X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=segmentation%2FCMakeLists.txt;h=df2369164fd75344e6af1dce21bdd031f9064e02;hb=6e16222234a90c6079a8f4696c92de7349a496bb;hp=2f725df59c0a98dcf5fd403ed39a7966d526b6be;hpb=e61455caad373a138edde0716ce5a556f4d1a624;p=clitk.git diff --git a/segmentation/CMakeLists.txt b/segmentation/CMakeLists.txt index 2f725df..df23691 100644 --- a/segmentation/CMakeLists.txt +++ b/segmentation/CMakeLists.txt @@ -4,95 +4,79 @@ INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake) #========================================================= -SET( CMAKE_VERBOSE_MAKEFILE off) +#Add your ggo files to this list if they are used by vv +FOREACH(clitkTool clitkExtractLung clitkExtractPatient) + WRAP_GGO(${clitkTool}_GGO_C ${clitkTool}.ggo) + SET(GGO_C_FILES ${GGO_C_FILES} ${${clitkTool}_GGO_C}) +ENDFOREACH(clitkTool) +ADD_LIBRARY(clitkSegmentationGgoLib ${GGO_C_FILES}) #========================================================= -# WRAP_GGO(clitkSegmentationFilters_GGO_C -# clitkFillMask.ggo -# clitkConnectedComponentLabeling.ggo -# clitkExtractLung.ggo -# clitkExtractPatient.ggo -# clitkExtractBones.ggo -# clitkExtractMediastinum.ggo -# clitkExtractLymphStations.ggo -# ) +IF(CLITK_BUILD_SEGMENTATION) + WRAP_GGO(clitkConnectedComponentLabeling_GGO_C clitkConnectedComponentLabeling.ggo) + ADD_EXECUTABLE(clitkConnectedComponentLabeling clitkConnectedComponentLabeling.cxx ${clitkConnectedComponentLabeling_GGO_C}) + TARGET_LINK_LIBRARIES(clitkConnectedComponentLabeling clitkCommon ITKIO) -# SET(clitkSegmentationFilters_SRC -# ${clitkSegmentationFilters_GGO_C} -# ) + WRAP_GGO(clitkFillMask_GGO_C clitkFillMask.ggo) + ADD_EXECUTABLE(clitkFillMask clitkFillMask.cxx clitkFillMaskGenericFilter.cxx ${clitkFillMask_GGO_C}) + TARGET_LINK_LIBRARIES(clitkFillMask clitkCommon ITKIO) -# ADD_LIBRARY(clitkSegmentationFilters STATIC ${clitkSegmentationFilters_SRC}) + ADD_EXECUTABLE(clitkExtractPatient clitkExtractPatient.cxx ${clitkExtractPatient_GGO_C}) + TARGET_LINK_LIBRARIES(clitkExtractPatient clitkCommon ITKIO) -# ADD_EXECUTABLE(clitkTestFilter clitkTestFilter.cxx clitkTestFilter_ggo.c) -# TARGET_LINK_LIBRARIES(clitkTestFilter clitkCommon ITKIO clitkSegmentationFilters ITKStatistics) + ADD_EXECUTABLE(clitkExtractLung clitkExtractLung.cxx ${clitkExtractLung_GGO_C}) + TARGET_LINK_LIBRARIES(clitkExtractLung clitkCommon ITKIO) -######################################### Segmentation part -WRAP_GGO(clitkConnectedComponentLabeling_GGO_C clitkConnectedComponentLabeling.ggo) -ADD_EXECUTABLE(clitkConnectedComponentLabeling clitkConnectedComponentLabeling.cxx ${clitkConnectedComponentLabeling_GGO_C}) -TARGET_LINK_LIBRARIES(clitkConnectedComponentLabeling clitkCommon ITKIO) + WRAP_GGO(clitkExtractAirwayTreeInfo_GGO_C clitkExtractAirwayTreeInfo.ggo) + ADD_EXECUTABLE(clitkExtractAirwayTreeInfo clitkExtractAirwayTreeInfo.cxx ${clitkExtractAirwayTreeInfo_GGO_C}) + TARGET_LINK_LIBRARIES(clitkExtractAirwayTreeInfo clitkCommon ITKIO) -WRAP_GGO(clitkFillMask_GGO_C clitkFillMask.ggo) -ADD_EXECUTABLE(clitkFillMask clitkFillMask.cxx clitkFillMaskGenericFilter.cxx ${clitkFillMask_GGO_C}) -TARGET_LINK_LIBRARIES(clitkFillMask clitkCommon ITKIO) + WRAP_GGO(clitkExtractBones_GGO_C clitkExtractBones.ggo) + ADD_EXECUTABLE(clitkExtractBones clitkExtractBones.cxx ${clitkExtractBones_GGO_C}) + TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon ITKIO) -WRAP_GGO(clitkExtractPatient_GGO_C clitkExtractPatient.ggo) -ADD_EXECUTABLE(clitkExtractPatient clitkExtractPatient.cxx ${clitkExtractPatient_GGO_C}) -TARGET_LINK_LIBRARIES(clitkExtractPatient clitkCommon ITKIO) + WRAP_GGO(clitkExtractMediastinum_GGO_C clitkExtractMediastinum.ggo) + ADD_EXECUTABLE(clitkExtractMediastinum clitkExtractMediastinum.cxx ${clitkExtractMediastinum_GGO_C}) + TARGET_LINK_LIBRARIES(clitkExtractMediastinum clitkCommon ITKIO ) -WRAP_GGO(clitkExtractLung_GGO_C clitkExtractLung.ggo) -ADD_EXECUTABLE(clitkExtractLung clitkExtractLung.cxx ${clitkExtractLung_GGO_C}) -TARGET_LINK_LIBRARIES(clitkExtractLung clitkCommon ITKIO) + WRAP_GGO(clitkExtractLymphStations_GGO_C clitkExtractLymphStations.ggo) + ADD_EXECUTABLE(clitkExtractLymphStations clitkExtractLymphStations.cxx ${clitkExtractLymphStations_GGO_C}) + TARGET_LINK_LIBRARIES(clitkExtractLymphStations clitkCommon ITKIO ) -WRAP_GGO(clitkExtractBones_GGO_C clitkExtractBones.ggo) -ADD_EXECUTABLE(clitkExtractBones clitkExtractBones.cxx ${clitkExtractBones_GGO_C}) -TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon ITKIO) + WRAP_GGO(clitkMorphoMath_GGO_C clitkMorphoMath.ggo) + ADD_EXECUTABLE(clitkMorphoMath clitkMorphoMath.cxx clitkMorphoMathGenericFilter.cxx ${clitkMorphoMath_GGO_C}) + TARGET_LINK_LIBRARIES(clitkMorphoMath ITKIO clitkCommon) -WRAP_GGO(clitkExtractMediastinum_GGO_C clitkExtractMediastinum.ggo) -ADD_EXECUTABLE(clitkExtractMediastinum clitkExtractMediastinum.cxx ${clitkExtractMediastinum_GGO_C}) -TARGET_LINK_LIBRARIES(clitkExtractMediastinum clitkCommon ITKIO ) + WRAP_GGO(clitkMorphoReconstruction_GGO_C clitkMorphoReconstruction.ggo) + ADD_EXECUTABLE(clitkMorphoReconstruction clitkMorphoReconstruction.cxx clitkMorphoReconstructionGenericFilter.cxx ${clitkMorphoReconstruction_GGO_C}) + TARGET_LINK_LIBRARIES(clitkMorphoReconstruction clitkCommon ITKIO ) -WRAP_GGO(clitkExtractLymphStations_GGO_C clitkExtractLymphStations.ggo) -ADD_EXECUTABLE(clitkExtractLymphStations clitkExtractLymphStations.cxx ${clitkExtractLymphStations_GGO_C}) -TARGET_LINK_LIBRARIES(clitkExtractLymphStations clitkCommon ITKIO ) + WRAP_GGO(clitkCalculateDistanceMap_GGO_C clitkCalculateDistanceMap.ggo) + ADD_EXECUTABLE(clitkCalculateDistanceMap clitkCalculateDistanceMap.cxx clitkCalculateDistanceMapGenericFilter.cxx ${clitkCalculateDistanceMap_GGO_C}) + TARGET_LINK_LIBRARIES(clitkCalculateDistanceMap clitkCommon ITKIO) -WRAP_GGO(clitkMorphoMath_GGO_C clitkMorphoMath.ggo) -ADD_EXECUTABLE(clitkMorphoMath clitkMorphoMath.cxx clitkMorphoMathGenericFilter.cxx ${clitkMorphoMath_GGO_C}) -TARGET_LINK_LIBRARIES(clitkMorphoMath ITKIO clitkCommon) + WRAP_GGO(clitkLevelSetSegmentation_GGO_C clitkLevelSetSegmentation.ggo) + ADD_EXECUTABLE(clitkLevelSetSegmentation clitkLevelSetSegmentation.cxx clitkLevelSetSegmentationGenericFilter.cxx ${clitkLevelSetSegmentation_GGO_C}) + TARGET_LINK_LIBRARIES(clitkLevelSetSegmentation clitkCommon ITKIO) -WRAP_GGO(clitkMorphoReconstruction_GGO_C clitkMorphoReconstruction.ggo) -ADD_EXECUTABLE(clitkMorphoReconstruction clitkMorphoReconstruction.cxx clitkMorphoReconstructionGenericFilter.cxx ${clitkMorphoReconstruction_GGO_C}) -TARGET_LINK_LIBRARIES(clitkMorphoReconstruction clitkCommon ITKIO ) + WRAP_GGO(clitkAnd_GGO_C