X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=tools%2FclitkDicom2Image.cxx;h=aa63b0489bd50505255c2610640e8bbb4615c70e;hb=b7b8f2b040d1772c30c34653ee3fe0c27bc8fa71;hp=399168c958cfa0f916b8769879f62a50481d86e7;hpb=49a4b154c9a2af76b0f9143b4fabde0a4da6e798;p=clitk.git diff --git a/tools/clitkDicom2Image.cxx b/tools/clitkDicom2Image.cxx index 399168c..aa63b04 100644 --- a/tools/clitkDicom2Image.cxx +++ b/tools/clitkDicom2Image.cxx @@ -91,7 +91,7 @@ int main(int argc, char * argv[]) series_numbers.insert(series_number); theorigin[series_number] = gdcm::ImageHelper::GetOriginValue(hreader.GetFile()); theorientation[series_number] = gdcm::ImageHelper::GetDirectionCosinesValue(hreader.GetFile()); - if (args_info.extract_series_flag) { + if (args_info.patientSystem_flag) { double n1 = theorientation[series_number][1]*theorientation[series_number][5]- theorientation[series_number][2]*theorientation[series_number][4]; double n2 = theorientation[series_number][3]*theorientation[series_number][2]- @@ -241,7 +241,7 @@ int main(int argc, char * argv[]) } vvImageWriter::Pointer writer = vvImageWriter::New(); writer->SetInput(image); - if (args_info.extract_series_flag && !image->GetTransform().empty()) + if (args_info.patientSystem_flag && !image->GetTransform().empty()) writer->SetSaveTransform(true); writer->SetOutputFileName(outfile); writer->Update();