X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src%2FgdcmFile.h;h=af9382efac99beb6e325683ae3bc0eb660075105;hb=0bbf3772212391cff69ed451c0a089279ee0c27c;hp=0cde71458e8cdcb3a5c3690849b99dd9f09d28c0;hpb=80f7a0ffbc39a8a7c47c2a8c6c9a272515d55d6f;p=gdcm.git diff --git a/src/gdcmFile.h b/src/gdcmFile.h index 0cde7145..af9382ef 100644 --- a/src/gdcmFile.h +++ b/src/gdcmFile.h @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: gdcmFile.h,v $ Language: C++ - Date: $Date: 2004/10/22 13:56:46 $ - Version: $Revision: 1.66 $ + Date: $Date: 2005/01/06 08:46:21 $ + Version: $Revision: 1.90 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -19,45 +19,63 @@ #ifndef GDCMFILE_H #define GDCMFILE_H -#include "gdcmCommon.h" -#include "gdcmHeader.h" -#include "gdcmPixelConvert.h" +#include +#include "gdcmBase.h" namespace gdcm { - +class Header; +class ValEntry; +class BinEntry; +class PixelReadConvert; +class PixelWriteConvert; +class DocEntryArchive; //----------------------------------------------------------------------------- /* * In addition to Dicom header exploration, this class is designed * for accessing the image/volume content. One can also use it to * write Dicom/ACR-NEMA/RAW files. */ -class GDCM_EXPORT File +class GDCM_EXPORT File : public Base { public: + enum FileMode + { + WMODE_RAW, + WMODE_RGB + }; + +public: + File( ); File( Header* header ); File( std::string const& filename ); virtual ~File(); + void Print(std::ostream &os = std::cout); + /// Accessor to \ref Header Header* GetHeader() { return HeaderInternal; } - /// Accessor to \ref ImageDataSize - size_t GetImageDataSize(){ return ImageDataSize; }; - - /// Accessor to \ref ImageDataSizeRaw - size_t GetImageDataSizeRaw(){ return ImageDataSizeRaw; }; - - /// Accessor to \ref PixelConverter - PixelConvert* GetPixelConverter(){ return PixelConverter; }; + size_t GetImageDataSize(); + size_t GetImageDataRawSize(); uint8_t* GetImageData(); - size_t GetImageDataIntoVector(void* destination, size_t maxSize); uint8_t* GetImageDataRaw(); + size_t GetImageDataIntoVector(void* destination, size_t maxSize); + + void SetImageData(uint8_t* data, size_t expectedSize); - // see also Header::SetImageDataSize ?!? - bool SetImageData (uint8_t* data, size_t expectedSize); + // User datas + void SetUserData(uint8_t* data, size_t expectedSize); + uint8_t* GetUserData(); + size_t GetUserDataSize(); + // RBG datas (from file + uint8_t* GetRGBData(); + size_t GetRGBDataSize(); + // RAW datas (from file + uint8_t* GetRawData(); + size_t GetRawDataSize(); // Write pixels of ONE image on hard drive // No test is made on processor "endianity" @@ -66,30 +84,58 @@ public: bool WriteDcmImplVR(std::string const& fileName); bool WriteDcmExplVR(std::string const& fileName); bool WriteAcr (std::string const& fileName); + bool Write(std::string const& fileName); + + bool SetEntryByNumber(std::string const& content, + uint16_t group, uint16_t element); + bool SetEntryByNumber(uint8_t* content, int lgth, + uint16_t group, uint16_t element); + bool ReplaceOrCreateByNumber(std::string const& content, + uint16_t group, uint16_t element); + bool ReplaceOrCreateByNumber(uint8_t* binArea, int lgth, + uint16_t group, uint16_t element); - virtual bool SetEntryByNumber(std::string const& content, - uint16_t group, uint16_t element) - { - HeaderInternal->SetEntryByNumber(content,group,element); - return true; - } uint8_t* GetLutRGBA(); - + + // Write mode + void SetWriteModeToRaw() { SetWriteMode(WMODE_RAW); }; + void SetWriteModeToRGB() { SetWriteMode(WMODE_RGB); }; + void SetWriteMode(FileMode mode) { WriteMode = mode; }; + FileMode GetWriteMode() { return WriteMode; }; + + // Write format + void SetWriteTypeToDcmImplVR() { SetWriteType(ImplicitVR); }; + void SetWriteTypeToDcmExplVR() { SetWriteType(ExplicitVR); }; + void SetWriteTypeToAcr() { SetWriteType(ACR); }; + void SetWriteTypeToAcrLibido() { SetWriteType(ACR_LIBIDO); }; + void SetWriteType(FileType format) { WriteType = format; }; + FileType GetWriteType() { return WriteType; }; + protected: - bool