X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src%2FgdcmHeader.cxx;h=99d6360664b1b9ce94dec513e40cb7300b801a0d;hb=8afcac16f1406492a512a14845b6234bc9fee5ed;hp=2a4cef16d57701393d01983d70a36c88a3230b4e;hpb=4972f09e5e59026101c4e808423bc35906f5f549;p=gdcm.git diff --git a/src/gdcmHeader.cxx b/src/gdcmHeader.cxx index 2a4cef16..99d63606 100644 --- a/src/gdcmHeader.cxx +++ b/src/gdcmHeader.cxx @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: gdcmHeader.cxx,v $ Language: C++ - Date: $Date: 2004/11/17 10:23:30 $ - Version: $Revision: 1.203 $ + Date: $Date: 2004/12/02 15:14:18 $ + Version: $Revision: 1.210 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -22,7 +22,7 @@ #include "gdcmDebug.h" #include "gdcmTS.h" #include "gdcmValEntry.h" -#include +#include //sscanf #include @@ -48,7 +48,7 @@ Header::Header( std::string const & filename ): // Note: this IS the right place for the code // Image Location - std::string imgLocation = GetEntryByNumber(0x0028, 0x0200); + const std::string &imgLocation = GetEntryByNumber(0x0028, 0x0200); if ( imgLocation == GDCM_UNFOUND ) { // default value @@ -102,8 +102,16 @@ Header::~Header () * @param filetype Type of the File to be written * (ACR-NEMA, ExplicitVR, ImplicitVR) */ -void Header::Write(std::ofstream* fp,FileType filetype) +bool Header::Write(std::string fileName,FileType filetype) { + std::ofstream* fp = new std::ofstream(fileName.c_str(), + std::ios::out | std::ios::binary); + if (fp == NULL) + { + dbg.Verbose(2, "Failed to open (write) File: " , fileName.c_str()); + return false; + } + // Bits Allocated if ( GetEntryByNumber(0x0028,0x0100) == "12") { @@ -163,7 +171,12 @@ void Header::Write(std::ofstream* fp,FileType filetype) RemoveEntryNoDestroy(e); } } - Document::Write(fp,filetype); + Document::WriteContent(fp,filetype); + + fp->close(); + delete fp; + + return true; } //----------------------------------------------------------------------------- @@ -188,7 +201,7 @@ bool Header::IsReadable() return false; } - std::string res = GetEntryByNumber(0x0028, 0x0005); + const std::string &res = GetEntryByNumber(0x0028, 0x0005); if ( res != GDCM_UNFOUND && atoi(res.c_str()) > 4 ) { return false; // Image Dimensions @@ -220,8 +233,7 @@ bool Header::IsReadable() */ int Header::GetXSize() { - std::string strSize; - strSize = GetEntryByNumber(0x0028,0x0011); + const std::string &strSize = GetEntryByNumber(0x0028,0x0011); if ( strSize == GDCM_UNFOUND ) { return 0; @@ -238,7 +250,7 @@ int Header::GetXSize() */ int Header::GetYSize() { - std::string strSize = GetEntryByNumber(0x0028,0x0010); + const std::string &strSize = GetEntryByNumber(0x0028,0x0010); if ( strSize != GDCM_UNFOUND ) { return atoi( strSize.c_str() ); @@ -265,17 +277,17 @@ int Header::GetZSize() { // Both DicomV3 and ACR/Nema consider the "Number of Frames" // as the third dimension. - std::string strSize = GetEntryByNumber(0x0028,0x0008); + const std::string &strSize = GetEntryByNumber(0x0028,0x0008); if ( strSize != GDCM_UNFOUND ) { return atoi( strSize.c_str() ); } // We then consider the "Planes" entry as the third dimension - strSize = GetEntryByNumber(0x0028,0x0012); - if ( strSize != GDCM_UNFOUND ) + const std::string &strSize2 = GetEntryByNumber(0x0028,0x0012); + if ( strSize2 != GDCM_UNFOUND ) { - return atoi( strSize.c_str() ); + return atoi( strSize2.c_str() ); } return 1; @@ -289,7 +301,7 @@ int Header::GetZSize() float Header::GetXSpacing() { float xspacing, yspacing; - std::string strSpacing = GetEntryByNumber(0x0028,0x0030); + const std::string &strSpacing = GetEntryByNumber(0x0028,0x0030); if ( strSpacing == GDCM_UNFOUND ) { @@ -1164,27 +1176,6 @@ std::string Header::GetTransfertSyntaxName() return tsName; } -/** - * \brief Sets the Pixel Area size in the Header - * --> not-for-rats function - * @param ImageDataSize new Pixel Area Size - * warning : nothing else is checked - */ -void Header::SetImageDataSize(size_t ImageDataSize) -{ - ///FIXME I don't understand this code why do we set two times 'car' ? - std::string car = Util::Format("%d", ImageDataSize); - - DocEntry *a = GetDocEntryByNumber(GrPixel, NumPixel); - a->SetLength(ImageDataSize); - - ImageDataSize += 8; - car = Util::Format("%d", ImageDataSize); - car = Util::DicomString( car.c_str() ); - - SetEntryByNumber(car, GrPixel, NumPixel); -} - //----------------------------------------------------------------------------- // Protected @@ -1318,57 +1309,57 @@ void Header::InitializeDefaultHeader() uint16_t elem; } DICOM_DEFAULT_VALUE; - const char *date = Util::GetCurrentDate().c_str(); - const char *time = Util::GetCurrentTime().c_str(); - const char *uid = Util::CreateUniqueUID().c_str(); + std::string date = Util::GetCurrentDate(); + std::string time = Util::GetCurrentTime(); + std::string uid = Util::CreateUniqueUID(); static DICOM_DEFAULT_VALUE defaultvalue[] = { "76", 0x0002, 0x0000, // MetaElementGroup Length // FIXME: how to recompute ? "1.2.840.10008.5.1.4.1.1.2", 0x0002, 0x0002, // MediaStorageSOPInstanceUID (CT Image Storage) - uid, 0x0002, 0x0012, // META Implementation Class UID - "ISO_IR 100", 0x0008, 0x0005, // Specific Character Set + uid.c_str(), 0x0002, 0x0012, // META Implementation Class UID + "ISO_IR 100",0x0008, 0x0005, // Specific Character Set "DERIVED\\SECONDARY\\OTHER\\GDCM", 0x0008, 0x0008, // Image Type "1.2.840.10008.5.1.4.1.1.2", 0x0008, 0x0016, // SOP Class UID - "", 0x0008, 0x0050, // Accession Number - "GDCM", 0x0008, 0x0070, // Manufacturer - "GDCM", 0x0008, 0x0080, // Institution Name + "", 0x0008, 0x0050, // Accession Number + "GDCM", 0x0008, 0x0070, // Manufacturer + "GDCM", 0x0008, 0x0080, // Institution Name "http://www-creatis.insa-lyon.fr/Public/Gdcm/", 0x0008, 0x0081, // Institution Address - "", 0x0008, 0x0090, // Refering Physician Name - "", 0x0008, 0x1030, // Study Description - "", 0x0008, 0x1050, // Performing Physician's Name - "", 0x0008, 0x1060, // Name of Physician(s) Reading Study - "", 0x0010, 0x0040, // Patient's Sex - uid, 0x0020, 0x000d, // StudyInstanceUID - uid, 0x0020, 0x000e, // SeriesInstanceUID - "", 0x0020, 0x0011, // AcquisitionNumber + "", 0x0008, 0x0090, // Refering Physician Name + "", 0x0008, 0x1030, // Study Description + "", 0x0008, 0x1050, // Performing Physician's Name + "", 0x0008, 0x1060, // Name of Physician(s) Reading Study + "", 0x0010, 0x0040, // Patient's Sex + uid.c_str(), 0x0020, 0x000d, // StudyInstanceUID + uid.c_str(), 0x0020, 0x000e, // SeriesInstanceUID + "", 0x0020, 0x0011, // AcquisitionNumber "1\\0\\0\\0\\1\\0", 0x0020, 0x0037, // Image Orientation Patient - "1", 0x0028, 0x0002, // Samples per pixel 1 or 3 - "MONOCHROME2", 0x0028, 0x0004, // photochromatic interpretation - -// Date and time - - date, 0x0008, 0x0012, // Instance Creation Date - time, 0x0008, 0x0013, // Instance Creation Time - date, 0x0008, 0x0020, // Study Date - date, 0x0008, 0x0022, // Acquisition Date - date, 0x0008, 0x0023, // Content Date - time, 0x0008, 0x0030, // Study Time - "CT", 0x0008, 0x0060, // Modality - "GDCM", 0x0010, 0x0010, // Patient's Name - "GDCMID", 0x0010, 0x0020, // Patient ID - "1", 0x0020, 0x0010, // StudyID - "1", 0x0020, 0x0011, // SeriesNumber - "1.0", 0x0018, 0x0050, // slice Thickness - "1.0", 0x0018, 0x0088, // space between slices - "1.0\\1.0", 0x0028, 0x0030, // pixelSpacing - "64", 0x0028, 0x0010, // nbRows - "64", 0x0028, 0x0011, // nbCols - "16", 0x0028, 0x0100, // BitsAllocated 8 or 16 - "12", 0x0028, 0x0101, // BitsStored 8 or 12 - "11", 0x0028, 0x0102, // HighBit 7 or 11 - "0", 0x0028, 0x0103, // Pixel Representation 0(unsigned) or 1(signed) - "1000.0", 0x0028, 0x1051, // Window Width - "500.0", 0x0028, 0x1050, // Window Center + "1", 0x0028, 0x0002, // Samples per pixel 1 or 3 + "MONOCHROME2",0x0028, 0x0004, // photochromatic interpretation + +// Date and timeG + + date.c_str(), 0x0008, 0x0012, // Instance Creation Date + time.c_str(), 0x0008, 0x0013, // Instance Creation Time + date.c_str(), 0x0008, 0x0020, // Study Date + date.c_str(), 0x0008, 0x0022, // Acquisition Date + date.c_str(), 0x0008, 0x0023, // Content Date + time.c_str(), 0x0008, 0x0030, // Study Time + "CT", 0x0008, 0x0060, // Modality + "GDCM", 0x0010, 0x0010, // Patient's Name + "GDCMID", 0x0010, 0x0020, // Patient ID + "1", 0x0020, 0x0010, // StudyID + "1", 0x0020, 0x0011, // SeriesNumber + "1.0", 0x0018, 0x0050, // slice Thickness + "1.0", 0x0018, 0x0088, // space between slices + "1.0\\1.0", 0x0028, 0x0030, // pixelSpacing + "64", 0x0028, 0x0010, // nbRows + "64", 0x0028, 0x0011, // nbCols + "16", 0x0028, 0x0100, // BitsAllocated 8 or 16 + "12", 0x0028, 0x0101, // BitsStored 8 or 12 + "11", 0x0028, 0x0102, // HighBit 7 or 11 + "0", 0x0028, 0x0103, // Pixel Representation 0(unsigned) or 1(signed) + "1000.0", 0x0028, 0x1051, // Window Width + "500.0", 0x0028, 0x1050, // Window Center 0, 0, 0 };