X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=src2%2FcreaImageIOGimmickView.cpp;h=4cf4cb5be6f37bab2e910cdf4b509a49f8d8e104;hb=75a36cc2a5936be131f570520d4cc2f74bd0c548;hp=a16c09675fc323a6e41a9807e1339792bfb4c982;hpb=7c5180e6b19690ba9a264f2a66c04bc0a03c53ef;p=creaImageIO.git diff --git a/src2/creaImageIOGimmickView.cpp b/src2/creaImageIOGimmickView.cpp index a16c096..4cf4cb5 100644 --- a/src2/creaImageIOGimmickView.cpp +++ b/src2/creaImageIOGimmickView.cpp @@ -1,18 +1,71 @@ #include #include +#include "boost/filesystem.hpp" + +namespace fs = boost::filesystem; namespace creaImageIO { + + ///Class used to represent the actual state of the image selected and to perform comparisons on its values + class ImageExtent + { + public: + ImageExtent(const std::string& x, const std::string& y, const std::string& z, const std::string& t) + { + sscanf(x.c_str(),"%d",&mExtent[0]); + sscanf(y.c_str(),"%d",&mExtent[1]); + sscanf(z.c_str(),"%d",&mExtent[2]); + sscanf(t.c_str(),"%d",&mExtent[3]); + if(x==""){mExtent[0]=1;} + if(y==""){mExtent[1]=1;} + if(z==""){mExtent[2]=1;} + if(t==""){mExtent[3]=1;} + + if (mExtent[3]>1) mDim=4; + else if (mExtent[2]>1) mDim=3; + else if (mExtent[1]>1) mDim=2; + else if (mExtent[0]>1) mDim=1; + else mDim=0; + } + + + ///Clears the extent + void Clear() { mExtent[0] = mExtent[1] = mExtent[2] = mExtent[3] = 1; } + + ///Returns true if the two extents are compatible + bool IsCompatible( const ImageExtent& ); + + ///Adds the extent passed as a parameter to the current extent + void Add ( const ImageExtent& ); + + ///Returns the ieth position of the extent + int Get(int i) { return mExtent[i]; } + + ///Returns the dimension of the current image + void SetDimension(int dim) { mDim=dim; } + + ///Returns the dimension of the current image + int GetDimension() { return mDim; } + + private: + int mExtent[4]; + int mDim; + }; + + //====================================================================== + //====================================================================== // CTor - GimmickView::GimmickView(Gimmick* gimmick, int threads) + GimmickView::GimmickView(boost::shared_ptr gimmick, int threads) : mGimmick(gimmick), mReader(threads) { GimmickDebugMessage(1,"GimmickView::GimmickView" <CreateTreeView(i->second); } } + + /// Create a tree view with a given name + void GimmickView::CreateSingleTreeView(std::string &i_name) + { + this->CreateTreeView(mGimmick->GetTreeHandlerMap()[i_name]); + + } + + //====================================================================== //====================================================================== @@ -70,202 +133,309 @@ namespace creaImageIO GimmickError("INTERNAL ERROR : GimmickView::UpdateTreeView : '" <second->UpdateLevel(l); + i->second->UpdateLevel(l); + } + + //====================================================================== + /// Clears the status and begins a new selection process + void GimmickView::ResetExtent() + { + if(mImageExtent!=0) + { + mImageExtent.reset(); + } + valid=true; + } + + //====================================================================== + + //====================================================================== + bool ImageExtent::IsCompatible(const ImageExtent& ie) + { + bool compatible=true; + ImageExtent * extent= (ImageExtent*)&ie; + if((*extent).Get(0)!=Get(0) + || (*extent).Get(1)!=Get(1)) + { + compatible=false; + } + return compatible; } + + //====================================================================== + + //====================================================================== + void ImageExtent::Add(const ImageExtent& ie) + { + ImageExtent * extent= (ImageExtent*)&ie; + mExtent[2]+=(*extent).Get(2); + if(mExtent[2]>1) + { + SetDimension(3); + } + } + + //====================================================================== + /// No selected image + bool GimmickView::NoValidateSelected () + { + GimmickDebugMessage(2,"Validating selected"<& sel, int min_dim, int max_dim) + bool GimmickView::ValidateSelected (tree::Node* sel, int min_dim, int max_dim) { - GimmickMessage(2,"Validating selected"<0) + + if(sel==0) { - std::vector::iterator i; - std::string row; - std::string col; - std::string plane; - - //Validation between image sizes - for (i=sel.begin(); i!