WriteBase(std::string const& fileName, FileType type); + bool CheckWriteIntegrity(); + + void SetWriteToRaw(); + void SetWriteToRGB(); + void RestoreWrite(); + + void SetWriteFileTypeToACR(); + void SetWriteFileTypeToExplicitVR(); + void SetWriteFileTypeToImplicitVR(); + void RestoreWriteFileType(); + + void SetWriteToLibido(); + void SetWriteToNoLibido(); + void RestoreWriteOfLibido(); + + ValEntry* CopyValEntry(uint16_t group,uint16_t element); + BinEntry* CopyBinEntry(uint16_t group,uint16_t element); private: void Initialise(); - void SaveInitialValues(); // will belong to the future PixelData class - void RestoreInitialValues(); // will belong to the future PixelData class - void DeleteInitialValues(); // will belong to the future PixelData class - uint8_t* GetDecompressed(); - int ComputeDecompressedPixelDataSizeFromHeader(); + uint8_t* GetRaw(); -private: // members variables: - /// Header to use to load the file Header *HeaderInternal; @@ -100,78 +146,17 @@ private: /// Wether already parsed or not bool Parsed; - - /// Utility pixel converter - PixelConvert* PixelConverter; -/// FIXME -// --------------- Will be moved to a PixelData class -// + /// Utility pixel converter + PixelReadConvert* PixelReadConverter; + PixelWriteConvert* PixelWriteConverter; - /// \brief to hold the Pixels (when read) - uint8_t* Pixel_Data; // (was PixelData) - - /// \brief Size (in bytes) of required memory to hold the Gray Level pixels - /// represented in this file. This is used when the user DOESN'T want - /// the RGB pixels image when it's stored as a PALETTE COLOR image - size_t ImageDataSizeRaw; - - /// \brief Size (in bytes) of requited memory to hold the the pixels - /// of this image in it's RGB convertion either from: - /// - Plane R, Plane G, Plane B - /// - Grey Plane + Palette Color - /// - YBR Pixels (or from RGB Pixels, as well) - size_t ImageDataSize; - - /// \brief ==1 if GetImageDataRaw was used - /// ==0 if GetImageData was used - /// ==-1 if ImageData never read - int PixelRead; - - /// \brief length of the last allocated area devoided to receive Pixels - /// ( to allow us not to (free + new) if un necessary ) - size_t LastAllocatedPixelDataLength; - - // Initial values of some fields that can be modified during reading process - // if user asked to transform gray level + LUT image into RGB image - - /// \brief Samples Per Pixel (0x0028,0x0002), as found on disk - std::string InitialSpp; - /// \brief Photometric Interpretation (0x0028,0x0004), as found on disk - std::string InitialPhotInt; - /// \brief Planar Configuration (0x0028,0x0006), as found on disk - std::string InitialPlanConfig; - - // Initial values of some fields that can be modified during reading process - // if the image was a 'strange' ACR-NEMA - // (Bits Allocated=12, High Bit not equal to Bits stored +1) - /// \brief Bits Allocated (0x0028,0x0100), as found on disk - std::string InitialBitsAllocated; - /// \brief High Bit (0x0028,0x0102), as found on disk - std::string InitialHighBit; - - // some DocEntry that can be moved out of the H table during reading process - // if user asked to transform gray level + LUT image into RGB image - // We keep a pointer on them for a future use. - - /// \brief Red Palette Color Lookup Table Descriptor 0028 1101 as read - DocEntry* InitialRedLUTDescr; - /// \brief Green Palette Color Lookup Table Descriptor 0028 1102 as read - DocEntry* InitialGreenLUTDescr; - /// \brief Blue Palette Color Lookup Table Descriptor 0028 1103 as read - DocEntry* InitialBlueLUTDescr; - - /// \brief Red Palette Color Lookup Table Data 0028 1201 as read - DocEntry* InitialRedLUTData; - /// \brief Green Palette Color Lookup Table Data 0028 1202 as read - DocEntry* InitialGreenLUTData; - /// \brief Blue Palette Color Lookup Table Data 0028 1203 as read - DocEntry* InitialBlueLUTData; - -// -// --------------- end of future PixelData class -// + // Utility header archive + DocEntryArchive *Archive; + // Write variables + FileMode WriteMode; + FileType WriteType; }; } // end namespace gdcm