewPanel->getSceneManager()->configureViewControlTo( theName, manModelContour,spc , typeContour) ; - } - + } // if addedModel } + manualBaseModel * wxContourMainFrame::factoryManualContourModel(wxPanel* panel){ manualContourModelBullEye *manModelContourBullEye = new manualContourModelBullEye(); @@ -459,13 +449,15 @@ manualBaseModel * wxContourMainFrame::factoryManualContourModel(wxPanel* panel){ return manModelContour; } -void wxContourMainFrame :: saveState(){ +void wxContourMainFrame :: saveState() +{ std::string temp = kernelManager->saveState(); saveFileWithContours(temp); } -void wxContourMainFrame::onDeleteContour(){ +void wxContourMainFrame::onDeleteContour() +{ //JCP 20-10-08 Undo redo implementation saveState(); //JCP 20-10-08 Undo redo implementation @@ -526,7 +518,8 @@ void wxContourMainFrame :: deleteContours( std::vector keyNamesVec } } -void wxContourMainFrame :: deleteContour( std::string theKeyName ){ +void wxContourMainFrame :: deleteContour( std::string theKeyName ) +{ /* manualContourModel * cModel; manualViewBaseContour * cViewer; @@ -615,17 +608,20 @@ void wxContourMainFrame::deleteAllContours(){ JCP --08-09-2008 */ } -void wxContourMainFrame::setConceptValue( std::string name, int value ){ +void wxContourMainFrame::setConceptValue( std::string name, int value ) +{ _instantPanel->setConceptValue(name, value); } -ConceptDataWrap* wxContourMainFrame::getLastConceptData(){ +ConceptDataWrap* wxContourMainFrame::getLastConceptData() +{ return _instantPanel->getLastConceptData(); } -bool wxContourMainFrame::getIfConceptCheckedAt( std::string name, int pos ){ +bool wxContourMainFrame::getIfConceptCheckedAt( std::string name, int pos ) +{ return _instantPanel->getIfConceptCheckedAt( name, pos ); } @@ -674,11 +670,10 @@ void wxContourMainFrame::changeInstant() std::vector instantVect; _instantPanel->getInstant( instantVect ); int actualSlice = instantVect[1]; - kernelManager->setInstant(instantVect); - // Refresh Mask image - if(_viewMaskImage!=NULL){ + if(_viewMaskImage!=NULL) + { _viewMaskImage->SetZ(actualSlice); if (_viewMaskImagePanel->IsVisible()==true) { @@ -686,17 +681,16 @@ void wxContourMainFrame::changeInstant() getMaskValue(&mask,&value, _contourGroup , 0, -1, -1); _viewMaskImage->onThreshold(); } - } - + } // if _viewMaskImage // Refresh Threshold image - if(_viewThresholdImage!=NULL){ + if(_viewThresholdImage!=NULL) + { _viewThresholdImage->SetZ(actualSlice); - if (_viewThresholdImagePanel->IsVisible()==true){ + if (_viewThresholdImagePanel->IsVisible()==true) + { _viewThresholdImage->onThreshold(); } - } - - + } // if _viewThresholdImage updateInstantOutlines(); updateInstantImageData(); updateInstantAxes(); @@ -704,7 +698,7 @@ void wxContourMainFrame::changeInstant() -void wxContourMainFrame :: updateInstantOutlines() +void wxContourMainFrame::updateInstantOutlines() { _theViewPanel->removeSceneContours(); _theViewPanel->addNameWrapperToScene(); @@ -715,10 +709,13 @@ void wxContourMainFrame :: updateInstantOutlines() //} } -int wxContourMainFrame::getNamesWrappingSize(){ +int wxContourMainFrame::getNamesWrappingSize() +{ return kernelManager->getNamesWrappingSize(); } -std::string wxContourMainFrame::getNameWrapping(int i){ + +std::string wxContourMainFrame::getNameWrapping(int i) +{ return kernelManager->getNameWrapping(i); } @@ -728,13 +725,14 @@ void wxContourMainFrame::updateInstantImageData() _instantPanel->getInstant(inst); vtkImageData* img = kernelManager->getImageAtInstant(inst); - if(img!=NULL){ + if(img!