X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=tools%2FclitkImage2DicomRTStruct.ggo;h=acf432dfe61f01803324265667adaee283de8f20;hb=8f42f40e826ecc4cc45e08ed41cc5596da74991c;hp=68334b1f9f0a2449142d47db91da8fce25f51511;hpb=5b568893e14e5d955fa14f653bd176b54c6aee0c;p=clitk.git

diff --git a/tools/clitkImage2DicomRTStruct.ggo b/tools/clitkImage2DicomRTStruct.ggo
index 68334b1..acf432d 100644
--- a/tools/clitkImage2DicomRTStruct.ggo
+++ b/tools/clitkImage2DicomRTStruct.ggo
@@ -1,20 +1,16 @@
 # file clitkImage2DicomRTStruct.ggo
 package "clitk"
-version "Convert (binary) image to DICOM RT Structure Set (contours)"
+version "Add a (binary) image inside a DICOM RT Structure Set (contours)"
 
-option "config"	  	 - "Config file"		     string  	no
-option "verbose"         v "Verbose"			     flag	off
+option "config"    - "Config file"                                                    string  no
+option "verbose"   v "Verbose"                                                        flag off
 
-option "input"		 i "Input image file (binary image"  string	yes
-option "output"		 o "Output DicomRT filename"	     string	yes
+option "input"     i "Input image file (binary image) to be converted into contours"  string multiple yes
+option "rtstruct"  r "Input rt struct"                                                string  yes
+option "dicom"     d "Input folder where the initial dicom ct is"                     string  yes
+option "output"    o "Output DicomRT filename"                                        string  yes
 
-
-# option "image"		 j "Used to read image info (spacing, origin)"    string	yes
-# option "roi"		 r "ROI to binarize (if -1 = all roi)"	          int    no default="-1"
-
-# option "crop"		 c "Crop binary mask"	         flag off
-
-#option "roi"		 r "ROI to print (ID)"		 int		no
-#option "contour"	 c "contour to print (ID)"	 int            no
-#option "offset"		 o "to display points as image offsets" flag	off
+option "threshold" t "Threshold for binary image"                                     float no default = "0.5"
+option "skip"      s "Do not write in output the structures that was in input"        flag off
+option "roitype"   - "Name of the type of roi added into the rt-struct"               string  no default = "ORGAN"