X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src%2FgdcmDicomDir.cxx;h=de32b9533d7e065c8a4cb27bd61afa6553dc7e3b;hb=7c8b232fb62e92da08750b81d3126651f60b8f3f;hp=a67ed04bbf9762a84894203b46983a7423ba5cc2;hpb=9ca0e4bb2208be93bebf21d0c5d75c8018e7605a;p=gdcm.git diff --git a/src/gdcmDicomDir.cxx b/src/gdcmDicomDir.cxx index a67ed04b..de32b953 100644 --- a/src/gdcmDicomDir.cxx +++ b/src/gdcmDicomDir.cxx @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: gdcmDicomDir.cxx,v $ Language: C++ - Date: $Date: 2005/06/24 10:55:58 $ - Version: $Revision: 1.142 $ + Date: $Date: 2005/07/12 17:08:12 $ + Version: $Revision: 1.148 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -21,8 +21,10 @@ // PS 3.3-2003, pages 731-750 //----------------------------------------------------------------------------- #include "gdcmDicomDir.h" +#include "gdcmDicomDirObject.h" #include "gdcmDicomDirStudy.h" #include "gdcmDicomDirSerie.h" +#include "gdcmDicomDirVisit.h" #include "gdcmDicomDirImage.h" #include "gdcmDicomDirPatient.h" #include "gdcmDicomDirMeta.h" @@ -117,6 +119,7 @@ DicomDir::DicomDir() :Document( ) { Initialize(); // sets all private fields to NULL + ParseDir = false; NewMeta(); } @@ -164,11 +167,52 @@ DicomDir::~DicomDir() //----------------------------------------------------------------------------- // Public +/** + * \brief Loader. use SetLoadMode(), SetFileName() before ! + * @return false if file cannot be open or no swap info was found, + * or no tag was found. + */ +bool DicomDir::Load( ) +{ + // We should clean out anything that already exists. + Initialize(); // sets all private fields to NULL + + if (!ParseDir) + { + if ( ! this->Document::Load( ) ) + return false; + } + return DoTheLoadingJob( ); +} + +/** + * \brief Loader. (DEPRECATED : not to break the API) + * @param fileName file to be open for parsing + * @return false if file cannot be open or no swap info was found, + * or no tag was found. + */ bool DicomDir::Load(std::string const &fileName ) { - Filename = fileName; // We should clean out anything that already exists. + Initialize(); // sets all private fields to NULL + + SetFileName( fileName ); + if (!ParseDir) + { + if ( ! this->Document::Load( ) ) + return false; + } + return DoTheLoadingJob( ); +} +/** + * \brief Does the Loading Job (internal use only) + * @return false if file cannot be open or no swap info was found, + * or no tag was found. + */ +bool DicomDir::DoTheLoadingJob( ) +{ + // We should clean out anything that already exists. Initialize(); // sets all private fields to NULL if (!ParseDir) @@ -180,10 +224,14 @@ bool DicomDir::Load(std::string const &fileName ) { return false; } - Document::Load(fileName); + if (!Document::Load() ) + { + return false; + } + if ( GetFirstEntry() == 0 ) // when user passed a Directory to parse { - gdcmWarningMacro( "Entry HT empty for file: "<< fileName); + gdcmWarningMacro( "Entry HT empty for file: "<< GetFileName()); return false; } // Directory record sequence @@ -191,7 +239,7 @@ bool DicomDir::Load(std::string const &fileName ) if ( !e ) { gdcmWarningMacro( "NO 'Directory record sequence' (0x0004,0x1220)" - << " in file " << fileName); + << " in file " << GetFileName()); return false; } else @@ -201,7 +249,7 @@ bool DicomDir::Load(std::string const &fileName ) { // Only if user passed a root directory // ------------------------------------ - if ( fileName == "." ) + if ( GetFileName() == "." ) { // user passed '.' as Name // we get current directory name @@ -210,8 +258,8 @@ bool DicomDir::Load(std::string const &fileName ) SetFileName( dummy ); // will be converted into a string } NewMeta(); - gdcmWarningMacro( "Parse directory and create the DicomDir : " << Filename ); - + gdcmWarningMacro( "Parse directory and create the DicomDir : " + << GetFileName() ); ParseDirectory(); } return true; @@ -558,7 +606,8 @@ void DicomDir::CreateDicomDirChainedList(std::string const &path) } f = new File( ); - f->SetLoadMode(LoadMode); // we