X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src2%2FcreaImageIODicomImageReader.cpp;h=9390d1704a55acc790762864ef78eb34b4bcdcbe;hb=a00e6172593c713640aaa9bf1e61db6200231a0f;hp=96d56724d04446da73144a5af94445602c1c06d2;hpb=a67d921cdc10d438852b48c2985f14d91320e016;p=creaImageIO.git diff --git a/src2/creaImageIODicomImageReader.cpp b/src2/creaImageIODicomImageReader.cpp index 96d5672..9390d17 100644 --- a/src2/creaImageIODicomImageReader.cpp +++ b/src2/creaImageIODicomImageReader.cpp @@ -1,11 +1,12 @@ #include -#include + #include #include #include "boost/filesystem/path.hpp" #include #include +#include #ifdef _DEBUG #define new DEBUG_NEW #endif @@ -30,8 +31,7 @@ namespace creaImageIO //===================================================================== bool DicomImageReader::CanRead(const std::string& filename) { - - GDCM_NAME_SPACE::Document*doc; + GDCM_NAME_SPACE::Document*doc; GDCM_NAME_SPACE::File* file = GDCM_NAME_SPACE::File::New(); file->SetLoadMode( GDCM_NAME_SPACE::LD_ALL); file->SetFileName(filename.c_str()); @@ -50,7 +50,6 @@ namespace creaImageIO //===================================================================== vtkImageData* DicomImageReader::ReadImage(const std::string& filename) { - vtkImageData* im = 0; try { @@ -66,7 +65,7 @@ namespace creaImageIO } return im; } - + //===================================================================== void DicomImageReader::PushBackExtensions(std::vector& v) { @@ -78,43 +77,45 @@ namespace creaImageIO //======================================================================== std::string irclean(const std::string& str) { - if (str == "GDCM::Unfound") - { - return ""; - } - if (str[str.size()-1]==' ') - { - return str.substr(0,str.size()-1); - } - if (str[str.size()-1]==0) - { - return str.substr(0,str.size()-1); - } + if(str.size() > 0) + { + if (str == "GDCM::Unfound") + { + return ""; + } + if (str[str.size()-1]==' ') + { + return irclean(str.substr(0,str.size()-1)); + } + if (str[str.size()-1]==0) + { + return irclean(str.substr(0,str.size()-1)); + } + } return str; } //======================================================================== - + //===================================================================== void DicomImageReader::ReadAttributes(const std::string& filename, std::map& attr) { - GimmickMessage(2,"Reading attributes from DICOM file '" <SetLoadMode( GDCM_NAME_SPACE::LD_ALL); + //GDCM_NAME_SPACE::File* file = GDCM_NAME_SPACE::File::New(); + boost::shared_ptr file(GDCM_NAME_SPACE::File::New(), DicomImageReader::deleter()); + + GDCM_NAME_SPACE::Document *doc= GDCM_NAME_SPACE::File::New(); + doc->SetLoadMode( GDCM_NAME_SPACE::LD_ALL); doc->SetFileName(filename.c_str()); doc->Load(); file->SetLoadMode( GDCM_NAME_SPACE::LD_ALL); file->SetFileName(filename.c_str()); file->Load(); - if (file->IsReadable() ||((GDCM_NAME_SPACE::Document*) file)->IsReadable()) + if (file->IsReadable())// ||((GDCM_NAME_SPACE::Document*) file)->IsReadable()) { - std::map::iterator i; for (i=attr.begin();i!=attr.end();++i) { @@ -136,20 +137,20 @@ namespace creaImageIO } else { - uint16_t gr; uint16_t el; + uint16_t gr; + tree::AttributeDescriptor::GetDicomGroupElementFromKey(i->first,gr,el); if ( ( gr!=0 ) && ( el!=0 ) ) { - std::string val = file->GetEntryString(gr,el); + std::string val = file->GetEntryString(gr,el); i->second = irclean(val); } } } } - file->Delete(); } - + //===================================================================== } // namespace creaImageIO