X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=lib%2Ffpa%2FDataStructures%2FImage%2FPath.hxx;fp=lib%2Ffpa%2FDataStructures%2FImage%2FPath.hxx;h=7fc32cfc0bf9086cc2f153a14fee5d2500e8b519;hb=bd89a1af0c14ed2ac0afeca923103de54283cbaf;hp=0000000000000000000000000000000000000000;hpb=a8ac405fe1422bc0792a810f7f0693096a22c20e;p=FrontAlgorithms.git

diff --git a/lib/fpa/DataStructures/Image/Path.hxx b/lib/fpa/DataStructures/Image/Path.hxx
new file mode 100644
index 0000000..7fc32cf
--- /dev/null
+++ b/lib/fpa/DataStructures/Image/Path.hxx
@@ -0,0 +1,215 @@
+// =========================================================================
+// @author Leonardo Florez Valencia
+// @email florez-l@javeriana.edu.co
+// =========================================================================
+
+#ifndef __fpa__DataStructures__Image__Path__hxx__
+#define __fpa__DataStructures__Image__Path__hxx__
+
+#include <itkMath.h>
+#include <itkNumericTraits.h>
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+unsigned long fpa::DataStructures::Image::Path< _VDim >::
+GetSize( ) const
+{
+  return( this->GetVertexList( )->Size( ) );
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+typename fpa::DataStructures::Image::Path< _VDim >::
+TContinuousIndex fpa::DataStructures::Image::Path< _VDim >::
+GetContinuousVertex( unsigned long i ) const
+{
+  return( this->GetVertexList( )->GetElement( i ) );
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+typename fpa::DataStructures::Image::Path< _VDim >::
+TIndex fpa::DataStructures::Image::Path< _VDim >::
+GetVertex( unsigned long i ) const
+{
+  TContinuousIndex cidx = this->GetContinuousVertex( i );
+  TIndex idx;
+  for( unsigned int d = 0; d < _VDim; ++d )
+    idx[ d ] = cidx[ d ];
+  return( idx );
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+typename fpa::DataStructures::Image::Path< _VDim >::
+TPoint fpa::DataStructures::Image::Path< _VDim >::
+GetPoint( unsigned long i ) const
+{
+  typedef typename TPoint::CoordRepType _TCoordRep;
+  TPoint pnt;
+  TContinuousIndex idx = this->GetVertex( i );
+  for( unsigned int r = 0; r < _VDim; ++r )
+  {
+    _TCoordRep sum = itk::NumericTraits< _TCoordRep >::ZeroValue( );
+    for( unsigned int c = 0; c < _VDim; ++c )
+      sum += this->m_IndexToPhysicalPoint( r, c ) * idx[ c ];
+    pnt[ r ] = sum + this->m_Origin[ r ];
+
+  } // rof
+  return( pnt );
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+void fpa::DataStructures::Image::Path< _VDim >::
+SetSpacing( const TSpacing& spac )
+{
+  if( this->m_Spacing != spac )
+  {
+    this->m_Spacing = spac;
+    this->_ComputeIndexToPhysicalPointMatrices( );
+    this->Modified( );
+
+  } // fi
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+void fpa::DataStructures::Image::Path< _VDim >::
+SetSpacing( const double spac[ _VDim ] )
+{
+  this->SetSpacing( TSpacing( spac ) );
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+void fpa::DataStructures::Image::Path< _VDim >::
+SetSpacing( const float spac[ _VDim ] )
+{
+  TSpacing s;
+  for( unsigned int d = 0; d < _VDim; ++d )
+    s[ d ] = spac[ d ];
+  this->SetSpacing( s );
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+void fpa::DataStructures::Image::Path< _VDim >::
+SetOrigin( const double ori[ _VDim ] )
+{
+  this->SetOrigin( TPoint( ori ) );
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+void fpa::DataStructures::Image::Path< _VDim >::
+SetOrigin( const float ori[ _VDim ] )
+{
+  this->SetOrigin( TPoint( ori ) );
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+void fpa::DataStructures::Image::Path< _VDim >::
+SetDirection( const TDirection& dir )
+{
+  bool modified = false;
+  for( unsigned int r = 0; r < _VDim; r++ )
+  {
+    for( unsigned int c = 0; c < _VDim; c++ )
+    {
+      if(
+        itk::Math::NotExactlyEquals(
+          this->m_Direction[ r ][ c ], dir[ r ][ c ]
+          )
+        )
+      {
+        this->m_Direction[ r ][ c ] = dir[ r ][ c ];
+        modified = true;
+      } // fi
+
+    } // rof
+
+  } // rof
+  if( modified )
+  {
+    this->_ComputeIndexToPhysicalPointMatrices( );
+    this->m_InverseDirection = this->m_Direction.GetInverse( );
+    this->Modified( );
+
+  } // fi
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+void fpa::DataStructures::Image::Path< _VDim >::
+Graft( itk::DataObject* o )
+{
+  this->Superclass::Graft( o );
+  Self* other = dynamic_cast< Self* >( o );
+  if( other != NULL )
+  {
+    this->m_DefaultInputStepSize = other->m_DefaultInputStepSize;
+    this->Initialize( );
+    for( unsigned long i = 0; i < other->GetSize( ); ++i )
+      this->AddVertex( other->GetContinuousVertex( i ) );
+    this->m_Spacing = other->m_Spacing;
+    this->m_Origin = other->m_Origin;
+    this->m_Direction = other->m_Direction;
+    this->m_InverseDirection = other->m_InverseDirection;
+    this->m_IndexToPhysicalPoint = other->m_IndexToPhysicalPoint;
+    this->m_PhysicalPointToIndex = other->m_PhysicalPointToIndex;
+
+  } // fi
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+fpa::DataStructures::Image::Path< _VDim >::
+Path( )
+  : Superclass( )
+{
+  this->m_Spacing.Fill( 1.0 );
+  this->m_Origin.Fill( 0.0 );
+  this->m_Direction.SetIdentity( );
+  this->m_InverseDirection.SetIdentity( );
+  this->m_IndexToPhysicalPoint.SetIdentity( );
+  this->m_PhysicalPointToIndex.SetIdentity( );
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+fpa::DataStructures::Image::Path< _VDim >::
+~Path( )
+{
+}
+
+// -------------------------------------------------------------------------
+template< unsigned int _VDim >
+void fpa::DataStructures::Image::Path< _VDim >::
+_ComputeIndexToPhysicalPointMatrices( )
+{
+  TDirection scale;
+  scale.Fill( 0.0 );
+  for( unsigned int i = 0; i < _VDim; i++ )
+  {
+    if( this->m_Spacing[ i ] == 0.0 )
+      itkExceptionMacro(
+        "A spacing of 0 is not allowed: Spacing is " << this->m_Spacing
+        );
+    scale[ i ][ i ] = this->m_Spacing[ i ];
+
+  } // rof
+
+  if( vnl_determinant( this->m_Direction.GetVnlMatrix( ) ) == 0.0 )
+    itkExceptionMacro(
+      << "Bad direction, determinant is 0. Direction is "
+      << this->m_Direction
+      );
+  this->m_IndexToPhysicalPoint = this->m_Direction * scale;
+  this->m_PhysicalPointToIndex = this->m_IndexToPhysicalPoint.GetInverse( );
+  this->Modified( );
+}
+
+#endif // __fpa__DataStructures__Image__Path__hxx__
+// eof - $RCSfile$