X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=plugins%2FITKIO%2FImageReader.cxx;fp=plugins%2FITKIO%2FImageReader.cxx;h=0000000000000000000000000000000000000000;hb=2e142df11d6f312a2a2b5097b8da73571ed523e8;hp=90b032fc2fedfc01439bac24aff94887cbabbcf9;hpb=61b3659afe961ed248f30e26f9ca8f28fcfafddc;p=cpPlugins.git

diff --git a/plugins/ITKIO/ImageReader.cxx b/plugins/ITKIO/ImageReader.cxx
deleted file mode 100644
index 90b032f..0000000
--- a/plugins/ITKIO/ImageReader.cxx
+++ /dev/null
@@ -1,269 +0,0 @@
-#include <ITKIO/ImageReader.h>
-#include <cpInstances/DataObjects/Image.h>
-#include <cpPlugins/QT/OpenFileDialog.h>
-
-#define ITKIOImageBase_HIDDEN
-#include <itkImageFileReader.h>
-#include <itkImageSeriesReader.h>
-#include <itkImageIOFactory.h>
-
-#ifdef cpPlugins_QT4
-#  include <QApplication>
-#endif // cpPlugins_QT4
-
-// -------------------------------------------------------------------------
-QDialog* cpPluginsITKIO::ImageReader::
-CreateQDialog( )
-{
-#ifdef cpPlugins_QT4
-  cpPlugins::QT::OpenFileDialog* dlg = NULL;
-  if( QApplication::instance( ) != NULL )
-  {
-    dlg = new cpPlugins::QT::OpenFileDialog( );
-    dlg->SetParameters( &( this->m_Parameters ), "FileNames" );
-
-  } // fi
-  return( dlg );
-#else // cpPlugins_QT4
-  return( NULL );
-#endif // cpPlugins_QT4
-}
-
-// -------------------------------------------------------------------------
-cpPluginsITKIO::ImageReader::
-ImageReader( )
-  : Superclass( )
-{
-  this->_ConfigureOutput< cpInstances::DataObjects::Image >( "Output" );
-  this->m_Parameters.Clear( );
-  this->m_Parameters.ConfigureAsOpenFileNameList( "FileNames" );
-  this->m_Parameters.SetAcceptedFileExtensions(
-    "FileNames",
-    "Image files (*.bmp *.png *.jpg *.jpeg *.dcm *.mhd *.nhdr *.nrrd *.tiff)"
-    );
-}
-
-// -------------------------------------------------------------------------
-cpPluginsITKIO::ImageReader::
-~ImageReader( )
-{
-}
-
-// -------------------------------------------------------------------------
-void cpPluginsITKIO::ImageReader::
-_GenerateData( )
-{
-  // Get filenames
-  auto fnames = this->m_Parameters.GetOpenFileNameList( "FileNames" );
-  std::string fname = "";
-  if( fnames.size( ) > 1 )
-  {
-    std::stringstream fname_str;
-    fname_str << fnames[ 0 ] << cpPlugins_PATH_SEPARATOR << fnames[ 1 ];
-    fname = fname_str.str( );
-  }
-  else if( fnames.size( ) == 1 )
-    fname = fnames[ 0 ];
-
-  if( fname != "" )
-  {
-    // Guess image properties
-    itk::ImageIOBase::Pointer io =
-      itk::ImageIOFactory::CreateImageIO(
-        fname.c_str( ), itk::ImageIOFactory::ReadMode
-        );
-    if( io.IsNotNull( ) )
-    {
-      io->SetFileName( fname );
-      io->ReadImageInformation( );
-      bool success = false;
-      unsigned int dim = io->GetNumberOfDimensions( );
-#ifdef cpPlugins_PROCESS_DIMS_1
-      if( dim == 1 ) success = this->_GD0< 1 >( io );
-#endif // cpPlugins_PROCESS_DIMS_1
-#ifdef cpPlugins_PROCESS_DIMS_2
-      if( dim == 2 ) success = this->_GD0< 2 >( io );
-#endif // cpPlugins_PROCESS_DIMS_2
-#ifdef cpPlugins_PROCESS_DIMS_3
-      if( dim == 3 ) success = this->_GD0< 3 >( io );
-#endif // cpPlugins_PROCESS_DIMS_3
-#ifdef cpPlugins_PROCESS_DIMS_4
-      if( dim == 4 ) success = this->_GD0< 4 >( io );
-#endif // cpPlugins_PROCESS_DIMS_4
-      if( !success )
-        this->_Error( "Image dimension not supported." );
-    }
-    else
-      this->_Error(
-        std::string( "Could not create an ImageIO for \"" ) +
-        fnames[ 0 ] +
-        std::string( "\"" )
-        );
-  }
-  else
-    this->_Error( "No image(s) given" );
-}
-
-// -------------------------------------------------------------------------
