X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=tools%2FCMakeLists.txt;h=34bb132d7bf6dcd6a695bc5fa688bb99c2206cf3;hb=b50c4ae3e2850ad593d2c991b56e04ed22748f99;hp=999b48af632ff32a3a30143bf406dfd9bc5bd00a;hpb=2d15d93fdc52e45e42353e10e011675e8b1e9a34;p=clitk.git diff --git a/tools/CMakeLists.txt b/tools/CMakeLists.txt index 999b48a..34bb132 100644 --- a/tools/CMakeLists.txt +++ b/tools/CMakeLists.txt @@ -21,9 +21,6 @@ add_library(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx ${clitkIm WRAP_GGO(clitkVectorArithm_GGO_C clitkVectorArithm.ggo) add_library(clitkVectorArithmLib clitkVectorArithmGenericFilter.cxx ${clitkVectorArithm_GGO_C}) -WRAP_GGO(clitkResampleImage_GGO_C clitkResampleImage.ggo) -add_library(clitkResampleImageLib clitkResampleImageGenericFilter.cxx ${clitkResampleImage_GGO_C}) - WRAP_GGO(clitkMIP_GGO_C clitkMIP.ggo) add_library(clitkMIPLib clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C}) @@ -57,6 +54,11 @@ if(CLITK_BUILD_TOOLS) target_link_libraries(clitkImageInfo clitkCommon) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageInfo) + WRAP_GGO(clitkScintivolStats_GGO_C clitkScintivolStats.ggo) + add_executable(clitkScintivolStats clitkScintivolStats.cxx ${clitkScintivolStats_GGO_C}) + target_link_libraries(clitkScintivolStats clitkCommon) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkScintivolStats) + add_executable(clitkImageConvert clitkImageConvert.cxx) target_link_libraries(clitkImageConvert clitkImageConvertLib clitkCommon) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageConvert) @@ -64,11 +66,15 @@ if(CLITK_BUILD_TOOLS) add_executable(clitkBinarizeImage clitkBinarizeImage.cxx) target_link_libraries(clitkBinarizeImage clitkBinarizeImageLib clitkCommon) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinarizeImage) - + add_executable(clitkProfileImage clitkProfileImage.cxx) target_link_libraries(clitkProfileImage clitkProfileImageLib clitkCommon) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkProfileImage) + add_executable(clitkHistogramImage clitkHistogramImage.cxx) + target_link_libraries(clitkHistogramImage clitkHistogramImageLib clitkCommon) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkHistogramImage) + WRAP_GGO(clitkVFResample_GGO_C clitkVFResample.ggo) add_executable(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C}) target_link_libraries(clitkVFResample clitkCommon) @@ -99,11 +105,41 @@ if(CLITK_BUILD_TOOLS) target_link_libraries(clitkWriteDicomSeries clitkCommon ) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWriteDicomSeries) + WRAP_GGO(clitkImage2Dicom_GGO_C clitkImage2Dicom.ggo) + add_executable(clitkImage2Dicom clitkImage2Dicom.cxx ${clitkImage2Dicom_GGO_C}) + target_link_libraries(clitkImage2Dicom clitkCommon ) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImage2Dicom) + + WRAP_GGO(clitkSpect2Dicom_GGO_C clitkSpect2Dicom.ggo) + add_executable(clitkSpect2Dicom clitkSpect2Dicom.cxx ${clitkSpect2Dicom_GGO_C}) + target_link_libraries(clitkSpect2Dicom clitkCommon ) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSpect2Dicom) + + WRAP_GGO(clitkChangeDicomTag_GGO_C clitkChangeDicomTag.ggo) + add_executable(clitkChangeDicomTag clitkChangeDicomTag.cxx ${clitkChangeDicomTag_GGO_C}) + target_link_libraries(clitkChangeDicomTag clitkCommon ) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeDicomTag) + WRAP_GGO(clitkGateSimulation2Dicom_GGO_C clitkGateSimulation2Dicom.ggo) add_executable(clitkGateSimulation2Dicom clitkGateSimulation2Dicom.cxx ${clitkGateSimulation2Dicom_GGO_C}) target_link_libraries(clitkGateSimulation2Dicom clitkCommon ) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGateSimulation2Dicom) + WRAP_GGO(clitkPartitionEnergyWindowDicom_GGO_C clitkPartitionEnergyWindowDicom.ggo) + add_executable(clitkPartitionEnergyWindowDicom clitkPartitionEnergyWindowDicom.cxx ${clitkPartitionEnergyWindowDicom_GGO_C}) + target_link_libraries(clitkPartitionEnergyWindowDicom clitkCommon ) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPartitionEnergyWindowDicom) + + WRAP_GGO(clitkUpdateVRTagDicom_GGO_C clitkUpdateVRTagDicom.ggo) + add_executable(clitkUpdateVRTagDicom clitkUpdateVRTagDicom.cxx ${clitkUpdateVRTagDicom_GGO_C}) + target_link_libraries(clitkUpdateVRTagDicom clitkCommon ) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUpdateVRTagDicom) + + WRAP_GGO(clitkImage2DicomDose_GGO_C clitkImage2DicomDose.ggo) + add_executable(clitkImage2DicomDose clitkImage2DicomDose.cxx ${clitkImage2DicomDose_GGO_C}) + target_link_libraries(clitkImage2DicomDose