X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=tools%2FCMakeLists.txt;h=25cd46f8d9e0eb60afd60797d53a287c1f38c035;hb=9549006e11b3c64415cdb3925448deaf8e71dbe4;hp=7b1a9fa7ec3b8d93dcf3d2a337907900d574ee6f;hpb=4efd93f02e07c2d8fe45f29f9579cabe27a93c1a;p=clitk.git diff --git a/tools/CMakeLists.txt b/tools/CMakeLists.txt index 7b1a9fa..25cd46f 100644 --- a/tools/CMakeLists.txt +++ b/tools/CMakeLists.txt @@ -64,31 +64,16 @@ IF (CLITK_BUILD_TOOLS) TARGET_LINK_LIBRARIES(clitkZeroVF clitkCommon ${ITK_LIBRARIES}) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkZeroVF) - WRAP_GGO(clitkImageExtractLine_GGO_C clitkImageExtractLine.ggo) - ADD_EXECUTABLE(clitkImageExtractLine clitkImageExtractLine.cxx ${clitkImageExtractLine_GGO_C}) - TARGET_LINK_LIBRARIES(clitkImageExtractLine clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageExtractLine) - WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo) ADD_EXECUTABLE(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C}) TARGET_LINK_LIBRARIES(clitkSplitImage clitkCommon ${ITK_LIBRARIES} ) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSplitImage) - WRAP_GGO(clitkVFMerge_GGO_C clitkVFMerge.ggo) - ADD_EXECUTABLE(clitkVFMerge clitkVFMerge.cxx ${clitkVFMerge_GGO_C}) - TARGET_LINK_LIBRARIES(clitkVFMerge clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFMerge) - WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo) ADD_EXECUTABLE(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C}) TARGET_LINK_LIBRARIES(clitkWriteDicomSeries clitkCommon ${ITK_LIBRARIES} ) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWriteDicomSeries) - WRAP_GGO(clitkAverageTemporalDimension_GGO_C clitkAverageTemporalDimension.ggo) - ADD_EXECUTABLE(clitkAverageTemporalDimension clitkAverageTemporalDimension.cxx ${clitkAverageTemporalDimension_GGO_C}) - TARGET_LINK_LIBRARIES(clitkAverageTemporalDimension clitkCommon ${ITK_LIBRARIES} ) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAverageTemporalDimension) - WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo) ADD_EXECUTABLE(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx ${clitkMedianTemporalDimension_GGO_C}) @@ -108,19 +93,14 @@ IF (CLITK_BUILD_TOOLS) WRAP_GGO(clitkAffineTransform_GGO_C clitkAffineTransform.ggo) ADD_EXECUTABLE(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C}) TARGET_LINK_LIBRARIES(clitkAffineTransform clitkCommon ${ITK_LIBRARIES} ) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image) + SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform) WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo) ADD_EXECUTABLE(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C}) TARGET_LINK_LIBRARIES(clitkSetBackground clitkCommon ${ITK_LIBRARIES}) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetBackground) - WRAP_GGO(clitkGuerreroVentilation_GGO_C clitkGuerreroVentilation.ggo) - ADD_EXECUTABLE(clitkGuerreroVentilation clitkGuerreroVentilation.cxx clitkGuerreroVentilationGenericFilter.cxx ${clitkGuerreroVentilation_GGO_C}) - TARGET_LINK_LIBRARIES(clitkGuerreroVentilation clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGuerreroVentilation) - - WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo) + WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo) ADD_EXECUTABLE(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C}) TARGET_LINK_LIBRARIES(clitkGammaIndex clitkCommon ${VTK_LIBRARIES} ${ITK_LIBRARIES}) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex) @@ -163,26 +143,6 @@ IF (CLITK_BUILD_TOOLS) TARGET_LINK_LIBRARIES(clitkDicomRTStruct2Image clitkDicomRTStruct clitkCommon ${ITK_LIBRARIES} ) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image) - # WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo) - # ADD_EXECUTABLE(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C}) - # TARGET_LINK_LIBRARIES(clitkImage2DicomRTStruct clitkDicomRTStruct clitkCommon ${ITK_LIBRARIES} ) - # SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImage2DicomRTStruct) - - WRAP_GGO(clitkImageLog_GGO_C clitkImageLog.ggo) - ADD_EXECUTABLE(clitkImageLog clitkImageLog.cxx ${clitkImageLog_GGO_C}) - TARGET_LINK_LIBRARIES(clitkImageLog ${ITK_LIBRARIES} clitkCommon) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLog) - - WRAP_GGO(clitkFilter_GGO_C clitkFilter.ggo) - ADD_EXECUTABLE(clitkFilter clitkFilter.cxx clitkFilterGenericFilter.cxx ${clitkFilter_GGO_C}) - TARGET_LINK_LIBRARIES(clitkFilter ${ITK_LIBRARIES} clitkCommon) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFilter) - - WRAP_GGO(clitkConeBeamProjectImage_GGO_C clitkConeBeamProjectImage.ggo) - ADD_EXECUTABLE(clitkConeBeamProjectImage clitkConeBeamProjectImage.cxx clitkConeBeamProjectImageGenericFilter.cxx ${clitkConeBeamProjectImage_GGO_C}) - TARGET_LINK_LIBRARIES(clitkConeBeamProjectImage ${ITK_LIBRARIES} clitkCommon ) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkConeBeamProjectImage) - WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo) ADD_EXECUTABLE(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C}) TARGET_LINK_LIBRARIES(clitkComposeVF ${ITK_LIBRARIES} clitkCommon) @@ -220,63 +180,13 @@ IF (CLITK_BUILD_TOOLS) WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo) ADD_EXECUTABLE(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C}) TARGET_LINK_LIBRARIES(clitkImageMoment clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image) + SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageMoment) WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo) ADD_EXECUTABLE(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C}) TARGET_LINK_LIBRARIES(clitkImageStatistics clitkCommon ${ITK_LIBRARIES}) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics) - WRAP_GGO(clitkSetOrigin_GGO_C clitkSetOrigin.ggo) - ADD_EXECUTABLE(clitkSetOrigin clitkSetOrigin.cxx clitkSetOriginGenericFilter.cxx ${clitkSetOrigin_GGO_C}) - TARGET_LINK_LIBRARIES(clitkSetOrigin clitkCommon ${ITK_LIBRARIES} ) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetOrigin) - - WRAP_GGO(clitkGetOrigin_GGO_C clitkGetOrigin.ggo) - ADD_EXECUTABLE(clitkGetOrigin clitkGetOrigin.cxx clitkGetOriginGenericFilter.cxx ${clitkGetOrigin_GGO_C}) - TARGET_LINK_LIBRARIES(clitkGetOrigin clitkCommon ${ITK_LIBRARIES} ) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGetOrigin) - - WRAP_GGO(clitkGetDirection_GGO_C clitkGetDirection.ggo) - ADD_EXECUTABLE(clitkGetDirection clitkGetDirection.cxx clitkGetDirectionGenericFilter.cxx ${clitkGetDirection_GGO_C}) - TARGET_LINK_LIBRARIES(clitkGetDirection clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGetDirection) - - WRAP_GGO(clitkSetDirection_GGO_C clitkSetDirection.ggo) - ADD_EXECUTABLE(clitkSetDirection clitkSetDirection.cxx clitkSetDirectionGenericFilter.cxx ${clitkSetDirection_GGO_C}) - TARGET_LINK_LIBRARIES(clitkSetDirection clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetDirection) - - WRAP_GGO(clitkGetSize_GGO_C clitkGetSize.ggo) - ADD_EXECUTABLE(clitkGetSize clitkGetSize.cxx clitkGetSizeGenericFilter.cxx ${clitkGetSize_GGO_C}) - TARGET_LINK_LIBRARIES(clitkGetSize clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGetSize) - - WRAP_GGO(clitkGetSpacing_GGO_C