X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=segmentation%2FclitkExtractBones.ggo;h=fa265ef136ca924a8dd3911190950e16c2c0e6d8;hb=164e784d773cef093f46b6aed156269fe46bf676;hp=cd737e7954fe8a4f7b33e9c231e8dc49a9f8706f;hpb=5668d4a49a5a6b68dc80fa28f0f82b54187cb70c;p=clitk.git

diff --git a/segmentation/clitkExtractBones.ggo b/segmentation/clitkExtractBones.ggo
index cd737e7..fa265ef 100644
--- a/segmentation/clitkExtractBones.ggo
+++ b/segmentation/clitkExtractBones.ggo
@@ -40,4 +40,8 @@ option "upper2"		-	"Upper threshold for RG"		double	no 	default="1500"
 option "radius2"	-	"Neighborhood radius"			int	no 	multiple	default="1" 
 option "sampleRate2"	-	"Sample rate of label image for RG: number of voxels to skip between seeds"	int	no 	default="0" 
 
+section "Fill holes"
+option "doNotFillHoles"		-  "Do not fill holes if set"                 flag on
+option "dir"    	        d  "Directions (axes) to perform filling (defaults to 2,1,0)"	int multiple no
+
 option "noAutoCrop"	- 	"If set : do no crop final mask to BoundingBox"	                        flag 	on