X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src%2FcreaImageIOSimpleView.cpp;h=96d0e7442bda4713e5f973fc01d1cf9c04df0494;hb=f4345fcbbb606af15d5af72b6179d5103ff75565;hp=9ca576c26a1039018cf09247ccab67d6fd059199;hpb=40c5cfdc77e721db1507ffdac3625b7813f66f4c;p=creaImageIO.git diff --git a/src/creaImageIOSimpleView.cpp b/src/creaImageIOSimpleView.cpp index 9ca576c..96d0e74 100644 --- a/src/creaImageIOSimpleView.cpp +++ b/src/creaImageIOSimpleView.cpp @@ -1,9 +1,41 @@ +/* +# --------------------------------------------------------------------- +# +# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image +# pour la Santé) +# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton +# Previous Authors : Laurent Guigues, Jean-Pierre Roux +# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil +# +# This software is governed by the CeCILL-B license under French law and +# abiding by the rules of distribution of free software. You can use, +# modify and/ or redistribute the software under the terms of the CeCILL-B +# license as circulated by CEA, CNRS and INRIA at the following URL +# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html +# or in the file LICENSE.txt. +# +# As a counterpart to the access to the source code and rights to copy, +# modify and redistribute granted by the license, users are provided only +# with a limited warranty and the software's author, the holder of the +# economic rights, and the successive licensors have only limited +# liability. +# +# The fact that you are presently reading this means that you have had +# knowledge of the CeCILL-B license and that you accept its terms. +# ------------------------------------------------------------------------ +*/ + + #include "creaImageIOSimpleView.h" +#include "boost/filesystem/operations.hpp" +#include "boost/filesystem/fstream.hpp" namespace creaImageIO { - - bool SimpleView::readFile(std::vector i_filenames, std::vector &i_img) + bool SimpleView::readFile( std::vector i_filenames, // in information names + std::vector i_attr, // in information attributes names + std::vector > &i_imgAttr, // out information attributes names-values + std::vector &i_img) // out information vtkImageData { bool bresult, bfinal = true; ImageReader *mReader = new ImageReader(); @@ -13,23 +45,31 @@ namespace creaImageIO bresult = mReader->CanRead((*it).c_str()); if(bresult) { - i_img.push_back(mReader->ReadImage((*it).c_str())); - } - else - { + std::map mapAttr; + mReader->getAttributes( (*it).c_str() , mapAttr, i_attr ); // filename, outMapAttr-NameValue, inVectAttributeName + i_imgAttr.push_back( mapAttr ); + + //UnMosaic step.. + + i_img.push_back( mReader->ReadImage( (*it).c_str() ) ); + } else { + printf("ERROR. Impossible to read file %s\n", (*it).c_str() ); bfinal = false; - } - } + } // if + } // for delete mReader; - return bfinal; - + return bfinal; } - bool SimpleView::readDirectory(const std::string i_pathname, std::vector &i_imgs) + + bool SimpleView::readDirectory( const std::string i_pathname, // in information names + std::vector i_attr, // in information attributes names + std::vector > &i_imgAttr, // out information attributes names-values + std::vector &i_imgs) // out information vtkImageData { bool bresult = true; ImageReader *mReader = new ImageReader(); - + std::vector names; bresult = boost::filesystem::exists( i_pathname ); if (bresult) { @@ -39,14 +79,28 @@ namespace creaImageIO { if (!boost::filesystem::is_directory(itr->status())) { - if( mReader->CanRead(itr->string()) ) + if( mReader->CanRead(itr->path().string()) ) { - i_imgs.push_back( mReader->ReadImage(itr->string()) ); + names.push_back(itr->path().string()); } } } + std::sort (names.begin(), names.end()); // make sure names are in lexicographical order + int lgr = (int)names.size(); + + for(int i=0; i mapAttr; + mReader->getAttributes( names[i] , mapAttr, i_attr ); // filename, outMapAttr-NameValue, inVectAttributeName + i_imgAttr.push_back( mapAttr ); + + //UnMosaic step.. + + i_imgs.push_back( mReader->ReadImage(names[i]) ); + } } return bresult; } } -