X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=tools%2FCMakeLists.txt;h=7b1a9fa7ec3b8d93dcf3d2a337907900d574ee6f;hb=cb7e79ab5154f7be47e9667dc5fb255288fbb117;hp=fecaef0c72683bd88e61ebd2fc05af3cf354bff6;hpb=20e6f1426e3df1f632b515dd5f162f0ac9fe3f3b;p=clitk.git

diff --git a/tools/CMakeLists.txt b/tools/CMakeLists.txt
index fecaef0..7b1a9fa 100644
--- a/tools/CMakeLists.txt
+++ b/tools/CMakeLists.txt
@@ -1,7 +1,3 @@
-#=========================================================
-INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
-#=========================================================
-
 # Add Libraries used in vv and clitk to avoid recompilation
 WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
 ADD_LIBRARY(clitkCropImageLib clitkCropImageGenericFilter.cxx ${clitkCropImage_GGO_C})
@@ -35,10 +31,15 @@ IF (CLITK_BUILD_TOOLS)
   TARGET_LINK_LIBRARIES(clitkDicom2Image clitkCommon ${ITK_LIBRARIES})
   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image)
 
+  WRAP_GGO(clitkDicomWave2Text_GGO_C clitkDicomWave2Text.ggo)
+  ADD_EXECUTABLE(clitkDicomWave2Text clitkDicomWave2Text.cxx ${clitkDicomWave2Text_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkDicomWave2Text clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomWave2Text)
+
   WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
   ADD_EXECUTABLE(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
   TARGET_LINK_LIBRARIES(clitkImageInfo clitkCommon ${ITK_LIBRARIES})
-  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image)
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageInfo)
 
   ADD_EXECUTABLE(clitkImageConvert clitkImageConvert.cxx)
   TARGET_LINK_LIBRARIES(clitkImageConvert clitkImageConvertLib clitkCommon ${ITK_LIBRARIES})
@@ -121,7 +122,7 @@ IF (CLITK_BUILD_TOOLS)
 
   WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
   ADD_EXECUTABLE(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
-  TARGET_LINK_LIBRARIES(clitkGammaIndex vtkCommon vtkFiltering vtkGraphics vtkIO vtkImaging)
+  TARGET_LINK_LIBRARIES(clitkGammaIndex clitkCommon ${VTK_LIBRARIES} ${ITK_LIBRARIES})
   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
 
   ADD_EXECUTABLE(clitkImageArithm clitkImageArithm.cxx)
@@ -157,10 +158,15 @@ IF (CLITK_BUILD_TOOLS)
   TARGET_LINK_LIBRARIES(clitkAutoCrop clitkCommon ${ITK_LIBRARIES} )
   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAutoCrop)
 
-  WRAP_GGO(clitkDicomRTStruct2BinaryImage_GGO_C clitkDicomRTStruct2BinaryImage.ggo)
-  ADD_EXECUTABLE(clitkDicomRTStruct2BinaryImage clitkDicomRTStruct2BinaryImage.cxx ${clitkDicomRTStruct2BinaryImage_GGO_C})
-  TARGET_LINK_LIBRARIES(clitkDicomRTStruct2BinaryImage clitkDicomRTStruct clitkCommon ${ITK_LIBRARIES} )
-  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2BinaryImage)
+  WRAP_GGO(clitkDicomRTStruct2Image_GGO_C clitkDicomRTStruct2Image.ggo)
+  ADD_EXECUTABLE(clitkDicomRTStruct2Image clitkDicomRTStruct2Image.cxx ${clitkDicomRTStruct2Image_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkDicomRTStruct2Image clitkDicomRTStruct clitkCommon ${ITK_LIBRARIES} )
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image)
+
+  # WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo)
+  # ADD_EXECUTABLE(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C})
+  # TARGET_LINK_LIBRARIES(clitkImage2DicomRTStruct clitkDicomRTStruct clitkCommon ${ITK_LIBRARIES} )
+  # SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImage2DicomRTStruct)
 