allow user not to load Sequences... + f->SetLoadMode(LoadMode); // we allow user not to load Sequences, or Shadow + // groups, or ...... f->Load( it->c_str() ); // if ( !f ) @@ -702,54 +751,76 @@ void DicomDir::CreateDicomDir() continue; } - if ( v == "PATIENT " ) + // A decent DICOMDIR has much more images than series, + // more series than studies, and so on. + // This is the right order to preform the tests + + if ( v == "IMAGE " ) { - si = new DicomDirPatient(true); - if ( !AddPatientToEnd( static_cast(si)) ) + si = new DicomDirImage(true); + if ( !AddImageToEnd( static_cast(si)) ) { delete si; si = NULL; - gdcmErrorMacro( "Add PatientToEnd failed"); + gdcmErrorMacro( "Add AddImageToEnd failed"); } } - else if ( v == "STUDY " ) + else if ( v == "SERIES" ) { - si = new DicomDirStudy(true); - if ( !AddStudyToEnd( static_cast(si)) ) + si = new DicomDirSerie(true); + if ( !AddSerieToEnd( static_cast(si)) ) { delete si; si = NULL; - gdcmErrorMacro( "Add AddStudyToEnd failed"); + gdcmErrorMacro( "Add AddSerieToEnd failed"); } } - else if ( v == "SERIES" ) + else if ( v == "VISIT " ) { - si = new DicomDirSerie(true); - if ( !AddSerieToEnd( static_cast(si)) ) + si = new DicomDirVisit(true); + if ( !AddVisitToEnd( static_cast(si)) ) { delete si; si = NULL; - gdcmErrorMacro( "Add AddSerieToEnd failed"); + gdcmErrorMacro( "Add AddVisitToEnd failed"); } } - else if ( v == "IMAGE " ) + else if ( v == "STUDY " ) { - si = new DicomDirImage(true); - if ( !AddImageToEnd( static_cast(si)) ) + si = new DicomDirStudy(true); + if ( !AddStudyToEnd( static_cast(si)) ) { delete si; si = NULL; - gdcmErrorMacro( "Add AddImageToEnd failed"); + gdcmErrorMacro( "Add AddStudyToEnd failed"); + } + } + else if ( v == "PATIENT " ) + { + si = new DicomDirPatient(true); + if ( !AddPatientToEnd( static_cast(si)) ) + { + delete si; + si = NULL; + gdcmErrorMacro( "Add PatientToEnd failed"); } } else { - // It was not a 'PATIENT', nor a 'STUDY', nor a 'SERIE', - // neither an 'IMAGE' SQItem. Skip to next item. - continue; + // It was neither a 'PATIENT', nor a 'STUDY', nor a 'SERIE', + // nor an 'IMAGE' SQItem. Skip to next item. + gdcmWarningMacro( " -------------------------------------------" + << "a non PATIENT/STUDY/SERIE/IMAGE SQItem was found : " + << v); + + // FIXME : deal with other item types ! + tmpSI=s->GetNextSQItem(); // To avoid infinite loop + continue; } if ( si ) - MoveSQItem(si,tmpSI); + //MoveSQItem(si,tmpSI); // Old code : Copies each Entry + // -and then removes the source- + si->MoveObject(tmpSI); // New code : Copies the List tmpSI=s->GetNextSQItem(); } @@ -803,6 +874,26 @@ bool DicomDir::AddSerieToEnd(DicomDirSerie *dd) return false; } +/** + * \brief AddVisitToEnd + * @param dd SQ Item to enqueue to the DicomDirVisit chained List + */ +bool DicomDir::AddVisitToEnd(DicomDirVisit *dd) +{ + if ( Patients.size() > 0 ) + { + ListDicomDirPatient::iterator itp = Patients.end(); + itp--; + + DicomDirStudy *study = (*itp)->GetLastStudy(); + if ( study ) + { + study->AddVisit(dd); + return true; + } + } + return false; +} /** * \brief AddImageToEnd * @param dd SQ Item to enqueue to the DicomDirImage chained List @@ -866,7 +957,7 @@ void DicomDir::SetElements(std::string const &path, VectDocument const &list) first = true; } - // if new Study Deal with 'STUDY' Elements + // if new Study, deal with 'STUDY' Elements if ( studCurInstanceUID != studPrevInstanceUID || studCurID != studPrevID || first ) { @@ -874,7 +965,7 @@ void DicomDir::SetElements(std::string const &path, VectDocument const &list) first = true; } - // if new Serie Deal with 'SERIE' Elements + // if new Serie, deal with 'SERIE' Elements if ( serCurInstanceUID != serPrevInstanceUID || serCurID != serPrevID || first ) { @@ -1043,7 +1134,7 @@ void DicomDir::SetElement(std::string const &path, DicomDirType type, * @param src source SQItem */ void DicomDir::MoveSQItem(DocEntrySet *dst,DocEntrySet *src) -{ +{ DocEntry *entry; entry = src->GetFirstEntry();