=sel.end() && valid; ++i) + mMessage="Cannot have 0 images selected!"; + valid=false; + } + else + { + boost::shared_ptr ie=boost::shared_ptr(new ImageExtent((*sel).GetAttribute("D0028_0010"), + (*sel).GetAttribute("D0028_0011"), + (*sel).GetAttribute("D0028_0012"), + "")); + if(mImageExtent==0) + { + mImageExtent=ie; + if((mImageExtent->Get(min_dim-1)<2)||(mImageExtent->Get(max_dim)>1)) { - if(i==sel.begin()) + valid=false; + } + else + { + std::stringstream out; + out << mImageExtent->GetDimension() << "D image " << mImageExtent->Get(0) << "x"<< mImageExtent->Get(1) << "x"<< mImageExtent->Get(2) <<" selected"; + mMessage = out.str(); + mImageExtent->SetDimension(2); + valid=true; + } + } + else + { + if(mImageExtent->IsCompatible(*ie)) + { + if(mImageExtent->GetDimension()==max_dim && mImageExtent->Get(max_dim)>2) + { + std::stringstream out; + out<<"Cannot add this image to selection : would result in a "<GetDimension()+1<<"D image!"; + mMessage=out.str(); + valid=false; + } + else if(max_dim<3) { - row=(*i)->GetAttribute("D0028_0010"); - col=(*i)->GetAttribute("D0028_0011"); - plane=(*i)->GetAttribute("D0028_0012"); - level=(*i)->GetLevel(); - + std::stringstream out; + out<<"Selecting "<GetDimension()<<"D images is not allowed !"; + mMessage=out.str(); + valid=false; + } + else if(min_dim==3 && (ie->Get(2)+mImageExtent->Get(2))<2) + { + std::stringstream out; + out << "Cannot build the selection as it would result in a "; + out << mImageExtent->GetDimension(); + out << "D image, and the minimum is "; + out << min_dim; + out << "D!"; + mMessage=out.str(); + valid=false; } else { - if(((*i)->GetAttribute("D0028_0010"))!=row || - ((*i)->GetAttribute("D0028_0011"))!=col || - ((*i)->GetAttribute("D0028_0012"))!=plane) - { - mMessage="The selected images are not compatible."; - valid=false; - } + mImageExtent->Add(*ie); + std::stringstream out; + out << mImageExtent->GetDimension() << "D image " << mImageExtent->Get(0) << "x"<< mImageExtent->Get(1) << "x"<< mImageExtent->Get(2) <<" selected"; + mMessage = out.str(); } } - - //Dimention validation - //Compatibility with maximum and minimum - if(valid) - { - - int rows; - int cols; - int planes; - std::string s; - std::istringstream t(s); - s=row; - t >> rows; - if(row==""){rows=1;} - s=col; - t >> cols; - if(col==""){cols=1;} - s=plane; - t >> planes; - if(plane==""){planes=1;} - - int dim = 0; - if (planes>1) dim=3; - else if (cols>1) dim=2; - else if (rows>1) dim=1; - - if (dim == 0) - { - mMessage="Unknown image dimension : cannot select !"; - valid= false; - } - else if (dim>max_dim) - { - mMessage="Selecting "; - mMessage+=dim; - mMessage+="D images is not allowed !"; - valid= false; - } - if ( dim == max_dim ) - { - mMessage="Cannot add this image to selection : would result in a "; - mMessage+=(dim+1); - mMessage+="D image!"; - - valid= false; - } - if ( dim < min_dim && sel.size()<2 ) - { - GimmickDebugMessage(2, "State Check: Dim: " - <& s,std::vector im, int dimension) - { - +void GimmickView::ReadImagesNotThreaded(std::vector& s, std::vector im, int dimension) +{ + +/* remember! + +#define GIMMICK_NO_IMAGE_SELECTION 0 +#define GIMMICK_2D_IMAGE_SELECTION 2 +#define GIMMICK_3D_IMAGE_SELECTION 3 +#define GIMMICK_4D_IMAGE_SELECTION 4 + +#define NATIVE 0 +#define _2D 2 +#define _3D 3 + +*/ // Create the output data if (im.size()==1) - { - + { // Only one image : give it vtkImageData* out = vtkImageData::New(); - GimmickMessage(1, "State Check: Full Filename: " - <GetAttribute("FullFileName") - <ShallowCopy(mReader.GetImage(im.front()->GetAttribute("FullFileName"))); + GimmickDebugMessage(3, "State Check: Full Filename: " + <ShallowCopy(mReader.GetImage(im.front())); s.push_back( out ); - } - - else if (im.size()>1) - { - vtkImageData* first = mReader.GetImage( im.front()->GetAttribute("FullFileName")); - if (dimension==2) - { - // n2D to 3D - vtkImageData* out = vtkImageData::New(); - out->CopyStructure(first); - out->SetScalarType(first->GetScalarType()); - int ext[6]; - first->GetExtent(ext); - ext[5] = im.size(); - out->SetExtent(ext); - // LG : TODO : Z Spacing ? - - out->AllocateScalars(); - - //first->Print(std::cout); - // out->Print(std::cout); - - int dim[3]; - first->GetDimensions(dim); - unsigned long imsize = - ( (unsigned long)first->GetScalarPointer(0,1,0) - - (unsigned long)first->GetScalarPointer(0,0,0)) - *dim[1]; - - int slice = 0; - std::vector::iterator it; - for (it=im.begin(); it!=im.end(); ++it) - { - //std::cout << "copying slice "<GetAttribute("FullFileName")); + } + else if (im.size()>1) // Test inutile ? JPR + { + vtkImageData* first = mReader.GetImage( im.front()); + if (dimension == 2) + { + // n3D + std::vector::iterator it; + for (it=im.begin(); it!