-template< unsigned int _Dim >
-bool cpPluginsITKIO::ImageReader::
-_GD0( itk::ImageIOBase* io )
-{
-  typedef unsigned char  uchar;
-  typedef unsigned short ushort;
-  typedef unsigned int   uint;
-  typedef unsigned long  ulong;
-
-  itk::ImageIOBase::IOComponentType ct = io->GetComponentType( );
-  itk::ImageIOBase::IOPixelType pt = io->GetPixelType( );
-
-  bool success = false;
-  if( pt == itk::ImageIOBase::SCALAR )
-  {
-    if( ct == itk::ImageIOBase::CHAR ) success = this->_GD1< char, _Dim >( io );
-    if( ct == itk::ImageIOBase::UCHAR ) success = this->_GD1< uchar, _Dim >( io );
-    if( ct == itk::ImageIOBase::SHORT ) success = this->_GD1< short, _Dim >( io );
-    if( ct == itk::ImageIOBase::USHORT ) success = this->_GD1< ushort, _Dim >( io );
-    if( ct == itk::ImageIOBase::INT ) success = this->_GD1< int, _Dim >( io );
-    if( ct == itk::ImageIOBase::UINT ) success = this->_GD1< uint, _Dim >( io );
-    if( ct == itk::ImageIOBase::LONG ) success = this->_GD1< long, _Dim >( io );
-    if( ct == itk::ImageIOBase::ULONG ) success = this->_GD1< ulong, _Dim >( io );
-    if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< float, _Dim >( io );
-    if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< double, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::RGB )
-  {
-    if( ct == itk::ImageIOBase::CHAR ) success = this->_GD1< itk::RGBPixel< char >, _Dim >( io );
-    if( ct == itk::ImageIOBase::UCHAR ) success = this->_GD1< itk::RGBPixel< uchar >, _Dim >( io );
-    if( ct == itk::ImageIOBase::SHORT ) success = this->_GD1< itk::RGBPixel< short >, _Dim >( io );
-    if( ct == itk::ImageIOBase::USHORT ) success = this->_GD1< itk::RGBPixel< ushort >, _Dim >( io );
-    if( ct == itk::ImageIOBase::INT ) success = this->_GD1< itk::RGBPixel< int >, _Dim >( io );
-    if( ct == itk::ImageIOBase::UINT ) success = this->_GD1< itk::RGBPixel< uint >, _Dim >( io );
-    if( ct == itk::ImageIOBase::LONG ) success = this->_GD1< itk::RGBPixel< long >, _Dim >( io );
-    if( ct == itk::ImageIOBase::ULONG ) success = this->_GD1< itk::RGBPixel< ulong >, _Dim >( io );
-    if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< itk::RGBPixel< float >, _Dim >( io );
-    if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< itk::RGBPixel< double >, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::RGBA )
-  {
-    if( ct == itk::ImageIOBase::CHAR ) success = this->_GD1< itk::RGBAPixel< char >, _Dim >( io );
-    if( ct == itk::ImageIOBase::UCHAR ) success = this->_GD1< itk::RGBAPixel< uchar >, _Dim >( io );
-    if( ct == itk::ImageIOBase::SHORT ) success = this->_GD1< itk::RGBAPixel< short >, _Dim >( io );
-    if( ct == itk::ImageIOBase::USHORT ) success = this->_GD1< itk::RGBAPixel< ushort >, _Dim >( io );
-    if( ct == itk::ImageIOBase::INT ) success = this->_GD1< itk::RGBAPixel< int >, _Dim >( io );
-    if( ct == itk::ImageIOBase::UINT ) success = this->_GD1< itk::RGBAPixel< uint >, _Dim >( io );
-    if( ct == itk::ImageIOBase::LONG ) success = this->_GD1< itk::RGBAPixel< long >, _Dim >( io );
-    if( ct == itk::ImageIOBase::ULONG ) success = this->_GD1< itk::RGBAPixel< ulong >, _Dim >( io );
-    if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< itk::RGBAPixel< float >, _Dim >( io );
-    if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< itk::RGBAPixel< double >, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::COMPLEX )
-  {
-    if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< std::complex< float >, _Dim >( io );
-    if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< std::complex< double >, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::COVARIANTVECTOR )
