X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src%2FgdcmFile.h;h=219eddbbeddbc2bf900aa1d02f39b613e760279c;hb=a4e827eb6e652bf8ff0a179e810da297d3c9a628;hp=361bc3d81285154b3360d1b89e92decc94cf8e1a;hpb=e28b183ba68aa3cc84a44a779a31f9d906a1ad2f;p=gdcm.git diff --git a/src/gdcmFile.h b/src/gdcmFile.h index 361bc3d8..219eddbb 100644 --- a/src/gdcmFile.h +++ b/src/gdcmFile.h @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: gdcmFile.h,v $ Language: C++ - Date: $Date: 2004/10/18 12:49:22 $ - Version: $Revision: 1.63 $ + Date: $Date: 2005/01/11 15:15:38 $ + Version: $Revision: 1.93 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -19,92 +19,123 @@ #ifndef GDCMFILE_H #define GDCMFILE_H -#include "gdcmCommon.h" -#include "gdcmHeader.h" -#include "gdcmPixelConvert.h" +#include +#include "gdcmBase.h" namespace gdcm { - +class Header; +class ValEntry; +class BinEntry; +class PixelReadConvert; +class PixelWriteConvert; +class DocEntryArchive; //----------------------------------------------------------------------------- -/* - * In addition to Dicom header exploration, this class is designed +/** + * \brief In addition to Dicom Header exploration, this class is designed * for accessing the image/volume content. One can also use it to * write Dicom/ACR-NEMA/RAW files. */ -class GDCM_EXPORT File +class GDCM_EXPORT File : public Base { public: - File( Header* header ); - File( std::string const& filename ); + enum FileMode + { + WMODE_RAW, + WMODE_RGB + }; + +public: + File( ); + File( Header *header ); + File( std::string const &filename ); virtual ~File(); - /// Accessor to \ref Header - Header* GetHeader() { return HeaderInternal; } - - int ComputeDecompressedPixelDataSizeFromHeader(); + void Print(std::ostream &os = std::cout); - /// Accessor to \ref ImageDataSize - size_t GetImageDataSize(){ return ImageDataSize; }; + /// Accessor to \ref Header + Header *GetHeader() { return HeaderInternal; } - /// Accessor to \ref ImageDataSizeRaw - size_t GetImageDataSizeRaw(){ return ImageDataSizeRaw; }; + size_t GetImageDataSize(); + size_t GetImageDataRawSize(); - uint8_t* GetImageData(); - size_t GetImageDataIntoVector(void* destination, size_t maxSize); - uint8_t* GetImageDataRaw(); - void GetImageDataIntoVectorRaw(void* destination, size_t maxSize); + uint8_t *GetImageData(); + uint8_t *GetImageDataRaw(); + size_t GetImageDataIntoVector(void *destination, size_t maxSize); - // see also Header::SetImageDataSize ?!? - bool SetImageData (uint8_t* data, size_t expectedSize); + void SetImageData(uint8_t *data, size_t expectedSize); - /// \todo When the caller is aware we simply point to the data: - /// int SetImageDataNoCopy (void* Data, size_t ExpectedSize); + // User datas + void SetUserData(uint8_t *data, size_t expectedSize); + uint8_t* GetUserData(); + size_t GetUserDataSize(); + // RBG datas (from file + uint8_t* GetRGBData(); + size_t GetRGBDataSize(); + // RAW datas (from file + uint8_t* GetRawData(); + size_t GetRawDataSize(); // Write pixels of ONE image on hard drive // No test is made on processor "endianity" // The user must call his reader correctly - bool WriteRawData (std::string const& fileName); - bool WriteDcmImplVR(std::string const& fileName); - bool WriteDcmExplVR(std::string const& fileName); - bool WriteAcr (std::string const& fileName); - - // Don't look any longer for the code : - // It's in file gdcmParsePixels.cxx - bool ParsePixelData(); - - virtual bool SetEntryByNumber(std::string const& content, - uint16_t group, uint16_t element) - { - HeaderInternal->SetEntryByNumber(content,group,element); - return true; - } + bool WriteRawData (std::string const &fileName); + bool WriteDcmImplVR(std::string const &fileName); + bool WriteDcmExplVR(std::string const &fileName); + bool WriteAcr (std::string const &fileName); + bool Write (std::string const &fileName); + + bool SetEntry(std::string const &content, + uint16_t group, uint16_t element); + bool SetEntry(uint8_t *content, int lgth, + uint16_t group, uint16_t element); + bool ReplaceOrCreate(std::string const &content, + uint16_t group, uint16_t element); + bool ReplaceOrCreate(uint8_t *binArea, int lgth, + uint16_t group, uint16_t element); + uint8_t* GetLutRGBA(); - + + // Write mode + void SetWriteModeToRaw() { SetWriteMode(WMODE_RAW); }; + void SetWriteModeToRGB() { SetWriteMode(WMODE_RGB); }; + void SetWriteMode(FileMode mode) { WriteMode = mode; }; + FileMode GetWriteMode() { return WriteMode; }; + + // Write format + void SetWriteTypeToDcmImplVR() { SetWriteType(ImplicitVR); }; + void SetWriteTypeToDcmExplVR() { SetWriteType(ExplicitVR); }; + void