X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src%2FgdcmFile.h;h=c824a342cbebd8c089af1af819f1c29659885298;hb=00b6e0ddcbdbd41252e03732783f65efe5f52526;hp=0336584f88c4797e705bc896c7c0683e72bf0a06;hpb=b6e445adae1963909952eeef10ea7c1d2e0d3e0d;p=gdcm.git diff --git a/src/gdcmFile.h b/src/gdcmFile.h index 0336584f..c824a342 100644 --- a/src/gdcmFile.h +++ b/src/gdcmFile.h @@ -1,4 +1,20 @@ -// gdcmFile.h +/*========================================================================= + + Program: gdcm + Module: $RCSfile: gdcmFile.h,v $ + Language: C++ + Date: $Date: 2004/06/26 04:09:33 $ + Version: $Revision: 1.36 $ + + Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de + l'Image). All rights reserved. See Doc/License.txt or + http://www.creatis.insa-lyon.fr/Public/Gdcm/License.htm for details. + + This software is distributed WITHOUT ANY WARRANTY; without even + the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR + PURPOSE. See the above copyright notices for more information. + +=========================================================================*/ #ifndef GDCMFILE_H #define GDCMFILE_H @@ -6,76 +22,125 @@ #include "gdcmCommon.h" #include "gdcmHeader.h" -//////////////////////////////////////////////////////////////////////////// -// In addition to Dicom header exploration, this class is designed -// for accessing the image/volume content. One can also use it to -// write Dicom files. - -class GDCM_EXPORT gdcmFile: public gdcmHeader +//----------------------------------------------------------------------------- +/* + * In addition to Dicom header exploration, this class is designed + * for accessing the image/volume content. One can also use it to + * write Dicom/ACR-NEMA/RAW files. + */ +class GDCM_EXPORT gdcmFile { -private: - void* PixelData; - size_t lgrTotale; - int Parsed; // weather already parsed - std::string OrigFileName; // To avoid file overwrite - void SwapZone(void* im, int swap, int lgr, int nb); - - bool ReadPixelData(void * destination); - - int gdcm_read_JPEG_file (void * image_buffer); // For JPEG 8 Bits - int gdcm_read_JPEG_file12 (void * image_buffer); // For JPEG 12 Bits - int gdcm_read_JPEG2000_file (void * image_buffer); // For JPEG 2000 (TODO) +public: + gdcmFile(gdcmHeader *header); + gdcmFile(std::string const & filename, + bool exception_on_error = false, + bool enable_sequences = false, + bool skip_shadow = false); + + virtual ~gdcmFile(); -// For Run Length Encoding (TOCHECK) - int gdcm_read_RLE_file (void * image_buffer); + /// \brief returns the gdcmHeader *Header + inline gdcmHeader *GetHeader() { return Header; } - -protected: - int WriteBase(std::string FileName, FileType type); -public: - gdcmFile(std::string & filename); - gdcmFile(const char * filename); - - // For promotion (performs a deepcopy of pointed header object) - // TODO Swig gdcmFile(gdcmHeader* header); - // TODO Swig ~gdcmFile(); - - // On writing purposes. When instance was created through - // gdcmFile(std::string filename) then the filename argument MUST be + // For promotion (performs a deepcopy of pointed header object) + // TODO Swig gdcmFile(gdcmHeader* header); + // TODO Swig ~gdcmFile(); + + // On writing purposes. When instance was created through + // gdcmFile(std::string filename) then the filename argument MUST be // different from the constructor's one (no overwriting allowed). - // TODO Swig int SetFileName(std::string filename); + // TODO Swig int SetFileName(std::string filename); - void SetPixelDataSizeFromHeader(void); + void SetPixelDataSizeFromHeader(); size_t GetImageDataSize(); + size_t GetImageDataSizeRaw(); + void * GetImageData(); - size_t GetImageDataIntoVector(void* destination, size_t