clitkCommon) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImage2DicomDose) + WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo) add_executable(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx ${clitkMedianTemporalDimension_GGO_C}) @@ -121,13 +157,14 @@ if(CLITK_BUILD_TOOLS) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkInvertVF) WRAP_GGO(clitkAffineTransform_GGO_C clitkAffineTransform.ggo) + add_library(clitkAffineTransformLib clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C}) add_executable(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C}) target_link_libraries(clitkAffineTransform clitkCommon ) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform) WRAP_GGO(clitkElastixTransformToMatrix_GGO_C clitkElastixTransformToMatrix.ggo) add_executable(clitkElastixTransformToMatrix clitkElastixTransformToMatrix.cxx ${clitkElastixTransformToMatrix_GGO_C}) - target_link_libraries(clitkElastixTransformToMatrix clitkCommon ) + target_link_libraries(clitkElastixTransformToMatrix clitkAffineTransformLib clitkCommon ) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkElastixTransformToMatrix) WRAP_GGO(clitkMatrixToElastixTransform_GGO_C clitkMatrixToElastixTransform.ggo) @@ -173,10 +210,6 @@ if(CLITK_BUILD_TOOLS) target_link_libraries(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter) - add_executable(clitkResampleImage clitkResampleImage.cxx) - target_link_libraries(clitkResampleImage clitkResampleImageLib clitkCommon) - set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkResampleImage) - WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo) add_executable(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C}) target_link_libraries(clitkMinMaxMask clitkCommon ) @@ -196,6 +229,11 @@ if(CLITK_BUILD_TOOLS) WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo) add_executable(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C}) target_link_libraries(clitkImage2DicomRTStruct clitkDicomRTStruct) + + #include pugiXML to parse XML + WRAP_GGO(clitkXml2DicomRTStruct_GGO_C clitkXml2DicomRTStruct.ggo) + add_executable(clitkXml2DicomRTStruct ../utilities/pugixml/pugixml.cpp clitkXml2DicomRTStruct.cxx ${clitkXml2DicomRTStruct_GGO_C}) + target_link_libraries(clitkXml2DicomRTStruct clitkDicomRTStruct) endif() WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo) @@ -242,6 +280,16 @@ if(CLITK_BUILD_TOOLS) target_link_libraries(clitkImageStatistics clitkCommon) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics) + WRAP_GGO(clitkSUVPeak_GGO_C clitkSUVPeak.ggo) + add_executable(clitkSUVPeak clitkSUVPeak.cxx clitkSUVPeakGenericFilter.cxx ${clitkSUVPeak_GGO_C}) + target_link_libraries(clitkSUVPeak clitkCommon) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSUVPeak) + + WRAP_GGO(clitkRTStructStatistics_GGO_C clitkRTStructStatistics.ggo) + add_executable(clitkRTStructStatistics clitkRTStructStatistics.cxx clitkRTStructStatisticsGenericFilter.cxx ${clitkRTStructStatistics_GGO_C}) + target_link_libraries(clitkRTStructStatistics clitkCommon) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRTStructStatistics) + WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo) add_executable(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C}) target_link_libraries(clitkVFConvert clitkCommon ) @@ -276,6 +324,11 @@ if(CLITK_BUILD_TOOLS) target_link_libraries(clitkSum clitkCommon) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSum) + WRAP_GGO(clitkExtrude_GGO_C clitkExtrude.ggo) + add_executable(clitkExtrude clitkExtrude.cxx ${clitkExtrude_GGO_C}) + target_link_libraries(clitkExtrude clitkCommon) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtrude) + WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo) add_executable(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C}) target_link_libraries(clitkTransformLandmarks clitkCommon) @@ -345,6 +398,12 @@ if(CLITK_BUILD_TOOLS) target_link_libraries(clitkImageIntensityWindowing clitkCommon ) set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing) + WRAP_GGO(clitkMaskOfIntegratedIntensity_GGO_C clitkMaskOfIntegratedIntensity.ggo) + add_executable(clitkMaskOfIntegratedIntensity clitkMaskOfIntegratedIntensity.cxx ${clitkMaskOfIntegratedIntensity_GGO_C}) + target_link_libraries(clitkMaskOfIntegratedIntensity clitkCommon ) + set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskOfIntegratedIntensity) + + WRAP_GGO(clitkBlurImage_GGO_C clitkBlurImage.ggo) add_executable(clitkBlurImage clitkBlurImage.cxx ${clitkBlurImage_GGO_C}) target_link_libraries(clitkBlurImage clitkCommon )