X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=segmentation%2FclitkRegionGrowing.ggo;h=60bcae23c30e45150347d614630e6af94bf6f049;hb=af5378525c594d0adb17104cf333e25976d3ac91;hp=59cb77c60a90a775aa080cca262b40d5574a4073;hpb=08d1fd56ac1d08bd228d9e557f5472a395e9b708;p=clitk.git

diff --git a/segmentation/clitkRegionGrowing.ggo b/segmentation/clitkRegionGrowing.ggo
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-#File clitkRegionGrowing.ggo
-package "clitkRegionGrowing"
-version "1.0"
-purpose "Region growing from a seed point using various types of conditions to control the growing"
-
-option "config"	  	-	"Config file"			  string  	no
-option "verbose"   	v   	"Verbose"			  flag		off
-
-section "I/O"
-
-option "input"		i	"Input image filename"		  string  	yes
-option "output"    	o   	"Output image filename"		  string 	yes
-
-
-section "Parameters"
-
-option "type"		t	"Region growing filter type: 0=threshold , 1=neighborhood-threshold , 2=confidence , 3= locally-adaptive-threshold, 4= explosion-controlled-threshold" int	no	default="0"
-option "lower"    	l   	"1,2,3,4: Lower threshold value"		  double	no	default="0"
-option "upper"    	u   	"1,2,3,4: Upper threshold value"		  double 	no	default="1"
-option "maxUpper"    	-   	"4: Maximum upper threshold value"		  double 	no	default="2000"
-option "minLower"    	-   	"4: Minimum lower threshold value"		  double 	no	default="-1000"
-option "step"    	-   	"4: Threshold step size"			  double 	no	default="64.0"
-option "minStep"    	-   	"4: Minimum threshold step size"		  double 	no	default="1"
-option "adaptLower" 	-   	"3,4: (locally) adapt lower thresholding"	  flag 		off
-option "adaptUpper" 	-   	"3,4: (locally) adapt upper thresholding"	  flag 		off
-option "multiplier"    	m   	"2-4: (2-3) accept if within mean+-mutiplier*SD, (4) explosion if size increases multiplier times"	double	no	default="2.0"
-option "seed"    	s   	"Seed index postion (in voxels)"	  	  int 		multiple 	no	default="0"	
-option "pad"    	p   	"The replace padding value"	  		  double 	no		default="1.0"	
-option "radius"    	r   	"1-3: The radius of the neighborhood"  		  int		no		multiple 	default="1"
-option "maxSD"		-	"3: Limit to SD"				  double	no 	 
-option "full"		-	"4: use full connectivity (not implemented yet)"  flag		off 	 
-option "iter"		-	"2: Iterations" 				  int		no 	default="5"
-