X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src2%2FcreaImageIODicomImageReader.cpp;h=8a5863bf7413ad5fda0ad63521301573b53e29b5;hb=da2cb2feea7bdf425151ea3fd71abf9b8b72c366;hp=35075fb475510623e856e2c4e351dff8a3dd960d;hpb=96ca5a0d7b7ccd6b4291160c19afd48e3207db2a;p=creaImageIO.git diff --git a/src2/creaImageIODicomImageReader.cpp b/src2/creaImageIODicomImageReader.cpp index 35075fb..8a5863b 100644 --- a/src2/creaImageIODicomImageReader.cpp +++ b/src2/creaImageIODicomImageReader.cpp @@ -1,5 +1,5 @@ #include -#include + #include #include #include "boost/filesystem/path.hpp" @@ -28,8 +28,7 @@ namespace creaImageIO //===================================================================== bool DicomImageReader::CanRead(const std::string& filename) { - - GDCM_NAME_SPACE::Document*doc; + GDCM_NAME_SPACE::Document*doc; GDCM_NAME_SPACE::File* file = GDCM_NAME_SPACE::File::New(); file->SetLoadMode( GDCM_NAME_SPACE::LD_ALL); file->SetFileName(filename.c_str()); @@ -48,7 +47,6 @@ namespace creaImageIO //===================================================================== vtkImageData* DicomImageReader::ReadImage(const std::string& filename) { - vtkImageData* im = 0; try { @@ -64,7 +62,7 @@ namespace creaImageIO } return im; } - + //===================================================================== void DicomImageReader::PushBackExtensions(std::vector& v) { @@ -76,43 +74,45 @@ namespace creaImageIO //======================================================================== std::string irclean(const std::string& str) { - if (str == "GDCM::Unfound") - { - return ""; - } - if (str[str.size()-1]==' ') - { - return str.substr(0,str.size()-1); - } - if (str[str.size()-1]==0) - { - return str.substr(0,str.size()-1); - } + if(str.size() > 0) + { + if (str == "GDCM::Unfound") + { + return ""; + } + if (str[str.size()-1]==' ') + { + return str.substr(0,str.size()-1); + } + if (str[str.size()-1]==0) + { + return str.substr(0,str.size()-1); + } + } return str; } //======================================================================== - + //===================================================================== void DicomImageReader::ReadAttributes(const std::string& filename, std::map& attr) { - GimmickMessage(2,"Reading attributes from DICOM file '" <SetLoadMode( GDCM_NAME_SPACE::LD_ALL); + //GDCM_NAME_SPACE::File* file = GDCM_NAME_SPACE::File::New(); + boost::shared_ptr file(GDCM_NAME_SPACE::File::New(), DicomImageReader::deleter()); + + GDCM_NAME_SPACE::Document *doc= GDCM_NAME_SPACE::File::New(); + doc->SetLoadMode( GDCM_NAME_SPACE::LD_ALL); doc->SetFileName(filename.c_str()); doc->Load(); file->SetLoadMode( GDCM_NAME_SPACE::LD_ALL); file->SetFileName(filename.c_str()); file->Load(); - if (file->IsReadable() ||((GDCM_NAME_SPACE::Document*) file)->IsReadable()) + if (file->IsReadable())// ||((GDCM_NAME_SPACE::Document*) file)->IsReadable()) { - std::map::iterator i; for (i=attr.begin();i!=attr.end();++i) { @@ -134,20 +134,20 @@ namespace creaImageIO } else { - uint16_t gr; uint16_t el; + uint16_t gr; + tree::AttributeDescriptor::GetDicomGroupElementFromKey(i->first,gr,el); if ( ( gr!=0 ) && ( el!=0 ) ) { - std::string val = file->GetEntryString(gr,el); + std::string val = file->GetEntryString(gr,el); i->second = irclean(val); } } } } - file->Delete(); } - + //===================================================================== } // namespace creaImageIO