SetWriteTypeToAcr() { SetWriteType(ACR); }; + void SetWriteTypeToAcrLibido() { SetWriteType(ACR_LIBIDO); }; + void SetWriteType(FileType format) { WriteType = format; }; + FileType GetWriteType() { return WriteType; }; + protected: - bool WriteBase(std::string const& fileName, FileType type); + bool CheckWriteIntegrity(); -private: - void Initialise(); + void SetWriteToRaw(); + void SetWriteToRGB(); + void RestoreWrite(); - // For JPEG 8 Bits, body in file gdcmJpeg.cxx - bool gdcm_write_JPEG_file (FILE* fp, void* image_buffer, - int image_width, int image_heigh, - int quality); + void SetWriteFileTypeToACR(); + void SetWriteFileTypeToExplicitVR(); + void SetWriteFileTypeToImplicitVR(); + void RestoreWriteFileType(); - // For JPEG 12 Bits, body in file gdcmJpeg12.cxx - bool gdcm_write_JPEG_file12 (FILE* fp, void* image_buffer, - int image_width, int image_height, - int quality); + void SetWriteToLibido(); + void SetWriteToNoLibido(); + void RestoreWriteOfLibido(); - void SaveInitialValues(); // will belong to the future PixelData class - void RestoreInitialValues(); // will belong to the future PixelData class - void DeleteInitialValues(); // will belong to the future PixelData class + ValEntry *CopyValEntry(uint16_t group,uint16_t element); + BinEntry *CopyBinEntry(uint16_t group,uint16_t element); private: -// members variables: + void Initialise(); + uint8_t *GetRaw(); + +// members variables: /// Header to use to load the file Header *HeaderInternal; @@ -113,79 +144,19 @@ private: /// the destructor is in charge of deletion. bool SelfHeader; - /// wether already parsed + /// Wether already parsed or not bool Parsed; - - /// FIXME - PixelConvert PixelConverter; -// -// --------------- Will be moved to a PixelData class -// - - /// \brief to hold the Pixels (when read) - uint8_t* Pixel_Data; // (was PixelData) - - /// \brief Size (in bytes) of required memory to hold the Gray Level pixels - /// represented in this file. This is used when the user DOESN'T want - /// the RGB pixels image when it's stored as a PALETTE COLOR image - size_t ImageDataSizeRaw; - - /// \brief Size (in bytes) of requited memory to hold the the pixels - /// of this image in it's RGB convertion either from: - /// - Plane R, Plane G, Plane B - /// - Grey Plane + Palette Color - /// - YBR Pixels (or from RGB Pixels, as well) - size_t ImageDataSize; - - /// \brief ==1 if GetImageDataRaw was used - /// ==0 if GetImageData was used - /// ==-1 if ImageData never read - int PixelRead; - - /// \brief length of the last allocated area devoided to receive Pixels - /// ( to allow us not to (free + new) if un necessary ) - size_t LastAllocatedPixelDataLength; - - // Initial values of some fields that can be modified during reading process - // if user asked to transform gray level + LUT image into RGB image - - /// \brief Samples Per Pixel (0x0028,0x0002), as found on disk - std::string InitialSpp; - /// \brief Photometric Interpretation (0x0028,0x0004), as found on disk - std::string InitialPhotInt; - /// \brief Planar Configuration (0x0028,0x0006), as found on disk - std::string InitialPlanConfig; - - // Initial values of some fields that can be modified during reading process - // if the image was a 'strange' ACR-NEMA - // (Bits Allocated=12, High Bit not equal to Bits stored +1) - /// \brief Bits Allocated (0x0028,0x0100), as found on disk - std::string InitialBitsAllocated; - /// \brief High Bit (0x0028,0x0102), as found on disk - std::string InitialHighBit; - - // some DocEntry that can be moved out of the H table during reading process - // if user asked to transform gray level + LUT image into RGB image - // We keep a pointer on them for a future use. - - /// \brief Red Palette Color Lookup Table Descriptor 0028 1101 as read - DocEntry* InitialRedLUTDescr; - /// \brief Green Palette Color Lookup Table Descriptor 0028 1102 as read - DocEntry* InitialGreenLUTDescr; - /// \brief Blue Palette Color Lookup Table Descriptor 0028 1103 as read - DocEntry* InitialBlueLUTDescr; - - /// \brief Red Palette Color Lookup Table Data 0028 1201 as read - DocEntry* InitialRedLUTData; - /// \brief Green Palette Color Lookup Table Data 0028 1202 as read - DocEntry* InitialGreenLUTData; - /// \brief Blue Palette Color Lookup Table Data 0028 1203 as read - DocEntry* InitialBlueLUTData; - -// -// --------------- end of future PixelData class -// + /// Utility pixel converter + PixelReadConvert *PixelReadConverter; + PixelWriteConvert *PixelWriteConverter; + + // Utility header archive + DocEntryArchive *Archive; + + // Write variables + FileMode WriteMode; + FileType WriteType; }; } // end namespace gdcm