X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=segmentation%2FclitkExtractPatient.ggo;h=f4944409a1b10e6286a9930b1046b659a2301ece;hb=aeb947ddd800ab06cf4916c9371bca3832056b4f;hp=6b15a6af14e7e167e2687bea3556f124a52b4906;hpb=5668d4a49a5a6b68dc80fa28f0f82b54187cb70c;p=clitk.git

diff --git a/segmentation/clitkExtractPatient.ggo b/segmentation/clitkExtractPatient.ggo
index 6b15a6a..f494440 100644
--- a/segmentation/clitkExtractPatient.ggo
+++ b/segmentation/clitkExtractPatient.ggo
@@ -10,6 +10,7 @@ option "verboseStep"    -  "Verbose each step"		  flag		off
 option "writeStep"      w  "Write image at each step"	  flag		off
 option "verboseOption"  -  "Display options values"       flag          off
 option "verboseWarningOff" -  "Do not display warning"    flag          off
+option "verboseMemory"  -  "Display memory usage"         flag          off
 
 section "I/O"
 
@@ -21,6 +22,7 @@ section "Binarize"
 
 option "lower"		-	"Initial lower threshold"	double		no  	
 option "upper"		-	"Initial upper threshold"	double		no  	default="-300"
+option "openingRadius"    - "Radius for opening after threshold"  int no  default="0"
 
 section "First Label Image (air=1)"
 
@@ -49,6 +51,6 @@ option  "remove"  	-		"Labels to remove"			int 	no	multiple
 section "Clean-up"
 
 option "openClose"	- 	"Perform morphological opening and closing with unit radius"	flag 	off
-option "noAutoCrop"	- 	"If set : do no crop final mask to BoundingBox"	                        flag 	on
+option "noAutoCrop"	- 	"If set : do no crop final mask to BoundingBox"	                        flag 	off