X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=segmentation%2FclitkExtractMediastinum.ggo;h=4a42029569271ce141b3ae2739ddfdc9782211a7;hb=22681675b0ed087fd02fbd94968d5ea5251f5408;hp=490c673c60401d778071e3e1931fc055feee9122;hpb=e008d74b0ecdc4ca2eaae8c429901a78f9ef5c31;p=clitk.git

diff --git a/segmentation/clitkExtractMediastinum.ggo b/segmentation/clitkExtractMediastinum.ggo
index 490c673..4a42029 100644
--- a/segmentation/clitkExtractMediastinum.ggo
+++ b/segmentation/clitkExtractMediastinum.ggo
@@ -21,14 +21,18 @@ option "lung"          l	"Input lung mask filename"	  string  	yes
 option "lungBG"        -	"Lung Background"                 int           default="0" no
 option "lungLeft"      -	"Lung Left value"                 int           default="1" no
 option "lungRight"     -	"Lung Right value"                int           default="2" no
+option "trachea"       t	"Input trachea mask filename"	  string  	yes
+option "tracheaBG"     -	"Trachea Background"              int           default="0" no
+option "afdb"          a	"Input Anatomical Feature DB"     string  	no
 
 option "output"        o 	"Output lungs mask filename"      string 	yes
 
 section "Step 1 : Left/Right limits with lungs"
-
 option "spacing"     -	"Intermediate resampling spacing"         double no default="6"
-option "fuzzy1"	     -	"Fuzzy relative position threshold"	  double no default="0.6"
+option "fuzzy1"	     -	"Fuzzy relative position threshold"	  double no default="0.4"
 
 section "Step 2 : Ant/Post limits with bones"
-
 option "fuzzy2"	     -	"Fuzzy relative position threshold"	  double no default="0.6"
+
+section "Step 3 : Inf limits with Lung"
+option "fuzzy3"	     -	"Fuzzy relative position threshold"	  double no default="0.2"