=NULL) + { _theViewPanel->changeImage(img); showAxis(false); }else{ int z = _instantPanel->getConceptDataOf("Axe Depth")->getActualValue(); _theViewPanel->setImageSlice(z); - } + } // if img } void wxContourMainFrame::updateInstantAxes() @@ -750,7 +748,6 @@ void wxContourMainFrame::onChangeDeep(int val){ void wxContourMainFrame::onCopy(){ std::vector currentSelection = _theViewPanel->getSelectedObjects(); - std::vector tempVector; _instantPanel->getInstant( tempVector ); _performingOperation->reset(); @@ -759,9 +756,8 @@ void wxContourMainFrame::onCopy(){ _performingOperation->setKeyNamesOperationElems( currentSelection ); } -void wxContourMainFrame::onPaste(){ - - +void wxContourMainFrame::onPaste() +{ char theStartCommand = _performingOperation->getStartCommand(); if ( theStartCommand == COPY ) { @@ -779,7 +775,9 @@ void wxContourMainFrame::onPaste(){ } } } -void wxContourMainFrame::onUndo(){ + +void wxContourMainFrame::onUndo() +{ std::string filename; if(kernelManager->onUndoSaveFile(filename)){ saveFileWithContours(filename); @@ -848,111 +846,13 @@ void wxContourMainFrame :: createMirrorContourOf ( std::string anExistingKName, _theViewPanel->getSceneManager()->createCopyContourOf( anExistingKName, cloneName, manualModel , append ); } -//EED04 -void wxContourMainFrame ::loadState(std::string filename){ - +void wxContourMainFrame ::loadState(std::string filename) +{ deleteAllContours(); onLoadContours(filename,false); - - /* EED Borrame - char tmp[255]; - FILE *pFile=fopen(filename.c_str(),"r+"); - - fscanf(pFile,"%s",tmp); // --CreaContour-- - - fscanf(pFile,"%s",tmp); // Version - fscanf(pFile,"%s",tmp); // 1.0.3 || 1.0.2 || 1.0.1 || 1.0.0 - - deleteAllContours(); - - loadContours(pFile, false); - loadContours(pFile, true); - - fclose(pFile); - */ } -//EED03 -/*EED Borrame -void wxContourMainFrame::loadContours( FILE *pFile, bool staticContour ) -{ - char tmp[255]; - - if (staticContour==false) - { - fscanf(pFile,"%s",tmp); // ImageDimensions - fscanf(pFile,"%s",tmp); // X - fscanf(pFile,"%s",tmp); // Y - fscanf(pFile,"%s",tmp); // Z - - fscanf(pFile,"%s",tmp); // ImageSpacing - fscanf(pFile,"%s",tmp); // X - fscanf(pFile,"%s",tmp); // Y - fscanf(pFile,"%s",tmp); // Z - } - - fscanf(pFile,"%s",tmp); // NumberOfContours - fscanf(pFile,"%s",tmp); // ## - int numberOfContours = atoi(tmp); - - std::vector instantVector; - int typeContourModel; - manualBaseModel *manModelContour; - int typeView; - - int i; - for (i=0;ifactoryManualContourModel(typeContourModel); - manModelContour->Open(pFile); - - fscanf(pFile,"%s",tmp); // TypeView - fscanf(pFile,"%s",tmp); // ## - typeView = atoi(tmp); - - std::string theName; - theName = kernelManager->createOutline( manModelContour, instantVector ); - bool addedModel = theName.compare("") != 0; - if( addedModel ) - { - double spc[3];//Si no hay imagen pero hay contornos que spacing se pone por default - _theViewPanel->getSpacing(spc); - //Adding the manualContourControler to interface objects structure - //Adding the manualViewContour to interface objects structure - //_theViewPanel->getSceneManager()->setControlActiveStateOfALL( false );//This call is being done here because if the ROI is created underneath the previously created ROIS will still be active. - _theViewPanel->getSceneManager()->configureViewControlTo( theName, manModelContour,spc , typeView) ; - } - - if (staticContour==true) - { - Instant instant(&instantVector); - kernelManager->changeContourOfManager( theName , &instant ); - } - }// for