=im.end(); ++it) + { + vtkImageData* out = vtkImageData::New(); + out->ShallowCopy(mReader.GetImage(*it)); + s.push_back(out); + } + } + else + { + // n*2D to 3D + vtkImageData* out = vtkImageData::New(); + out->CopyStructure(first); + out->SetScalarType(first->GetScalarType()); + int ext[6]; + //first->GetExtent(ext); // JPR + first->GetWholeExtent(ext); // renvoie egalement 0,0 en Z // JPR + +std::cout <<"in GimmickView::ReadImagesNotThreaded GetWholeExtent ext ="; +for (int jjj=0;jjj<6;jjj++) + std:cout << " [" << jjj << "]=" << ext[jjj]; +std::cout << std::endl; + + if(ext[5] == 0) + { + ext[5] = im.size()-1; + } + else + { + ext[5] = ext[5] * im.size()-1; // to deal with multiframes - JPR + } + out->SetExtent(ext); + + // LG : TODO : Z Spacing ? + + out->AllocateScalars(); + + //first->Print(std::cout); + // out->Print(std::cout); + + int dim[3]; + first->GetDimensions(dim); + unsigned long imsize = dim[0] * dim[1]; + imsize = imsize * dim[2] ; // deal with multiframes // JPR +//EED 03-11-2009 + imsize = imsize * first->GetScalarSize(); + + int slice = 0; + std::vector::iterator it; + for (it=im.begin(); it!=im.end(); ++it) + { - void* src = cur->GetScalarPointer(0,0,0); - void* dst = out->GetScalarPointer(0,0,slice); - // std::cout << "src="<ShallowCopy(mReader.GetImage(im.front())); + s.push_back( out ); + } + else if (im.size()>1) // Test inutile ? JPR + { + vtkImageData* first = mReader.GetImage( im.front()); + if (dimension == 2) + { + // n3D + std::vector::iterator it; + for (it=im.begin(); it!=im.end(); ++it) + { + vtkImageData* out = vtkImageData::New(); + out->ShallowCopy(mReader.GetImage(*it)); + s.push_back(out); + } + } + else + { + // n2D to 3D // NO! + // n *2D + T in a vector : + + std::vector::iterator it; + for (it=im.begin(); it!=im.end(); ++it) + { + vtkImageData* out = mReader.GetImage( (*it)); + s.push_back(out); + } + } + } +} + //====================================================================== + + //====================================================================== + ///Requests the reading of an image + void GimmickView::RequestReading(tree::Node* n, + int prio, int selection_index, boost::shared_ptr p) + { + if(!mReaderStarted) + { + mReader.Start(); + mReaderStarted=true; } - } - + ImageEventType t(n,selection_index); + t.pointerHolder = p; + mImageEventMap[n->GetAttribute("FullFileName")] = t; + mReader.Request(this,n->GetAttribute("FullFileName"),prio); } - - //====================================================================== //====================================================================== @@ -274,28 +444,78 @@ namespace creaImageIO MultiThreadImageReaderUser::EventType e, vtkImageData* image) { - GimmickDebugMessage(5, + GimmickDebugMessage(7, "MultiThreadImageReader event : "<::iterator i; - i = mImageFileNameToNode.find(filename); - if (i!=mImageFileNameToNode.end()) - { - GimmickDebugMessage(5, - "Pushing image of file '"<second<<"' in queue" - <second,image)); - } + if (e==ImageLoaded) + { + if (filename.size()==0) + { + //What to do in this case? + /* + GimmickDebugMessage(5, + "Pushing unknown image in queue" + < 0 + if(mImageEventMap.size()>0){ + i = mImageEventMap.find(filename); + if (i!=mImageEventMap.end()) + { + GimmickDebugMessage(5, + "Putting image of file '"<second); + ie.image = image; + ie.pointerHolder->Set(ie.image); + //mImageEventMap.erase(i); + } + } + } + else if (e==Error) + { + std::string mess="ERROR: MultiThreadImageReader: Cannot read image in file "; + mess+=filename; + mess+="\n"; + GimmickMessage(1,mess); + ImageEventTypeMap::iterator i; + i = mImageEventMap.find(filename); + if (i!=mImageEventMap.end()) + { + ImageEventType ie(i->second); + ie.image = image; + ie.pointerHolder->Set(GetDefaultImage()); + //mImageEventMap.erase(i); + } + } + + else if (e==ImageUnloaded) + { + std::string mess="Unloaded image in file "; + mess+=filename; + mess+="\n"; + GimmickMessage(1,mess); + ImageEventTypeMap::iterator i; + i = mImageEventMap.find(filename); + if (i!=mImageEventMap.end()) + { + ImageEventType ie(i->second); + ie.image = image; + ie.pointerHolder->Set(GetDefaultImage()); + //mImageEventMap.erase(i); + } + } } - + + //==================================================================== + + //==================================================================== + void GimmickView::ConnectValidationObserver(ValidationCallbackType callback) + { + mValidationSignal.connect(callback); + } } // EO namespace creaImageIO -