clitkGetSpacing.ggo) - ADD_EXECUTABLE(clitkGetSpacing clitkGetSpacing.cxx clitkGetSpacingGenericFilter.cxx ${clitkGetSpacing_GGO_C}) - TARGET_LINK_LIBRARIES(clitkGetSpacing clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGetSpacing) - - WRAP_GGO(clitkSetSpacing_GGO_C clitkSetSpacing.ggo) - ADD_EXECUTABLE(clitkSetSpacing clitkSetSpacing.cxx clitkSetSpacingGenericFilter.cxx ${clitkSetSpacing_GGO_C}) - TARGET_LINK_LIBRARIES(clitkSetSpacing clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image) - - WRAP_GGO(clitkCombineImage_GGO_C clitkCombineImage.ggo) - ADD_EXECUTABLE(clitkCombineImage clitkCombineImage.cxx clitkCombineImageGenericFilter.cxx ${clitkCombineImage_GGO_C}) - TARGET_LINK_LIBRARIES(clitkCombineImage clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCombineImage) - - WRAP_GGO(clitkPermuteAxes_GGO_C clitkPermuteAxes.ggo) - ADD_EXECUTABLE(clitkPermuteAxes clitkPermuteAxes.cxx clitkPermuteAxesGenericFilter.cxx ${clitkPermuteAxes_GGO_C}) - TARGET_LINK_LIBRARIES(clitkPermuteAxes clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPermuteAxes) - - WRAP_GGO(clitkChangeImageOrientation_GGO_C clitkChangeImageOrientation.ggo) - ADD_EXECUTABLE(clitkChangeImageOrientation clitkChangeImageOrientation.cxx clitkChangeImageOrientationGenericFilter.cxx ${clitkChangeImageOrientation_GGO_C}) - TARGET_LINK_LIBRARIES(clitkChangeImageOrientation clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageOrientation) - WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo) ADD_EXECUTABLE(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C}) TARGET_LINK_LIBRARIES(clitkVFConvert ${ITK_LIBRARIES} clitkCommon ) @@ -292,55 +202,15 @@ IF (CLITK_BUILD_TOOLS) TARGET_LINK_LIBRARIES(clitkVectorImageToImage clitkCommon ${ITK_LIBRARIES}) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorImageToImage) - WRAP_GGO(clitkBSplineCoefficientsToValues_GGO_C clitkBSplineCoefficientsToValues.ggo) - ADD_EXECUTABLE(clitkBSplineCoefficientsToValues clitkBSplineCoefficientsToValues.cxx clitkBSplineCoefficientsToValuesGenericFilter.cxx ${clitkBSplineCoefficientsToValues_GGO_C}) - TARGET_LINK_LIBRARIES(clitkBSplineCoefficientsToValues clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBSplineCoefficientsToValues) - - WRAP_GGO(clitkValuesToBSplineCoefficients_GGO_C clitkValuesToBSplineCoefficients.ggo) - ADD_EXECUTABLE(clitkValuesToBSplineCoefficients clitkValuesToBSplineCoefficients.cxx clitkValuesToBSplineCoefficientsGenericFilter.cxx ${clitkValuesToBSplineCoefficients_GGO_C}) - TARGET_LINK_LIBRARIES(clitkValuesToBSplineCoefficients clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkValuesToBSplineCoefficients) - ADD_EXECUTABLE(clitkMIP clitkMIP.cxx clitkMIPGenericFilter.cxx) TARGET_LINK_LIBRARIES(clitkMIP clitkMIPLib clitkCommon ${ITK_LIBRARIES}) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMIP) - WRAP_GGO(clitkRelativePosition_GGO_C clitkRelativePosition.ggo) - ADD_EXECUTABLE(clitkRelativePosition clitkRelativePosition.cxx ${clitkRelativePosition_GGO_C}) - TARGET_LINK_LIBRARIES(clitkRelativePosition clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePosition) - - WRAP_GGO(clitkLabelImageOverlapMeasure_GGO_C clitkLabelImageOverlapMeasure.ggo) - ADD_EXECUTABLE(clitkLabelImageOverlapMeasure clitkLabelImageOverlapMeasure.cxx ${clitkLabelImageOverlapMeasure_GGO_C}) - TARGET_LINK_LIBRARIES(clitkLabelImageOverlapMeasure clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} ) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkLabelImageOverlapMeasure) - - WRAP_GGO(clitkRelativePositionAnalyzer_GGO_C