numberOfContours -} -*/ - - void wxContourMainFrame::onLoad() { std::string fileNameContourROI = GetFileLocation(); @@ -960,7 +860,12 @@ void wxContourMainFrame::onLoad() if(GetFileLocation().empty()) { //------------------------------------------------------------------------------------------------------------ +//EED 2017-09-16 Migration wxWidgets 2.8 to 3.0 +#if wxMAJOR_VERSION <= 2 wxFileDialog dialog(NULL, _T("Choose a file"), _T(""), _T(""), _T("*.roi"), wxOPEN ); +#else + wxFileDialog dialog(NULL, _T("Choose a file"), _T(""), _T(""), _T("*.roi"), wxFD_OPEN ); +#endif if (dialog.ShowModal() == wxID_OK) { fileNameContourROI = (const char *)(dialog.GetPath().mb_str()); @@ -973,9 +878,7 @@ void wxContourMainFrame::onLoad() void wxContourMainFrame::SetZForAllContours(int pz) { - //-- Normal Contours - std::vector< std::string > lstNameThings; int i,sizeLstNameThings; int ii,sizeLstPoints; @@ -1008,16 +911,11 @@ printf("EED wxContourMainFrame::SetZForAllContours contour=%d \n", i ); }// for i list of static things } - - void wxContourMainFrame::onLoadContours(std::string fileNameContourROI, bool interactiveInterface) { char tmp[255]; char tmpD[255]; - FILE *pFile =fopen(fileNameContourROI.c_str(),"r+"); - - //CMRU 03-09-09- ---------------------------------------------------------------------------------------------- if(pFile != NULL) { @@ -1036,17 +934,10 @@ void wxContourMainFrame::onLoadContours(std::string fileNameContourROI, bool int fscanf(pFileData,"%s",tmpD); // NumberOfContours fscanf(pFileData,"%s",tmpD); // # } - fscanf(pFile,"%s",tmp); // --CreaContour-- - fscanf(pFile,"%s",tmp); // Version fscanf(pFile,"%s",tmp); // 1.0.3 || 1.0.2 || 1.0.1 || 1.0.0 std::string version(tmp); - - -printf("EED wxContourMainFrame::onLoadContours version%s \n", version.c_str() ); - - //AD:02-06-09 _tmpReadFileTypeOfTransformation=-1; if (version=="1.0.3") @@ -1055,7 +946,6 @@ printf("EED wxContourMainFrame::onLoadContours version%s \n", version.c_str() ) openContours(pFile,pFileData,false); openContours(pFile,pFileData,true); //Load StaticContours } - if (version=="1.0.2") { //EED001 @@ -1065,7 +955,6 @@ printf("EED wxContourMainFrame::onLoadContours version%s \n", version.c_str() ) openContours(pFile,pFileData,true); // Load StaticContours SetZForAllContours(-900); } - //AD:02-06-09 else if (version=="1.0.1") { @@ -1084,18 +973,22 @@ printf("EED wxContourMainFrame::onLoadContours version%s \n", version.c_str() ) if(pFileData != NULL) { fclose(pFileData); - } + } // if } _theViewPanel->getSceneManager()->removeSceneContours(); changeInstant(); } - -void wxContourMainFrame::onImport(){ +void wxContourMainFrame::onImport() +{ std::string filename, filenamecontours; +//EED 2017-09-16 Migration wxWidgets 2.8 to 3.0 +#if wxMAJOR_VERSION <= 2 wxFileDialog dialog(NULL, _T("Choose a XML Osirix File"), _T(""), _T(""), _T("*.xml"), wxOPEN ); - +#else + wxFileDialog dialog(NULL, _T("Choose a XML Osirix File"), _T(""), _T(""), _T("*.xml"), wxFD_OPEN ); +#endif if (dialog.ShowModal() == wxID_OK) { filename = dialog.GetPath().mb_str(); @@ -1103,19 +996,25 @@ void wxContourMainFrame::onImport(){ if(filenamecontours.compare("") != 0){ onLoadContours(filenamecontours,true); - } - - } + } // if + } // if } -void wxContourMainFrame::onTest(){ + +void wxContourMainFrame::onTest() +{ std::string filename, filenamecontours; +//EED 2017-09-16 Migration wxWidgets 2.8 to 3.0 +#if wxMAJOR_VERSION <= 2 wxFileDialog dialog(NULL, _T("Choose a File"), _T(""), _T(""), _T("*.