clitkAnd.ggo) + ADD_EXECUTABLE(clitkAnd clitkAnd.cxx clitkAndGenericFilter.cxx ${clitkAnd_GGO_C}) + TARGET_LINK_LIBRARIES(clitkAnd clitkCommon ITKIO ) -WRAP_GGO(clitkCalculateDistanceMap_GGO_C clitkCalculateDistanceMap.ggo) -ADD_EXECUTABLE(clitkCalculateDistanceMap clitkCalculateDistanceMap.cxx clitkCalculateDistanceMapGenericFilter.cxx ${clitkCalculateDistanceMap_GGO_C}) -TARGET_LINK_LIBRARIES(clitkCalculateDistanceMap clitkCommon ITKIO) + WRAP_GGO(clitkRegionGrowing_GGO_C clitkRegionGrowing.ggo) + ADD_EXECUTABLE(clitkRegionGrowing clitkRegionGrowing.cxx clitkRegionGrowingGenericFilter.cxx ${clitkRegionGrowing_GGO_C}) + TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon ITKIO) -WRAP_GGO(clitkLevelSetSegmentation_GGO_C clitkLevelSetSegmentation.ggo) -ADD_EXECUTABLE(clitkLevelSetSegmentation clitkLevelSetSegmentation.cxx clitkLevelSetSegmentationGenericFilter.cxx ${clitkLevelSetSegmentation_GGO_C}) -TARGET_LINK_LIBRARIES(clitkLevelSetSegmentation clitkCommon ITKIO) + WRAP_GGO(clitkDecomposeAndReconstruct_GGO_C clitkDecomposeAndReconstruct.ggo) + ADD_EXECUTABLE(clitkDecomposeAndReconstruct clitkDecomposeAndReconstruct.cxx clitkDecomposeAndReconstructGenericFilter.cxx ${clitkDecomposeAndReconstruct_GGO_C}) + TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon ITKIO) -WRAP_GGO(clitkBinarizeImage_GGO_C clitkBinarizeImage.ggo) -ADD_EXECUTABLE(clitkBinarizeImage clitkBinarizeImage.cxx clitkBinarizeImageGenericFilter.cxx ${clitkBinarizeImage_GGO_C}) -TARGET_LINK_LIBRARIES(clitkBinarizeImage clitkCommon ITKIO) - -WRAP_GGO(clitkAnd_GGO_C clitkAnd.ggo) -ADD_EXECUTABLE(clitkAnd clitkAnd.cxx clitkAndGenericFilter.cxx ${clitkAnd_GGO_C}) -TARGET_LINK_LIBRARIES(clitkAnd clitkCommon ITKIO ) - -WRAP_GGO(clitkRegionGrowing_GGO_C clitkRegionGrowing.ggo) -ADD_EXECUTABLE(clitkRegionGrowing clitkRegionGrowing.cxx clitkRegionGrowingGenericFilter.cxx ${clitkRegionGrowing_GGO_C}) -TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon ITKIO) - -WRAP_GGO(clitkDecomposeAndReconstruct_GGO_C clitkDecomposeAndReconstruct.ggo) -ADD_EXECUTABLE(clitkDecomposeAndReconstruct clitkDecomposeAndReconstruct.cxx clitkDecomposeAndReconstructGenericFilter.cxx ${clitkDecomposeAndReconstruct_GGO_C}) -TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon ITKIO) - -WRAP_GGO(clitkMotionMask_GGO_C clitkMotionMask.ggo) -ADD_EXECUTABLE(clitkMotionMask clitkMotionMask.cxx clitkMotionMaskGenericFilter.cxx ${clitkMotionMask_GGO_C}) -TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon ITKIO ITKStatistics ) - -WRAP_GGO(clitkFillImageRegion_GGO_C clitkFillImageRegion.ggo) -ADD_EXECUTABLE(clitkFillImageRegion clitkFillImageRegion.cxx clitkFillImageRegionGenericFilter.cxx ${clitkFillImageRegion_GGO_C}) -TARGET_LINK_LIBRARIES(clitkFillImageRegion clitkCommon ITKIO) + WRAP_GGO(clitkMotionMask_GGO_C clitkMotionMask.ggo) + ADD_EXECUTABLE(clitkMotionMask clitkMotionMask.cxx clitkMotionMaskGenericFilter.cxx ${clitkMotionMask_GGO_C}) + TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon ITKIO ITKStatistics ) + WRAP_GGO(clitkFillImageRegion_GGO_C clitkFillImageRegion.ggo) + ADD_EXECUTABLE(clitkFillImageRegion clitkFillImageRegion.cxx clitkFillImageRegionGenericFilter.cxx ${clitkFillImageRegion_GGO_C}) + TARGET_LINK_LIBRARIES(clitkFillImageRegion clitkCommon ITKIO) +ENDIF(CLITK_BUILD_SEGMENTATION)