X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src%2FgdcmFile.cxx;h=b21463b038b616c13f9afe77a69684ef461a12db;hb=d8e3f21ed504242ce13fdf2f223520f126001a13;hp=9d435e133f60c9cc2783907bc7d676fbe47ea751;hpb=247c979db58d7bfd1d65029de05f4142a534c4c8;p=gdcm.git

diff --git a/src/gdcmFile.cxx b/src/gdcmFile.cxx
index 9d435e13..b21463b0 100644
--- a/src/gdcmFile.cxx
+++ b/src/gdcmFile.cxx
@@ -3,8 +3,8 @@
   Program:   gdcm
   Module:    $RCSfile: gdcmFile.cxx,v $
   Language:  C++
-  Date:      $Date: 2005/10/25 15:28:49 $
-  Version:   $Revision: 1.296 $
+  Date:      $Date: 2005/11/05 13:24:39 $
+  Version:   $Revision: 1.302 $
                                                                                 
   Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
   l'Image). All rights reserved. See Doc/License.txt or
@@ -19,21 +19,21 @@
 //
 // --------------  Remember ! ----------------------------------
 //
-// Image Position Patient                              (0020,0032):
+// Image Position (Patient)                            (0020,0032):
 // If not found (ACR_NEMA) we try Image Position       (0020,0030)
 // If not found (ACR-NEMA), we consider Slice Location (0020,1041)
 //                                   or Location       (0020,0050) 
 //                                   as the Z coordinate, 
 // 0. for all the coordinates if nothing is found
 //
-// Image Position (Patient) (0020,0032) VM=3 What is it used for?
+// Image Position (Patient) (0020,0032) VM=3
 // -->
 //  The attribute Patient Orientation (0020,0020) from the General Image Module 
 // is of type 2C and has the condition Required if image does not require 
 // Image Orientation (0020,0037) and Image Position (0020,0032). 
 // However, if the image does require the attributes 
 // - Image Orientation (Patient) (0020,0037), VM=6
-// - Image Position Patient (0020,0032), VM=3
+// - Image Position (Patient)    (0020,0032), VM=3
 // then attribute Patient Orientation (0020,0020) should not be present
 //  in the images.
 //
@@ -65,7 +65,7 @@
 // FFDR = Feet First-Decubitus Right
 // FFDL = Feet First-Decubitus Left
 
-//  we can also find      
+//  we can also find (non standard!)     
 
 // SEMIERECT
 // SUPINE
@@ -469,9 +469,13 @@ float File::GetXSpacing()
    {
       nbValue = entry->GetValueCount();
       // Can't use IsValueCountValid because of the complex heuristic.
+      if( nbValue !=2 )
+         gdcmWarningMacro("ImagerPixelSpacing (0x0018,0x1164) "
+         << "has a wrong number of values :" << nbValue);
+     
       if( nbValue >= 3 )
          xspacing = (float)entry->GetValue(2);
-      if( nbValue >= 2 )
+      else if( nbValue >= 2 )
          xspacing = (float)entry->GetValue(1);
       else
          xspacing = (float)entry->GetValue(0);
@@ -489,6 +493,10 @@ float File::GetXSpacing()
    if( entry )
    {
       nbValue = entry->GetValueCount();
+      if( nbValue !=2 )
+         gdcmWarningMacro("PixelSpacing (0x0018,0x0030) "
+          << "has a wrong number of values :" << nbValue);      
+      
       if( nbValue >= 3 )
          xspacing = (float)entry->GetValue(2);
       else if( nbValue >= 2 )
@@ -863,7 +871,6 @@ int File::GetPlanarConfiguration()
    DataEntry *entry = GetDataEntry(0x0028,0x0006);
    if( !entry )
    {
-      gdcmWarningMacro( "Not found : Planar Configuration (0028,0006)");
       return 0;
    }
    return (int)entry->GetValue(0);
@@ -1472,19 +1479,18 @@ bool File::Write(std::string fileName, FileType writetype)
       e0000->SetString(sLen.str());
    }
 
-   // Derma?.dcm does not have it...let's remove it  FIXME FIXME
+   // FIXME : Derma?.dcm does not have it...let's remove it ?!? JPRx
    if( writetype != JPEG )
-     {
-     int i_lgPix = GetEntryLength(GrPixel, NumPixel);
-     if (i_lgPix != -2)
-       {
-       // no (GrPixel, NumPixel) element
-       std::string s_lgPix = Util::Format("%d", i_lgPix+12);
-       s_lgPix = Util::DicomString( s_lgPix.c_str() );
-       InsertEntryString(s_lgPix,GrPixel, 0x0000);
-       }
-     }
-
+   {
+      int i_lgPix = GetEntryLength(GrPixel, NumPixel);
+      if (i_lgPix != -2)
+      {
+         // no (GrPixel, NumPixel) element
+         std::string s_lgPix = Util::Format("%d", i_lgPix+12);
+         s_lgPix = Util::DicomString( s_lgPix.c_str() );
+         InsertEntryString(s_lgPix,GrPixel, 0x0000);   
+      }
+   }
    Document::WriteContent(fp, writetype);
 
    fp->close();
@@ -1795,9 +1801,9 @@ void File::ReadEncapsulatedBasicOffsetTable()
          uint32_t val = BasicOffsetTableItemValue[i];
          BasicOffsetTableItemValue[i] 
            = (  (val<<24)               | ((val<<8)  & 0x00ff0000) | 
-              ((val>>8)  & 0x0000ff00) |  (val>>24)               );
+              ( (val>>8)  & 0x0000ff00) |  (val>>24)               );
 #endif
-         gdcmWarningMacro( "Read one length for: " << 
+         gdcmDebugMacro( "Read one length for: " << 
                           std::hex << BasicOffsetTableItemValue[i] );
       }