*"), wxOPEN ); +#else + wxFileDialog dialog(NULL, _T("Choose a File"), _T(""), _T(""), _T("*.*"), wxFD_OPEN ); +#endif if (dialog.ShowModal() == wxID_OK) { filename = dialog.GetPath().mb_str(); std::cout << "This is the filename: " << filename << std::endl; - } + } // if } @@ -1125,7 +1024,12 @@ void wxContourMainFrame::onSave(){ if(GetFileLocation().empty()) { //------------------------------------------------------------------------------------------------------------ +//EED 2017-09-16 Migration wxWidgets 2.8 to 3.0 +#if wxMAJOR_VERSION <= 2 wxFileDialog dialog(NULL, _T("Choose a file"), _T(""), _T(""), _T("*.roi"), wxSAVE ); +#else + wxFileDialog dialog(NULL, _T("Choose a file"), _T(""), _T(""), _T("*.roi"), wxFD_SAVE ); +#endif if (dialog.ShowModal() == wxID_OK) { std::string fileNameContourROI = (const char *)(dialog.GetPath().mb_str()); @@ -1466,14 +1370,16 @@ void wxContourMainFrame::openContours( FILE *pFile, FILE *pFileData, bool static } -void wxContourMainFrame::RefreshInterface(){ +void wxContourMainFrame::RefreshInterface() +{ changeInstant(); _theViewPanel->RefreshInterface(); //wxVtk2DBaseView *wxvtk2dbaseview = (wxVtk2DBaseView*)this->_theViewPanel->getWxVtkBaseView(); //wxvtk2dbaseview->Refresh(); } -vtkImageData* wxContourMainFrame::getImageData(){ +vtkImageData* wxContourMainFrame::getImageData() +{ return _theViewPanel->getImageData(); } @@ -1680,33 +1586,63 @@ printf("EED wxContourMainFrame::SegmentationOneSliceITK Skypping this code. No vtkMarchingContourFilter* cntVTK = vtkMarchingContourFilter::New( ); - cntVTK->SetInput( idata ); - cntVTK->SetNumberOfContours( 1 ); cntVTK->SetValue( 0, 255 ); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 + cntVTK->SetInput( idata ); cntVTK->Update( ); cntVTK->UpdateInformation(); +#else + cntVTK->SetInputData( idata ); +#endif vtkCleanPolyData* cpd = vtkCleanPolyData::New( ); + +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 cpd->SetInput( cntVTK->GetOutput( ) ); cpd->Update( ); cpd->UpdateInformation(); +#else + cpd->SetInputData( cntVTK->GetOutput( ) ); +#endif + vtkPolyDataConnectivityFilter* conn = vtkPolyDataConnectivityFilter::New( ); conn->SetExtractionModeToLargestRegion( ); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 conn->SetInput( cpd->GetOutput( ) ); conn->Update( ); conn->UpdateInformation(); +#else + conn->SetInputData( cpd->GetOutput( ) ); +#endif + vtkStripper* vtkstripper = vtkStripper::New( ); + +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 vtkstripper->SetInput( conn->GetOutput() ); vtkstripper->Update(); vtkstripper->UpdateInformation(); +#else + vtkstripper->SetInputData( conn->GetOutput() ); + cntVTK->Update(); +#endif vtkPolyData* polyDataResult = cntVTK->GetOutput(); //std::cout<<"Points "<GetNumberOfPoints()<Update( ); polyDataResult->UpdateInformation(); +#else + // .. +#endif //EED /* @@ -1952,6 +1888,7 @@ void wxContourMainFrame::onSegmentationOneSlice(int isovalue,int sampling,int me void wxContourMainFrame::SegmentationOneSlice( int x, int y, int z, int isovalue, int sampling, int method ) { +printf("EED wxContourMainFrame::SegmentationOneSlice Start\n"); int typeofcontour = 1; //--Extracting Contour //vtkImageData *imagedata = _theViewPanel->getSceneManager()->GetImageData(); @@ -1967,19 +1904,41 @@ void wxContourMainFrame::SegmentationOneSlice( int x, int y, int z, int isovalue // y = y*spc[1]; // z = z*spc[3]; +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 imageReslice->SetInput( imagedata ); +#else + imageReslice->SetInputData( imagedata ); +#endif imageReslice->SetInformationInput(imagedata); imageReslice->SetResliceAxesDirectionCosines(1,0,0, 0,1,0 ,0,0,1); imageReslice->SetResliceAxesOrigin(0,0,z); imageReslice->SetOutputDimensionality(2); imageReslice->SetInterpolationModeToLinear(); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 + // .. +#else + imageReslice->Update(); +#endif + imagedata = imageReslice->GetOutput(); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 imagedata->Update(); imagedata->UpdateInformation(); +#else + // .. +#endif vtkContourFilter* cntVTK = vtkContourFilter::New( ); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 cntVTK->SetInput( imagedata ); +#else + cntVTK->SetInputData( imagedata ); +#endif cntVTK->SetNumberOfContours( 1 ); //cntVTK->SetValue( 0, vmin ); @@ -1990,7 +1949,12 @@ void wxContourMainFrame::SegmentationOneSlice( int x, int y, int z, int isovalue cntVTK->UpdateInformation(); vtkCleanPolyData* cpd = vtkCleanPolyData::New( ); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 cpd->SetInput( cntVTK->GetOutput( ) ); +#else + cpd->SetInputData( cntVTK->GetOutput( ) ); +#endif cpd->ConvertLinesToPointsOff( ); cpd->Update( ); cpd->UpdateInformation(); @@ -1999,27 +1963,48 @@ void wxContourMainFrame::SegmentationOneSlice( int x, int y, int z, int isovalue conn->SetExtractionModeToClosestPointRegion( ); //conn->SetMaxRecursionDepth( 3000 ); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 conn->SetInput( cpd->GetOutput( ) ); +#else + conn->SetInputData( cpd->GetOutput( ) ); +#endif conn->SetClosestPoint( x, y, 0 ); conn->Update( ); conn->UpdateInformation(); vtkCleanPolyData* cpd2 = vtkCleanPolyData::New( ); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 cpd2->SetInput( conn->GetOutput( ) ); +#else + cpd2->SetInputData( conn->GetOutput( ) ); +#endif cpd2->Update(); cpd2->UpdateInformation(); vtkStripper* vtkstripper = vtkStripper::New( ); + vtkstripper->SetMaximumLength(20000); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 vtkstripper->SetInput( cpd2->GetOutput() ); +#else + vtkstripper->SetInputData( cpd2->GetOutput() ); +#endif vtkstripper->Update(); vtkstripper->UpdateInformation(); vtkPolyData* polyDataResult = vtkstripper->GetOutput(); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 polyDataResult->Update( ); polyDataResult->UpdateInformation(); +#else + //... +#endif /* EED ofstream myfile; @@ -2048,6 +2033,23 @@ myfile.close(); std::vector vecCtrlPointZ; +printf("EED wxContourMainFrame::SegmentationOneSlice GetNumberOfLines=%d \n",polyDataResult->GetNumberOfLines() ); + +int numberOfPointsInCell; +int numberOfcells=polyDataResult->GetNumberOfCells(); +for (int jj=0; jjGetCell( jj ); + numberOfPointsInCell=vtkcell->GetNumberOfPoints(); + printf("EED wxContourMainFrame::SegmentationOneSlice cell=%d points=%d \n",jj,numberOfPointsInCell ); +}// for jj + +printf("EED wxContourMainFrame::SegmentationOneSlice PrintSelf \n"); + +polyDataResult->PrintSelf( std::cout, vtkIndent(0) ); + + + double *p; int ii,size=polyDataResult->GetNumberOfPoints(); int id; @@ -2055,6 +2057,7 @@ myfile.close(); { id = polyDataResult->GetLines()->GetData()->GetValue(ii); p = polyDataResult->GetPoint(id); +printf("EED wxContourMainFrame::SegmentationOneSlice (%d) id=%d px=%f py=%f\n",ii,id, p[0],p[1]); // double x=p[0]; // double y=p[1]; vecX.push_back( p[0] ); @@ -2080,27 +2083,30 @@ myfile.close(); extractcontrolpoints2d->GetSamplingControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); }*/ - if (method==0){ + if (method==0) + { extractcontrolpoints2d->GetInitialControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); - } - else if (method==1){ + } else if (method==1){ extractcontrolpoints2d->GetControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); - } - else if (method==2){ + } else if (method==2){ extractcontrolpoints2d->SetSamplingControlPoints( sampling ); extractcontrolpoints2d->GetSamplingControlPoints( &vecCtrlPointX , &vecCtrlPointY , &vecCtrlPointZ ); } //--Adding contour to the system - std::vector actualInstantVector; _instantPanel->getInstant( actualInstantVector ); actualInstantVector[1]=z; int j,sizeCtrPt = vecCtrlPointX.size(); manualBaseModel *manModelContour = kernelManager->factoryManualContourModel( typeofcontour ); - manModelContour->SetNumberOfPointsSpline( ((sizeCtrPt/100)+1)*100 ); - if (sizeCtrPt>=3){ +printf("EED wxContourMainFrame::SegmentationOneSlice sizeCtrPt=%d %d %d\n" , sizeCtrPt + , ((sizeCtrPt/100)+1)*100 *2 + , manModelContour->GetNumberOfPointsSpline() + ); + manModelContour->SetNumberOfPointsSpline( ((sizeCtrPt/100)+1)*100 *2 ); + if (sizeCtrPt>=3) + { for (j=0 ; jAddPoint( vecCtrlPointX[j] , vecCtrlPointY[j] , vecCtrlPointZ[j] ); @@ -2120,16 +2126,21 @@ myfile.close(); //_theViewPanel->getSceneManager()->configureViewControlTo( theName, manModelContour,spc, typeofcontour ) ; } // if addedModel } // if sizeCtrPt +printf("EED wxContourMainFrame::SegmentationOneSlice End\n"); } -int wxContourMainFrame::GetImageDataSizeZ(){ + +int wxContourMainFrame::GetImageDataSizeZ() +{ return _theViewPanel->GetImageDataSizeZ(); } -void wxContourMainFrame::GetImageDataRange(double *range){ +void wxContourMainFrame::GetImageDataRange(double *range) +{ _theViewPanel->GetImageDataRange(range); } -void wxContourMainFrame::onSegmentationAllSlice(int minZ,int maxZ,int isovalue,int sampling,int method){ +void wxContourMainFrame::onSegmentationAllSlice(int minZ,int maxZ,int isovalue,int sampling,int method) +{ //JCP 20-10-08 Undo redo implementation saveState(); //JCP 20-10-08 Undo redo implementation @@ -2366,29 +2377,33 @@ int wxContourMainFrame::getWindowLevel() return _theViewPanel->getWindowLevel(); } -void wxContourMainFrame::onBrigthnessColorWindowLevel(int colorwindow,int windowlevel){ +void wxContourMainFrame::onBrigthnessColorWindowLevel(int colorwindow,int windowlevel) +{ _theViewPanel->onBrigthnessColorWindowLevel(colorwindow, windowlevel); RefreshInterface(); } -void wxContourMainFrame::onInterpolation(bool interpolate){ +void wxContourMainFrame::onInterpolation(bool interpolate) +{ _theViewPanel->onInterpolation(interpolate); RefreshInterface(); } -void wxContourMainFrame::onChangeInstant(std::string name,int actual){ +void wxContourMainFrame::onChangeInstant(std::string name,int actual) +{ _instantPanel->setConceptValue( name, actual ); } -void wxContourMainFrame::resetAppend(){ +void wxContourMainFrame::resetAppend() +{ kernelManager->resetAppend(); - } -void wxContourMainFrame::onSpreadAdd(){ +void wxContourMainFrame::onSpreadAdd() +{ std::vector vecX; std::vector vecY; std::vector vecZ; @@ -2400,7 +2415,8 @@ void wxContourMainFrame::onSpreadAdd(){ } -void wxContourMainFrame::onSpreadAddAll(){ +void wxContourMainFrame::onSpreadAddAll() +{ //EED02 std::vector tempVector; _instantPanel->getInstant( tempVector ); @@ -2438,7 +2454,8 @@ void wxContourMainFrame::onSpreadAddAll(){ } -void wxContourMainFrame::onSpreadGo(int type){ +void wxContourMainFrame::onSpreadGo(int type) +{ //JCP 