clitkRelativePositionAnalyzer.ggo) - ADD_EXECUTABLE(clitkRelativePositionAnalyzer ../itk/clitkRelativePositionDataBase.cxx clitkRelativePositionAnalyzer.cxx ${clitkRelativePositionAnalyzer_GGO_C}) - TARGET_LINK_LIBRARIES(clitkRelativePositionAnalyzer clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePositionAnalyzer) - - WRAP_GGO(clitkRelativePositionDataBaseAnalyzer_GGO_C clitkRelativePositionDataBaseAnalyzer.ggo) - ADD_EXECUTABLE(clitkRelativePositionDataBaseAnalyzer ../itk/clitkRelativePositionDataBase.cxx clitkRelativePositionDataBaseAnalyzer.cxx ${clitkRelativePositionDataBaseAnalyzer_GGO_C}) - TARGET_LINK_LIBRARIES(clitkRelativePositionDataBaseAnalyzer clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePositionDataBaseAnalyzer) - - WRAP_GGO(clitkRelativePositionDataBaseBuilder_GGO_C clitkRelativePositionDataBaseBuilder.ggo) - ADD_EXECUTABLE(clitkRelativePositionDataBaseBuilder ../itk/clitkRelativePositionDataBase.cxx clitkRelativePositionDataBaseBuilder.cxx ${clitkRelativePositionDataBaseBuilder_GGO_C}) - TARGET_LINK_LIBRARIES(clitkRelativePositionDataBaseBuilder clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePositionDataBaseBuilder) - WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo) ADD_EXECUTABLE(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C}) TARGET_LINK_LIBRARIES(clitkTransformLandmarks clitkCommon ${ITK_LIBRARIES}) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkTransformLandmarks) - WRAP_GGO(clitkLineProfile_GGO_C clitkLineProfile.ggo) - ADD_EXECUTABLE(clitkLineProfile clitkLineProfile.cxx clitkLineProfileGenericFilter.cxx ${clitkLineProfile_GGO_C}) - TARGET_LINK_LIBRARIES(clitkLineProfile clitkCommon ${ITK_LIBRARIES}) - SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkLineProfile) - ADD_EXECUTABLE(clitkMakeSphereImage clitkMakeSphereImage.cxx) # clitkLineProfileGenericFilter.cxx ${clitkLineProfile_GGO_C}) TARGET_LINK_LIBRARIES(clitkMakeSphereImage clitkCommon ${ITK_LIBRARIES}) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMakeSphereImage) @@ -360,8 +230,12 @@ IF (CLITK_BUILD_TOOLS) TARGET_LINK_LIBRARIES(clitkCatImage clitkCommon ${ITK_LIBRARIES}) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage) - IF(CLITK_EXPERIMENTAL) + WRAP_GGO(clitkCoeffsToDVF_GGO_C clitkCoeffsToDVF.ggo) + ADD_EXECUTABLE(clitkCoeffsToDVF clitkCoeffsToDVF.cxx ${clitkCoeffsToDVF_GGO_C}) + TARGET_LINK_LIBRARIES(clitkCoeffsToDVF clitkCommon ${ITK_LIBRARIES}) + SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCoeffsToDVF) + IF(CLITK_EXPERIMENTAL) WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo) ADD_EXECUTABLE(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C}) TARGET_LINK_LIBRARIES(clitkBinaryImageToMesh ${ITK_LIBRARIES} ${VTK_LIBRARIES}) @@ -378,8 +252,17 @@ IF (CLITK_BUILD_TOOLS) SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer) ENDIF(CLITK_EXPERIMENTAL) + IF(ITK_VERSION_MAJOR VERSION_LESS 4) + MESSAGE(WARNING "clitkDicomRTPlan2Gate is not compatible with GDCM<2 (ITK<4). It will not be build.") + ELSE(ITK_VERSION_MAJOR VERSION_LESS 4) + WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo) + ADD_EXECUTABLE(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c) + TARGET_LINK_LIBRARIES(clitkDicomRTPlan2Gate clitkCommon ${ITK_LIBRARIES}) + SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate) + ENDIF(ITK_VERSION_MAJOR VERSION_LESS 4) + SET_TARGET_PROPERTIES(${TOOLS_INSTALL} PROPERTIES INSTALL_RPATH "${VTK_DIR}:${ITK_DIR}" ) - INSTALL (TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE) + INSTALL (TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE) ENDIF(CLITK_BUILD_TOOLS)