X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=tools%2FclitkDicomRTStruct2Image.ggo;h=8e6159a16ff837ef4148d14193d27017db2abe4a;hb=342abd5c807dab47a30d8369aca8f7e5c9242b2b;hp=980f8a92bcba6322586a158c0f4a8da3d5d695cc;hpb=7d1671bb2465e849fd16e636b5cd07426f5879ba;p=clitk.git diff --git a/tools/clitkDicomRTStruct2Image.ggo b/tools/clitkDicomRTStruct2Image.ggo index 980f8a9..8e6159a 100644 --- a/tools/clitkDicomRTStruct2Image.ggo +++ b/tools/clitkDicomRTStruct2Image.ggo @@ -1,24 +1,21 @@ # file clitkDicomRTStruct2BinaryImage.ggo package "clitk" -version "Convert DICOM RT Structure Set (contours) to binary image" +version "1.0" +description "Convert DICOM RT Structure Set (contours) to binary image" -option "config" - "Config file" string no -option "verbose" v "Verbose" flag off -option "verboseFile" - "Verbose file content" flag off -option "input" i "Input Dicom file" string yes -option "image" j "Used to read image info (spacing, origin)" string yes -option "output" o "Output image base filename (roi number and extension will be append)" string yes +option "config" - "Config file" string no +option "verbose" v "Verbose" flag off +option "verboseFile" - "Verbose file content" flag off +option "input" i "Input Dicom file" string yes +option "image" j "Used to read image info (spacing, origin)" string yes +option "output" o "Output image base filename (roi number and extension will be append)" string yes defgroup "ROIoption" groupdesc="an option of this group is required" -groupoption "roi" r "ROI to binarize (if -1 = all roi)" int no default="-1" group="ROIoption" -groupoption "roiName" n "ROI name to binarize (be wary of spaces in ROI names; if blank, use given 'roi' value)" string no default="" group="ROIoption" -groupoption "roiNameSubstr" s "Substring of ROI name to binarize (reuturns all matches; if blank, use given 'roiName' value)" string no default="" group="ROIoption" +groupoption "roi" r "ROI to binarize (if -1 = all roi)" int no default="-1" group="ROIoption" +groupoption "roiName" n "ROI name to binarize (be wary of spaces in ROI names; if blank, use given 'roi' value)" string no default="" group="ROIoption" +groupoption "roiNameSubstr" s "Substring of ROI name to binarize (reuturns all matches; if blank, use given 'roiName' value)" string no default="" group="ROIoption" -option "crop" c "Crop binary mask" flag off - -option "mha" - "Write the RTStruct as a mha image to avoid special character problems" flag off - -#option "roi" r "ROI to print (ID)" int no -#option "contour" c "contour to print (ID)" int no -#option "offset" o "to display points as image offsets" flag off +option "crop" c "Crop binary mask" flag off +option "mha" - "Write the RTStruct as a mha image to avoid special character problems" flag off +option "vtk" - "Write the vtk Mesh as a vtk file" flag off