X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=segmentation%2FclitkExtractMediastinumFilter.txx;fp=segmentation%2FclitkExtractMediastinumFilter.txx;h=b3e17bf719ba32047ea1b48e91c776cf9684e257;hb=9a67007d11721d89587c2a17397a11dc72c3120a;hp=312fd14ed01d518cddfed3236b5a0ff720526f00;hpb=338030186d56f371ab17cf99660bf92ab0dc07fb;p=clitk.git

diff --git a/segmentation/clitkExtractMediastinumFilter.txx b/segmentation/clitkExtractMediastinumFilter.txx
index 312fd14..b3e17bf 100644
--- a/segmentation/clitkExtractMediastinumFilter.txx
+++ b/segmentation/clitkExtractMediastinumFilter.txx
@@ -54,7 +54,7 @@ ExtractMediastinumFilter():
   SetForegroundValueLeftLung(1);
   SetForegroundValueRightLung(2);
   SetDistanceMaxToAnteriorPartOfTheVertebralBody(10);  
-  SetOutputMediastinumFilename("mediastinum.mhd");  
+  SetOutputMediastinumFilename("mediastinum.mha");  
   UseBonesOff();
 }
 //--------------------------------------------------------------------
@@ -250,9 +250,9 @@ GenerateOutputInformation() {
   left_lung = clitk::SetBackground<MaskImageType, MaskImageType>(left_lung, left_lung, 2, 1, false);
   right_lung = clitk::ResizeImageLike<MaskImageType>(right_lung, output, this->GetBackgroundValue());
   left_lung = clitk::ResizeImageLike<MaskImageType>(left_lung, output, this->GetBackgroundValue());
-  this->GetAFDB()->template SetImage<MaskImageType>("RightLung", "seg/RightLung.mhd", 
+  this->GetAFDB()->template SetImage<MaskImageType>("RightLung", "seg/RightLung.mha", 
                                                     right_lung, true);
-  this->GetAFDB()->template SetImage<MaskImageType>("LeftLung", "seg/LeftLung.mhd", 
+  this->GetAFDB()->template SetImage<MaskImageType>("LeftLung", "seg/LeftLung.mha", 
                                                     left_lung, true);
   this->GetAFDB()->Write();
   this->template StopCurrentStep<MaskImageType>(output);
@@ -319,12 +319,12 @@ GenerateOutputInformation() {
     bones_post = roiFilter->GetOutput();
     // writeImage<MaskImageType>(bones_post, "b_post.mhd");
 
-     // Now, insert this image in the AFDB
-     this->GetAFDB()->template SetImage<MaskImageType>("Bones_Post", "seg/Bones_Post.mhd", 
+    // Now, insert this image in the AFDB ==> (needed because used in the RelativePosition config file)
+    this->GetAFDB()->template SetImage<MaskImageType>("Bones_Post", "seg/Bones_Post.mha", 
                                                  bones_post, true);
-     this->GetAFDB()->template SetImage<MaskImageType>("Bones_Ant", "seg/Bones_Ant.mhd", 
+    this->GetAFDB()->template SetImage<MaskImageType>("Bones_Ant", "seg/Bones_Ant.mha", 
                                                  bones_ant, true);
-     this->GetAFDB()->Write();
+    this->GetAFDB()->Write();
 
     this->template StopCurrentStep<MaskImageType>(output);
   }