X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=segmentation%2FclitkExtractBones.ggo;h=4938aa5639d71c303ea346c80631f947d8468bdb;hb=6f94b0c1ef2a28dd349ea0ee03c5e294d9197757;hp=581392bc57db42572263cd2dff8bc99e53a5ba2e;hpb=e008d74b0ecdc4ca2eaae8c429901a78f9ef5c31;p=clitk.git diff --git a/segmentation/clitkExtractBones.ggo b/segmentation/clitkExtractBones.ggo index 581392b..4938aa5 100644 --- a/segmentation/clitkExtractBones.ggo +++ b/segmentation/clitkExtractBones.ggo @@ -17,6 +17,15 @@ option "input" i "Input image filename" string yes option "output" o "Output image filename" string yes option "like" l "Resample like this image" string no +section "Smoothing (curvature anistropic diffusion)" + +option "smooth" - "smooth input image" flag off +option "spacing" - "Use image spacing" flag off +option "cond" - "Conductance parameter" double no default="3.0" +option "time" - "Time step (0.125 for 2D and 0.0625 for 3D)" double no default="0.0625" +option "iter" - "Iterations" double no default="5" + + section "Initial connected component labelling (CCL)" option "lower1" - "Lower threshold for CCL" double no default="100"