X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src%2FgdcmFile.h;h=e978703b6060caa3b91d6a3895d20f3fbce398d9;hb=c5618e6b8276e1b21bbea354fe8bcba3c78eb4bd;hp=395f7ed45b6e415164303fd9c0595f721919dfdd;hpb=15d7b1b38f5ddb59d395e0e4e3f9b0250eb90eec;p=gdcm.git diff --git a/src/gdcmFile.h b/src/gdcmFile.h index 395f7ed4..e978703b 100644 --- a/src/gdcmFile.h +++ b/src/gdcmFile.h @@ -1,47 +1,31 @@ // gdcmFile.h - +//----------------------------------------------------------------------------- #ifndef GDCMFILE_H #define GDCMFILE_H #include "gdcmCommon.h" #include "gdcmHeader.h" +//----------------------------------------------------------------------------- /* * In addition to Dicom header exploration, this class is designed * for accessing the image/volume content. One can also use it to - * write Dicom files. + * write Dicom/ACR-NEMA/RAW files. */ class GDCM_EXPORT gdcmFile { -private: - gdcmHeader *Header; // Header to use to load the file - bool SelfHeader; - - void* PixelData; - size_t lgrTotaleRaw; // Area length to receive the pixels - size_t lgrTotale; // Area length to receive the RGB pixels - // from Grey Plane + Palette Color - - int Parsed; // weather already parsed - std::string OrigFileName; // To avoid file overwrite - void SwapZone(void* im, int swap, int lgr, int nb); - - bool ReadPixelData(void * destination); - - bool gdcm_read_JPEG_file (FILE *fp,void * image_buffer); // For JPEG 8 Bits - bool gdcm_read_JPEG_file12 (FILE *fp,void * image_buffer); // For JPEG 12 Bits - bool gdcm_read_JPEG2000_file (FILE *fp,void * image_buffer); // For JPEG 2000 (TODO) - -// For Run Length Encoding (TOCHECK) - bool gdcm_read_RLE_file (FILE *fp,void * image_buffer); - -protected: - int WriteBase(std::string FileName, FileType type); - public: gdcmFile(gdcmHeader *header); - gdcmFile(std::string & filename); - gdcmFile(const char * filename); + gdcmFile(std::string & filename, + bool exception_on_error = false, + bool enable_sequences = false, + bool skip_shadow = false); + + gdcmFile(const char * filename, + bool exception_on_error = false, + bool enable_sequences = false, + bool skip_shadow = false); + virtual ~gdcmFile(void); gdcmHeader *GetHeader(void); @@ -52,12 +36,13 @@ public: // On writing purposes. When instance was created through // gdcmFile(std::string filename) then the filename argument MUST be - // different from the constructor's one (no overwriting allowed). + // different from the constructor's one (no overwriting allowed). // TODO Swig int SetFileName(std::string filename); void SetPixelDataSizeFromHeader(void); size_t GetImageDataSize(); size_t GetImageDataSizeRaw(); + void * GetImageData(); size_t GetImageDataIntoVector(void* destination, size_t MaxSize); void * GetImageDataRaw(); @@ -68,7 +53,9 @@ public: // the caller might destroy it's image (without knowing it: think // of a complicated interface where display is done with a library // e.g. VTK) before calling the Write - int SetImageData (void * Data, size_t ExpectedSize); + + // voir gdcmHeader::SetImageDataSize ?!? + bool SetImageData (void * Data, size_t ExpectedSize); // When the caller is aware we simply point to the data: // TODO int SetImageDataNoCopy (void * Data, size_t ExpectedSize); @@ -77,16 +64,63 @@ public: // incohérente avec l'ordre des octets en mémoire ? // TODO Swig int Write(); - // Ecrit sur disque les pixels d'UNE image - // Aucun test n'est fait sur l'"Endiannerie" du processeur. - // Ca sera à l'utilisateur d'appeler son Reader correctement - int WriteRawData (std::string fileName); - int WriteDcmImplVR(std::string fileName); - int WriteDcmImplVR(const char * fileName); - int WriteDcmExplVR(std::string fileName); - int WriteAcr (std::string fileName); - + // Write pixels of ONE image on hard drive + // No test is made on processor "endianity" + // The user must call his reader correctly + bool WriteRawData (std::string fileName); + bool WriteDcmImplVR(std::string fileName); + bool WriteDcmImplVR(const char * fileName); + bool WriteDcmExplVR(std::string fileName); + bool WriteAcr (std::string fileName); + + // Body in file gdcmParse.cxx bool ParsePixelData(void); + +protected: + bool WriteBase(std::string FileName, FileType type); + +private: + void SwapZone(void* im, int swap, int lgr, int nb); + + bool ReadPixelData(void * destination); + + // For JPEG 8 Bits, body in file gdcmJpeg.cxx + bool gdcm_read_JPEG_file (FILE *fp,void * image_buffer); + static int gdcm_read_RLE_fragment(char **areaToRead, long lengthToDecode, + long uncompressedSegmentSize,FILE *fp); + // For JPEG 12 Bits, body in file gdcmJpeg12.cxx + bool gdcm_read_JPEG_file12 (FILE *fp,void * image_buffer); + // For JPEG 2000, body in file gdcmJpeg2000.cxx + bool gdcm_read_JPEG2000_file (FILE *fp,void * image_buffer); + + // For Run Length Encoding (TOCHECK) + bool gdcm_read_RLE_file (FILE *fp,void * image_buffer); + +// Variables + /// Header to use to load the file + gdcmHeader *Header; + bool SelfHeader; + + void* PixelData; + + /// Area length to receive the pixels + size_t lgrTotaleRaw; + + /// Area length to receive the RGB pixels + /// from Grey Plane + Palette Color + size_t lgrTotale; + + /// ==1 if GetImageDataRaw was used + /// ==0 if GetImageData was used + /// ==-1 if ImageData never read + int PixelRead; + + /// weather already parsed + int Parsed; + + /// To avoid file overwrite + std::string OrigFileName; }; +//----------------------------------------------------------------------------- #endif