X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src%2FgdcmDocEntry.cxx;h=f343fb60846218253972b1bf4c0bbb6c83e622b0;hb=5ac625c72835828d687ebdef878691d0913ae41b;hp=61cc963477ee0e5d85a5315dd215c659715aaa9a;hpb=1d69b92978803204089d270599133917d944c651;p=gdcm.git diff --git a/src/gdcmDocEntry.cxx b/src/gdcmDocEntry.cxx index 61cc9634..f343fb60 100644 --- a/src/gdcmDocEntry.cxx +++ b/src/gdcmDocEntry.cxx @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: gdcmDocEntry.cxx,v $ Language: C++ - Date: $Date: 2004/10/12 04:35:45 $ - Version: $Revision: 1.27 $ + Date: $Date: 2005/11/29 12:48:46 $ + Version: $Revision: 1.79 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -18,111 +18,61 @@ #include "gdcmDocEntry.h" #include "gdcmTS.h" +#include "gdcmVR.h" #include "gdcmGlobal.h" #include "gdcmUtil.h" +#include "gdcmDebug.h" #include // for std::ios::left, ... +#include + namespace gdcm { - -// CLEAN ME -#define MAX_SIZE_PRINT_ELEMENT_VALUE 64 - //----------------------------------------------------------------------------- + // Constructor / Destructor /** - * \ingroup DocEntry * \brief Constructor from a given DictEntry * @param in Pointer to existing dictionary entry */ -DocEntry::DocEntry(DictEntry* in) +DocEntry::DocEntry(DictEntry *in) { ImplicitVR = false; DicomDict = in; - SetKey( in->GetKey( ) ); Offset = 0 ; // To avoid further missprinting + + // init some variables + ReadLength = 0; + Length = 0; + + gdcmAssertMacro(DicomDict); + DicomDict->Register(); } -//----------------------------------------------------------------------------- -// Print /** - * \ingroup DocEntry - * \brief Prints the common part of ValEntry, BinEntry, SeqEntry - * @param os ostream we want to print in + * \brief Destructor from a given DictEntry */ -void DocEntry::Print(std::ostream& os) +DocEntry::~DocEntry() { - PrintLevel = 2; // FIXME - - size_t o; - unsigned short int g, e; - std::string st; - TSKey v; - std::string d2, vr; - std::ostringstream s; - uint32_t lgth; - - g = GetGroup(); - e = GetElement(); - o = GetOffset(); - vr = GetVR(); - - s << DictEntry::TranslateToKey(GetGroup(),GetElement()); + gdcmAssertMacro(DicomDict); - if (PrintLevel >= 2) - { - s << " lg : "; - lgth = GetReadLength(); // ReadLength, as opposed to UsableLength - if (lgth == 0xffffffff) - { - st = Util::Format("x(ffff)"); // I said : "x(ffff)" ! - s.setf(std::ios::left); - s << std::setw(10-st.size()) << " "; - s << st << " "; - s.setf(std::ios::left); - s << std::setw(8) << "-1"; - } - else - { - st = Util::Format("x(%x)",lgth); - s.setf(std::ios::left); - s << std::setw(10-st.size()) << " "; - s << st << " "; - s.setf(std::ios::left); - s << std::setw(8) << lgth; - } - s << " Off.: "; - st = Util::Format("x(%x)",o); - s << std::setw(10-st.size()) << " "; - s << st << " "; - s << std::setw(8) << o; - } - - s << "[" << vr << "] "; - - if (PrintLevel >= 1) - { - s.setf(std::ios::left); - s << std::setw(66-GetName().length()) << " "; - } - - s << "[" << GetName()<< "]"; - os << s.str(); + DicomDict->Unregister(); } +//----------------------------------------------------------------------------- +// Public /** - * \ingroup DocEntry - * \brief Writes the common part of any ValEntry, BinEntry, SeqEntry - * @param fp already open file pointer - * @param filetype type of the file to be written + * \brief Writes the common part of any DataEntry, SeqEntry + * @param fp already open ofstream pointer + * @param filetype type of the