MaxSize ); - + size_t GetImageDataIntoVector(void* destination, size_t MaxSize); + void * GetImageDataRaw(); + size_t GetImageDataIntoVectorRaw(void* destination, size_t MaxSize); + // Allocates ExpectedSize bytes of memory at this->Data and copies the // pointed data to it. Copying the image might look useless but // the caller might destroy it's image (without knowing it: think // of a complicated interface where display is done with a library // e.g. VTK) before calling the Write - int SetImageData (void * Data, size_t ExpectedSize); + + // voir gdcmHeader::SetImageDataSize ?!? + bool SetImageData (void * Data, size_t ExpectedSize); // When the caller is aware we simply point to the data: // TODO int SetImageDataNoCopy (void * Data, size_t ExpectedSize); - void SetImageDataSize (size_t ExpectedSize); - - // Push to disk. - // A NE PAS OUBLIER : que fait-on en cas de Transfert Syntax (dans l'entete) - // incohérente avec l'ordre des octets en mémoire ? - // TODO Swig int Write(); - - // Ecrit sur disque les pixels d'UNE image - // Aucun test n'est fait sur l'"Endiannerie" du processeur. - // Ca sera à l'utilisateur d'appeler son Reader correctement - - int WriteRawData (std::string fileName); - int WriteDcmImplVR(std::string fileName); - int WriteDcmImplVR(const char * fileName); - int WriteDcmExplVR(std::string fileName); - int WriteAcr (std::string fileName); + + // Push to disk. + // TODO Swig int Write(); + + // Write pixels of ONE image on hard drive + // No test is made on processor "endianity" + // The user must call his reader correctly + bool WriteRawData (std::string const & fileName); + bool WriteDcmImplVR(std::string const & fileName); + bool WriteDcmExplVR(std::string const & fileName); + bool WriteAcr (std::string const & fileName); + + // Don't look any longer for the code : + // It's in file gdcmParsePixels.cxx + bool ParsePixelData(); + + inline virtual bool SetEntryByNumber(std::string const & content, + guint16 group, guint16 element) + { + GetHeader()->SetEntryByNumber(content,group,element); + return true; //default behavior ? + } + +protected: + bool WriteBase(std::string const & FileName, FileType type); + +private: + void SwapZone(void* im, int swap, int lgr, int nb); + + bool ReadPixelData(void * destination); - bool ParsePixelData(void); + // For JPEG 8 Bits, body in file gdcmJpeg.cxx + bool gdcm_read_JPEG_file (FILE *fp,void * image_buffer); + static int gdcm_read_RLE_fragment(char **areaToRead, long lengthToDecode, + long uncompressedSegmentSize,FILE *fp); + // For JPEG 12 Bits, body in file gdcmJpeg12.cxx + bool gdcm_read_JPEG_file12 (FILE *fp,void * image_buffer); + // For JPEG 2000, body in file gdcmJpeg2000.cxx + bool gdcm_read_JPEG2000_file (FILE *fp,void * image_buffer); + + // For Run Length Encoding (TOCHECK) + bool gdcm_read_RLE_file (FILE *fp,void * image_buffer); + +// Variables + + /// \brief Header to use to load the file + gdcmHeader *Header; + + /// \brief Whether the underlying \ref gdcmHeader was loaded by + /// the constructor or passed to the constructor. When false + /// the destructor is in charge of deletion. + bool SelfHeader; + + /// \brief to hold the Pixels (when read) + void* PixelData; + + /// \brief Area length to receive the pixels + size_t ImageDataSizeRaw; + + /// \brief Area length to receive the RGB pixels + /// from Grey Plane + Palette Color + size_t ImageDataSize; + + /// \brief ==1 if GetImageDataRaw was used + /// ==0 if GetImageData was used + /// ==-1 if ImageData never read + int PixelRead; + + /// wether already parsed + int Parsed; }; +//----------------------------------------------------------------------------- #endif