20-10-08 Undo redo implementation saveState(); //JCP 20-10-08 Undo redo implementation @@ -2493,11 +2510,14 @@ void wxContourMainFrame::onSpreadGo(int type){ //RefreshInterface(); } -void wxContourMainFrame::getInstantVector(std::vector& tempVector){ - +void wxContourMainFrame::getInstantVector(std::vector& tempVector) +{ + printf("wxContourMainFrame::getInstantVector Warning!! Methon not implemented ... \n"); + _instantPanel->getInstant( tempVector ); } -std::vector wxContourMainFrame::getOutlinesName(int slide){ +std::vector wxContourMainFrame::getOutlinesName(int slide) +{ std::vector tempVector; _instantPanel->getInstant(tempVector); //Asignation of slide number should be different ex by name @@ -3091,10 +3111,22 @@ void wxContourMainFrame::SaveImageResult(std::string directory,std::string namef // Image Value vtkImageChangeInformation *valueChInfo = vtkImageChangeInformation::New(); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 valueChInfo->SetInput(value); +#else + valueChInfo->SetInputData(value); +#endif valueChInfo->SetSpacingScale(spc); + valueChInfo->Update(); vtkMetaImageWriter *writerValueImage = vtkMetaImageWriter::New( ); + +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 writerValueImage->SetInput( valueChInfo->GetOutput() ); +#else + writerValueImage->SetInputData( valueChInfo->GetOutput() ); +#endif writerValueImage->SetFileName( (const char *)filename.mb_str() ); writerValueImage->SetFileDimensionality( 3 ); writerValueImage->SetCompression(false); @@ -3110,10 +3142,23 @@ void wxContourMainFrame::SaveImageResult(std::string directory,std::string namef vtkImageChangeInformation *maskChInfo = vtkImageChangeInformation::New(); +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 maskChInfo->SetInput(mask); +#else + maskChInfo->SetInputData(mask); +#endif maskChInfo->SetSpacingScale(spc); + maskChInfo->Update(); vtkMetaImageWriter *writerMaskImage = vtkMetaImageWriter::New( ); + +//EED 2017-01-01 Migration VTK7 +#if VTK_MAJOR_VERSION <= 5 writerMaskImage->SetInput( maskChInfo->GetOutput() ); +#else + writerMaskImage->SetInputData( maskChInfo->GetOutput() ); +#endif + writerMaskImage->SetFileName( (const char *)filename.mb_str() ); writerMaskImage->SetFileDimensionality( 3 ); writerMaskImage->SetCompression(false); @@ -3386,7 +3431,6 @@ void wxContourMainFrame::SetFileLocation(std::string newFileLocation) void wxContourMainFrame::FlipSelectedContours(int flipDirection) { - printf("EED wxContourMainFrame::FlipSelectedContours flipDirection=%d \n", flipDirection ); FlipLstOfContours( (std::vector)_theViewPanel->getSceneManager()->getSelectedObjects() , flipDirection @@ -3396,7 +3440,6 @@ void wxContourMainFrame::FlipSelectedContours(int flipDirection) void wxContourMainFrame::FlipActualSliceContours(int flipDirection) { - printf("EED wxContourMainFrame::FlipActualSliceContours flipDirection=%d \n", flipDirection ); FlipLstOfContours( (std::vector)_theViewPanel->getSceneManager()->GetlstContoursNameActualSlice() , flipDirection @@ -3405,7 +3448,6 @@ void wxContourMainFrame::FlipActualSliceContours(int flipDirection) void wxContourMainFrame::FlipAllContours(int flipDirection) { - printf("EED wxContourMainFrame::FlipAllContours flipDirection=%d \n", flipDirection ); FlipLstOfContours( kernelManager->GetLstNameThings() , flipDirection @@ -3476,6 +3518,11 @@ void wxContourMainFrame::FlipContours(int typeContourFlip, int flipDirection) } +void wxContourMainFrame::SetXY(int x, int y) +{ + _theViewPanel->SetXY(x,y); +} +