file (ACR, ImplicitVR, ExplicitVR, ...) */ -void DocEntry::Write(FILE* fp, FileType filetype) +void DocEntry::WriteContent(std::ofstream *fp, FileType filetype) { uint32_t ffff = 0xffffffff; uint16_t group = GetGroup(); - VRKey vr = GetVR(); + VRKey vr = GetVR(); uint16_t el = GetElement(); - uint32_t lgr = GetReadLength(); + uint32_t lgth = GetLength(); if ( group == 0xfffe && el == 0x0000 ) { @@ -131,86 +81,92 @@ void DocEntry::Write(FILE* fp, FileType filetype) // we just *always* ignore spurious fffe|0000 tag ! return; } - // // ----------- Writes the common part // - fwrite ( &group,(size_t)2 ,(size_t)1 ,fp); //group - fwrite ( &el, (size_t)2 ,(size_t)1 ,fp); //element - - if ( filetype == ExplicitVR ) + // To avoid gdcm to propagate oddities. + // --> Don't forget to *write* an even length value + if (lgth%2) + lgth ++; + + // ----------- Writes the common part : the Tag + binary_write( *fp, group); //group number + binary_write( *fp, el); //element number + + // Dicom V3 group 0x0002 is *always* Explicit VR ! + if ( filetype == ExplicitVR || filetype == JPEG || group == 0x0002 ) { - // Special case of delimiters: + +// ----------- Writes the common part : the VR + the length + + // Special case of delimiters: if (group == 0xfffe) { // Delimiters have NO Value Representation // Hence we skip writing the VR. + // // In order to avoid further troubles, we choose to write them // as 'no-length' Item Delimitors (we pad by writing 0xffffffff) - // The end of a given Item will be found when : - // - a new Item Delimitor Item is encountered (the Seq goes on) - // - a Sequence Delimitor Item is encountered (the Seq just ended) + // We shall force the end of a given SeqItem by writting + // a Item Delimitation Item (fffe, e00d) - // TODO : verify if the Sequence Delimitor Item was forced during Parsing - - int ff = 0xffffffff; - fwrite (&ff,(size_t)4 ,(size_t)1 ,fp); + uint32_t ff = 0xffffffff; + binary_write(*fp, ff); return; } - uint16_t z = 0; - uint16_t shortLgr = lgr; + uint16_t zero = 0; + uint16_t shortLgr = (uint16_t)lgth; - if (vr == "unkn") + if( IsVRUnknown() ) { - // Unknown was 'written' - // deal with Little Endian - fwrite ( &shortLgr,(size_t)2 ,(size_t)1 ,fp); - fwrite ( &z, (size_t)2 ,(size_t)1 ,fp); + // GDCM_VRUNKNOWN was stored in the Entry VR; + // deal with Entry as if TS were Implicit VR + + binary_write(*fp, lgth); } else { - fwrite (vr.c_str(),(size_t)2 ,(size_t)1 ,fp); - - if ( (vr == "OB") || (vr == "OW") || (vr == "SQ") || (vr == "UN") ) + binary_write(*fp, vr.str()); + + // See PS 3.5-2004 page 33, 36 + if ( (vr == "SQ") || (vr == "OB") || (vr == "OW") || (vr == "OF") + || (vr == "UN") || (vr == "UT") ) { - fwrite ( &z, (size_t)2 ,(size_t)1 ,fp); + binary_write(*fp, zero); if (vr == "SQ") { // we set SQ length to ffffffff // and we shall write a Sequence Delimitor Item // at the end of the Sequence! - fwrite ( &ffff,(size_t)4 ,(size_t)1 ,fp); + binary_write(*fp, ffff); } else { - fwrite ( &lgr,(size_t)4 ,(size_t)1 ,fp); + binary_write(*fp, lgth); } } else { - fwrite ( &shortLgr,(size_t)2 ,(size_t)1 ,fp); + binary_write(*fp, shortLgr); } } } else // IMPLICIT VR { +// ----------- Writes the common part : the VR if (vr == "SQ") { - fwrite ( &ffff,(size_t)4 ,(size_t)1 ,fp); + binary_write(*fp, ffff); } else { - fwrite ( &lgr,(size_t)4 ,(size_t)1 ,fp); + binary_write(*fp, lgth); } } } -//----------------------------------------------------------------------------- -// Public - /** - * \ingroup DocEntry * \brief Gets the full length of the elementary DocEntry (not only value * length) depending on the VR. */ @@ -236,31 +192,24 @@ uint32_t DocEntry::GetFullLength() } /** - * \ingroup DocEntry - * \brief Copies all the attributes from an other DocEntry + * \brief tells us if entry is the last one of a 'no length' SequenceItem + * (fffe,e00d) */ -void DocEntry::Copy (DocEntry* e) +bool DocEntry::IsItemDelimitor() { - DicomDict = e->DicomDict; - UsableLength = e->UsableLength; - ReadLength = e->ReadLength; - ImplicitVR = e->ImplicitVR; - Offset = e->Offset; - PrintLevel = e->PrintLevel; - // TODO : remove DocEntry SQDepth + return (GetGroup() == 0xfffe && GetElement() == 0xe00d); } /** - * \ingroup DocEntry - * \brief tells us if entry is the last one of a 'no length' SequenceItem - * (fffe,e00d) + * \brief tells us if entry is the first one of an Item + * (fffe,e000) */ -bool DocEntry::IsItemDelimitor() +bool DocEntry::IsItemStarter() { - return (GetGroup() == 0xfffe && GetElement() == 0xe00d); + return (GetGroup() == 0xfffe && GetElement() == 0xe000); } + /** - * \ingroup DocEntry * \brief tells us if entry is the last one of a 'no length' Sequence * (fffe,e0dd) */ @@ -269,13 +218,96 @@ bool DocEntry::IsSequenceDelimitor() return (GetGroup() == 0xfffe && GetElement() == 0xe0dd); } +/** + * \brief Copies all the attributes from an other DocEntry + * @param doc entry to copy from + */ +void DocEntry::Copy(DocEntry *doc) +{ + Length = doc->Length; + ReadLength = doc->ReadLength; + ImplicitVR = doc->ImplicitVR; + Offset = doc->Offset; +} + //----------------------------------------------------------------------------- // Protected - //----------------------------------------------------------------------------- // Private //----------------------------------------------------------------------------- +// Print +/** + * \brief Prints the common part of DataEntry, SeqEntry + * @param os ostream we want to print in + * @param indent Indentation string to be prepended during printing + */ +void DocEntry::Print(std::ostream &os, std::string const & ) +{ + size_t o; + std::string st; + TSKey v; + std::string d2; + VRKey vr; + std::ostringstream s; + uint32_t lgth; + + o = GetOffset(); + vr = GetVR(); + if ( vr == GDCM_VRUNKNOWN ) + vr = " "; + + s << DictEntry::TranslateToKey(GetGroup(),GetElement()); + if (PrintLevel >= 2) + { + s << " lg : "; + lgth = GetReadLength(); // ReadLength, as opposed to (usable) Length + if (lgth == 0xffffffff) + { + st = " ffff "; + s.setf(std::ios::left); + s << std::setw(4); + s << " x(ffff) "; + s.setf(std::ios::left); + s << std::setw(8) << "-1"; + } + else + { + st = Util::Format("x(%x)",lgth); // we may keep it + s.setf(std::ios::left); + s << std::setw(11-st.size()) << " "; + s << st << " "; + s.setf(std::ios::left); + s << std::setw(8) << lgth; + } + s << " Off.: "; + st = Util::Format("x(%x)",o); // we may keep it + s << std::setw(11-st.size()) << " "; + s << st << " "; + s << std::setw(8) << o; + } + if (PrintLevel >= 1) + s << " "; + + s << "[" << vr << "] "; + + std::string name; + if ( GetElement() == 0x0000 ) + name = "Group Length"; + else + name = GetName(); + + if (PrintLevel >= 1) + { + s.setf(std::ios::left); + s << std::setw(66-name.length()) << " "; + } + + s << "[" << name << "]"; + os << s.str(); +} + +//----------------------------------------------------------------------------- } // end namespace gdcm