-  {
-    if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< itk::CovariantVector< float, _Dim >, _Dim >( io );
-    if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< itk::CovariantVector< double, _Dim >, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::POINT )
-  {
-    if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< itk::Point< float, _Dim >, _Dim >( io );
-    if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< itk::Point< double, _Dim >, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::VECTOR )
-  {
-    if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< itk::Vector< float, _Dim >, _Dim >( io );
-    if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< itk::Vector< double, _Dim >, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::SYMMETRICSECONDRANKTENSOR )
-  {
-    if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< itk::SymmetricSecondRankTensor< float, _Dim >, _Dim >( io );
-    if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< itk::SymmetricSecondRankTensor< double, _Dim >, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::DIFFUSIONTENSOR3D )
-  {
-    if( _Dim == 3 )
-    {
-      if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< itk::DiffusionTensor3D< float >, _Dim >( io );
-      if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< itk::DiffusionTensor3D< double >, _Dim >( io );
-    }
-    else
-      this->_Error( "DiffusionTensor3D dimension not supported." );
-  }
-  else if( pt == itk::ImageIOBase::MATRIX )
-  {
-    if( ct == itk::ImageIOBase::FLOAT ) success = this->_GD1< itk::Matrix< float, _Dim, _Dim >, _Dim >( io );
-    if( ct == itk::ImageIOBase::DOUBLE ) success = this->_GD1< itk::Matrix< double, _Dim, _Dim >, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::OFFSET )
-  {
-    this->_GD1< itk::Offset< _Dim >, _Dim >( io );
-  }
-  else if( pt == itk::ImageIOBase::FIXEDARRAY )
-  {
-  } // fi
-  return( success );
-}
-
-// -------------------------------------------------------------------------
-template< class _TPixel, unsigned int _Dim >
-bool cpPluginsITKIO::ImageReader::
-_GD1( itk::ImageIOBase* io )
-{
-  typedef itk::Image< _TPixel, _Dim > _TImage;
-
-  // Get filenames
-  auto fnames = this->m_Parameters.GetOpenFileNameList( "FileNames" );
-  if( fnames.size( ) == 1 || fnames.size( ) == 2 )
-  {
-    std::stringstream fname_str;
-    if( fnames.size( ) == 1 )
-      fname_str << fnames[ 0 ];
-    else
-      fname_str << fnames[ 0 ] << cpPlugins_PATH_SEPARATOR << fnames[ 1 ];
-
-    auto f = this->_CreateITK< itk::ImageFileReader< _TImage > >( );
-    f->SetFileName( fname_str.str( ) );
-    f->SetImageIO( io );
-    try
-    {
-      f->Update( );
-      this->GetOutput( "Output" )->SetITK( f->GetOutput( ) );
-      return( true );
-    }
-    catch( itk::ExceptionObject& err )
-    {
-      this->_Error( err.GetDescription( ) );
-      return( false );
-
-    } // yrt
-  }
-  else // if( fnames.size( ) > 1 )
-  {
-    auto f = this->_CreateITK< itk::ImageSeriesReader< _TImage > >( );
-    auto i = fnames.begin( );
-    std::stringstream dir;
-    dir << *i << cpPlugins_PATH_SEPARATOR;
-    i++;
-    for( ; i != fnames.end( ); ++i )
-      f->AddFileName( dir.str( ) + *i );
-    f->SetImageIO( io );
-    try
-    {
-      f->Update( );
-      this->GetOutput( "Output" )->SetITK( f->GetOutput( ) );
-      return( true );
-    }
-    catch( itk::ExceptionObject& err )
-    {
-      this->_Error( err.GetDescription( ) );
-      return( false );
-
-    } // yrt
-
-  } // fi
-}
-
-// eof - $RCSfile$