   WRAP_GGO(clitkImageLog_GGO_C clitkImageLog.ggo)
   ADD_EXECUTABLE(clitkImageLog clitkImageLog.cxx ${clitkImageLog_GGO_C})
@@ -305,6 +311,26 @@ IF (CLITK_BUILD_TOOLS)
   TARGET_LINK_LIBRARIES(clitkRelativePosition clitkCommon ${ITK_LIBRARIES})
   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePosition)
 
+  WRAP_GGO(clitkLabelImageOverlapMeasure_GGO_C clitkLabelImageOverlapMeasure.ggo)
+  ADD_EXECUTABLE(clitkLabelImageOverlapMeasure clitkLabelImageOverlapMeasure.cxx ${clitkLabelImageOverlapMeasure_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkLabelImageOverlapMeasure clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkLabelImageOverlapMeasure)
+
+  WRAP_GGO(clitkRelativePositionAnalyzer_GGO_C clitkRelativePositionAnalyzer.ggo)
+  ADD_EXECUTABLE(clitkRelativePositionAnalyzer ../itk/clitkRelativePositionDataBase.cxx clitkRelativePositionAnalyzer.cxx ${clitkRelativePositionAnalyzer_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkRelativePositionAnalyzer clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePositionAnalyzer)
+
+  WRAP_GGO(clitkRelativePositionDataBaseAnalyzer_GGO_C clitkRelativePositionDataBaseAnalyzer.ggo)
+  ADD_EXECUTABLE(clitkRelativePositionDataBaseAnalyzer ../itk/clitkRelativePositionDataBase.cxx clitkRelativePositionDataBaseAnalyzer.cxx ${clitkRelativePositionDataBaseAnalyzer_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkRelativePositionDataBaseAnalyzer clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePositionDataBaseAnalyzer)
+
+  WRAP_GGO(clitkRelativePositionDataBaseBuilder_GGO_C clitkRelativePositionDataBaseBuilder.ggo)
+  ADD_EXECUTABLE(clitkRelativePositionDataBaseBuilder ../itk/clitkRelativePositionDataBase.cxx clitkRelativePositionDataBaseBuilder.cxx ${clitkRelativePositionDataBaseBuilder_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkRelativePositionDataBaseBuilder clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePositionDataBaseBuilder)
+
   WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
   ADD_EXECUTABLE(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
   TARGET_LINK_LIBRARIES(clitkTransformLandmarks clitkCommon ${ITK_LIBRARIES})
@@ -325,23 +351,34 @@ IF (CLITK_BUILD_TOOLS)
   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
   
   WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
-  ADD_EXECUTABLE(clitkPadImage clitkPadImage.cxx ${clitkPadImage_GGO_C})
+  ADD_EXECUTABLE(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
   TARGET_LINK_LIBRARIES(clitkPadImage clitkCommon ${ITK_LIBRARIES})
   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
 
+  WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
+  ADD_EXECUTABLE(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkCatImage clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
+
   IF(CLITK_EXPERIMENTAL)
 
     WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
     ADD_EXECUTABLE(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkBinaryImageToMesh ${ITK_LIBRARIES} vtkCommon vtkRendering)
+    TARGET_LINK_LIBRARIES(clitkBinaryImageToMesh ${ITK_LIBRARIES} ${VTK_LIBRARIES})
     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
 
+    WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
+    ADD_EXECUTABLE(clitkMeshToBinaryImage clitkMeshToBinaryImage.cxx ${clitkMeshToBinaryImage_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkMeshToBinaryImage clitkCommon ${ITK_LIBRARIES} ${VTK_LIBRARIES})
+    SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshToBinaryImage)
+
     WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
     ADD_EXECUTABLE(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkMeshViewer vtkCommon vtkRendering)
+    TARGET_LINK_LIBRARIES(clitkMeshViewer ${VTK_LIBRARIES})
     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
   ENDIF(CLITK_EXPERIMENTAL)
 
+  SET_TARGET_PROPERTIES(${TOOLS_INSTALL} PROPERTIES INSTALL_RPATH "${VTK_DIR}:${ITK_DIR}" )  
   INSTALL (TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)
 
 ENDIF(CLITK_BUILD_TOOLS)