X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=segmentation%2FCMakeLists.txt;h=f26ec74c203d0ee38e5df3dba5192b250d459a44;hb=b3eefccefcc9a81814c52e249fe805df7dc2cbf7;hp=353dcf3dfab5dd1e0104a83740a583739bad6024;hpb=9a4dda175415c133b547eec505cd0497d3181f8d;p=clitk.git

diff --git a/segmentation/CMakeLists.txt b/segmentation/CMakeLists.txt
index 353dcf3..f26ec74 100644
--- a/segmentation/CMakeLists.txt
+++ b/segmentation/CMakeLists.txt
@@ -1,7 +1,7 @@
 #=========================================================
 
 # Add Libraries used in vv and clitk to avoid recompilation
-FOREACH(clitkTool clitkExtractLung clitkExtractPatient)
+FOREACH(clitkTool clitkExtractLung clitkExtractPatient clitkConnectedComponentLabeling clitkRegionGrowing)
     WRAP_GGO(${clitkTool}_GGO_C ${clitkTool}.ggo)
     SET(GGO_C_FILES ${GGO_C_FILES} ${${clitkTool}_GGO_C})
 ENDFOREACH(clitkTool)
@@ -26,53 +26,16 @@ IF(CLITK_BUILD_SEGMENTATION)
     TARGET_LINK_LIBRARIES(clitkExtractLung clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractLung)
 
-    # WRAP_GGO(clitkExtractAirwaysTreeInfo_GGO_C clitkExtractAirwaysTreeInfo.ggo)
-    # ADD_EXECUTABLE(clitkExtractAirwaysTreeInfo clitkExtractAirwaysTreeInfo.cxx ${clitkExtractAirwaysTreeInfo_GGO_C})
-    # TARGET_LINK_LIBRARIES(clitkExtractAirwaysTreeInfo clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
-    # SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractAirwaysTreeInfo)
-
     WRAP_GGO(clitkExtractBones_GGO_C clitkExtractBones.ggo)
     ADD_EXECUTABLE(clitkExtractBones clitkExtractBones.cxx ${clitkExtractBones_GGO_C})
     TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractBones)
 
-    WRAP_GGO(clitkBool_GGO_C clitkBool.ggo)
-    ADD_EXECUTABLE(clitkBool clitkBool.cxx ${clitkBool_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkBool clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
-    SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkBool)
-
-    WRAP_GGO(clitkRelativePosition_GGO_C ../tools/clitkRelativePosition.ggo)
-
-    WRAP_GGO(clitkExtractMediastinum_GGO_C clitkExtractMediastinum.ggo)
-    ADD_EXECUTABLE(clitkExtractMediastinum clitkExtractMediastinum.cxx ${clitkExtractMediastinum_GGO_C}  ${clitkRelativePosition_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkExtractMediastinum clitkCommon clitkSegmentationGgoLib ${ITK_LIBRARIES})
-    SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractMediastinum)
-
-    WRAP_GGO(clitkExtractLymphStations_GGO_C clitkExtractLymphStations.ggo)
-    ADD_EXECUTABLE(clitkExtractLymphStations clitkExtractLymphStations.cxx clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx ${clitkExtractLymphStations_GGO_C} ${clitkRelativePosition_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkExtractLymphStations clitkSegmentationGgoLib clitkCommon vtkHybrid)
-    SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractLymphStations)
-
-    WRAP_GGO(clitkExtractMediastinalVessels_GGO_C clitkExtractMediastinalVessels.ggo)
-    ADD_EXECUTABLE(clitkExtractMediastinalVessels clitkExtractMediastinalVessels.cxx clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx ${clitkExtractMediastinalVessels_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkExtractMediastinalVessels clitkSegmentationGgoLib clitkCommon vtkHybrid)
-    SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractMediastinalVessels)
-
     WRAP_GGO(clitkMorphoMath_GGO_C clitkMorphoMath.ggo)
     ADD_EXECUTABLE(clitkMorphoMath clitkMorphoMath.cxx ${clitkMorphoMath_GGO_C})
     TARGET_LINK_LIBRARIES(clitkMorphoMath clitkCommon ${ITK_LIBRARIES})
     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkMorphoMath)
 
-    WRAP_GGO(clitkAnd_GGO_C clitkAnd.ggo)
-    ADD_EXECUTABLE(clitkAnd clitkAnd.cxx clitkAndGenericFilter.cxx ${clitkAnd_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkAnd clitkCommon ${ITK_LIBRARIES} )
-    SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkAnd)
-
-    WRAP_GGO(clitkRegionGrowing_GGO_C clitkRegionGrowing.ggo)
-    ADD_EXECUTABLE(clitkRegionGrowing clitkRegionGrowing.cxx clitkRegionGrowingGenericFilter.cxx ${clitkRegionGrowing_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon ${ITK_LIBRARIES})
-    SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkRegionGrowing)
-
     WRAP_GGO(clitkDecomposeAndReconstruct_GGO_C clitkDecomposeAndReconstruct.ggo)
     ADD_EXECUTABLE(clitkDecomposeAndReconstruct clitkDecomposeAndReconstruct.cxx clitkDecomposeAndReconstructGenericFilter.cxx ${clitkDecomposeAndReconstruct_GGO_C})
     TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon ${ITK_LIBRARIES})
@@ -82,12 +45,11 @@ IF(CLITK_BUILD_SEGMENTATION)
     ADD_EXECUTABLE(clitkMotionMask clitkMotionMask.cxx clitkMotionMaskGenericFilter.cxx ${clitkMotionMask_GGO_C})
     TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon ${ITK_LIBRARIES})
     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkMotionMask)
-
-    # WRAP_GGO(clitkTestFilter_GGO_C clitkTestFilter.ggo)
-    # ADD_EXECUTABLE(clitkTestFilter clitkTestFilter.cxx ${clitkTestFilter_GGO_C})
-    # TARGET_LINK_LIBRARIES(clitkTestFilter clitkSegmentationGgoLib clitkCommon vtkHybrid)
-    # SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkTestFilter)
     
+    WRAP_GGO(clitkRegionGrowing_GGO_C clitkRegionGrowing.ggo)
+    ADD_EXECUTABLE(clitkRegionGrowing clitkRegionGrowing.cxx ${clitkRegionGrowing_GGO_C} ${clitkRelativePosition_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon ${ITK_LIBRARIES})
+
     SET_TARGET_PROPERTIES(${SEGMENTATION_INSTALL} PROPERTIES INSTALL_RPATH "${VTK_DIR}:${ITK_DIR}" )  
     INSTALL (TARGETS ${SEGMENTATION_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)