X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=tools%2FclitkImageResample.cxx;fp=tools%2FclitkImageResample.cxx;h=0000000000000000000000000000000000000000;hb=ef771c0cf6eb99f7cf2c6658bd8028eae20481e3;hp=a8545007bb5a91b8a0612e7e05a741ebb94d575d;hpb=6764ab075c799e9cdbf63e246f734c9be391199e;p=clitk.git

diff --git a/tools/clitkImageResample.cxx b/tools/clitkImageResample.cxx
deleted file mode 100644
index a854500..0000000
--- a/tools/clitkImageResample.cxx
+++ /dev/null
@@ -1,159 +0,0 @@
-/*=========================================================================
-  Program:   vv                     http://www.creatis.insa-lyon.fr/rio/vv
-
-  Authors belong to:
-  - University of LYON              http://www.universite-lyon.fr/
-  - Léon Bérard cancer center       http://oncora1.lyon.fnclcc.fr
-  - CREATIS CNRS laboratory         http://www.creatis.insa-lyon.fr
-
-  This software is distributed WITHOUT ANY WARRANTY; without even
-  the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
-  PURPOSE.  See the copyright notices for more information.
-
-  It is distributed under dual licence
-
-  - BSD        See included LICENSE.txt file
-  - CeCILL-B   http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-======================================================================-====*/
-#ifndef CLITKIMAGERESAMPLE_CXX
-#define CLITKIMAGERESAMPLE_CXX
-/**
-   ------------------------------------------------=
-   * @file   clitkImageResample.cxx
-   * @author David Sarrut <David.Sarrut@creatis.insa-lyon.fr>
-   * @date   23 Feb 2008 08:37:53
-   ------------------------------------------------=*/
-
-// clitk
-#include "clitkImageResample_ggo.h"
-#include "clitkIO.h"
-#include "clitkImageResampleGenericFilter.h"
-
-//--------------------------------------------------------------------
-int main(int argc, char * argv[])
-{
-
-  // Init command line
-  GGO(clitkImageResample, args_info);
-  CLITK_INIT;
-
-  // Read input image header to check image dimension
-  itk::ImageIOBase::Pointer header = clitk::readImageHeader(args_info.input_arg);
-  unsigned int dim = header->GetNumberOfDimensions();
-  std::string pixelTypeName = header->GetComponentTypeAsString(header->GetComponentType());
-
-  // Print image info if verbose
-  if (args_info.verbose_flag) {
-    std::cout << "Input image <" << args_info.input_arg << "> is ";
-    clitk::printImageHeader(header, std::cout);
-    std::cout << std::endl;
-  }
-
-  // Get input size/spacing
-  std::vector<int>    inputSize;
-  std::vector<double> inputSpacing;
-  inputSize.resize(dim);
-  inputSpacing.resize(dim);
-  for(unsigned int i=0; i<dim; i++) {
-    inputSpacing[i] = header->GetSpacing(i);
-    inputSize[i] = header->GetDimensions(i);
-  }
-
-  // Get options
-  std::vector<int>    outputSize;
-  std::vector<double> outputSpacing;
-  outputSize.resize(dim);
-  outputSpacing.resize(dim);
-
-  // Check options
-  if (!args_info.size_given && !args_info.spacing_given) {
-    std::cerr << "Please indicate output size or spacing." << std::endl;
-    exit(0);
-  }
-
-  // Check options
-  if (args_info.size_given && args_info.spacing_given) {
-    std::cerr << "Please indicate only output size or spacing, not both." << std::endl;
-    exit(0);
-  }
-
-  // Size is given and not spacing
-  if (args_info.size_given && !args_info.spacing_given) {
-    if (args_info.size_given != dim) {
-      std::cerr << "Input image is " << dim << "D, please give " << dim << " size numbers." << std::endl;
-      exit(0);
-    }
-    for(unsigned int i=0; i<dim; i++) {
-      if ((args_info.size_arg[i] == -1) || (args_info.size_arg[i]==0))
-        outputSize[i] = inputSize[i];
-      else
-        outputSize[i] = args_info.size_arg[i];
-      outputSpacing[i] = inputSize[i]*inputSpacing[i]/outputSize[i];
-    }
-  }
-
-  // Spacing is given and not size
-  if (!args_info.size_given && args_info.spacing_given) {
-    if (args_info.spacing_given != dim) {
-      if (args_info.spacing_given == 1) {
-        for(unsigned int i=0; i<dim; i++) outputSpacing[i] = args_info.spacing_arg[0];
-      } else {
-        std::cerr << "Input image is " << dim << "D, please give " << dim << " spacing numbers." << std::endl;
-        exit(0);
-      }
-    } else {
-      for(unsigned int i=0; i<dim; i++) {
-        if ((args_info.spacing_arg[i] == -1) || (args_info.spacing_arg[i]==0))
-          outputSpacing[i] = inputSpacing[i];
-        else
-          outputSpacing[i] = args_info.spacing_arg[i];
-
-      }
-    }
-    for(unsigned int i=0; i<dim; i++)
-      outputSize[i] = (int)lrint(inputSize[i]*inputSpacing[i]/outputSpacing[i]);
-  }
-
-  if (args_info.verbose_flag) {
-    std::cout << "Output image will be : " << std::endl;
-    DDV(outputSize,dim);
-    DDV(outputSpacing,dim);
-  }
-
-  // Get sigma option for Gaussian filter
-  std::vector<double> sigma;
-  sigma.resize(args_info.gauss_given);
-  std::copy(args_info.gauss_arg, args_info.gauss_arg+args_info.gauss_given, sigma.begin());
-  if (args_info.gauss_given) {
-    if (args_info.gauss_given != dim) {
-      if (args_info.gauss_given == 1) {
-        sigma.resize(dim);
-        for(unsigned int i=0; i<dim; i++) sigma[i] = args_info.gauss_arg[0];
-      } else {
-        std::cerr << "Input image is " << dim << "D, please give " << dim << " sigma numbers for gaussian filter." << std::endl;
-        exit(0);
-      }
-    }
-  }
-
-  // Create a filter
-  clitk::ImageResampleGenericFilter::Pointer filter = clitk::ImageResampleGenericFilter::New();
-  filter->SetInputFilename(args_info.input_arg);
-  filter->SetOutputSize(outputSize);
-  filter->SetOutputSpacing(outputSpacing);
-  filter->SetInterpolationName(args_info.interp_arg);
-  filter->SetBSplineOrder(args_info.order_arg);
-  filter->SetBLUTSampling(args_info.sampling_arg);
-  if (args_info.gauss_given)
-    filter->SetGaussianSigma(sigma);
-  filter->SetOutputFilename(args_info.output_arg);
-
-  // Go !
-  filter->Update();
-
-  // this is the end my friend
-  return 0;
-}// end main
-//--------------------------------------------------------------------
-
-#endif  /* end #define CLITKIMAGERESAMPLE_CXX */