X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=vtk%2FvtkGdcmReader.cxx;h=6db14bad8d58cf810a6740d8d0a34b4e337357e9;hb=8efd908ab5df098bb1a2dc8937dd3f92ad6d5154;hp=e6346dfcbf7f3dde284c3dbec9302185b15cf1b7;hpb=d00078b5e19310b379c8339fa8fe38362e8ca392;p=gdcm.git diff --git a/vtk/vtkGdcmReader.cxx b/vtk/vtkGdcmReader.cxx index e6346dfc..6db14bad 100644 --- a/vtk/vtkGdcmReader.cxx +++ b/vtk/vtkGdcmReader.cxx @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: vtkGdcmReader.cxx,v $ Language: C++ - Date: $Date: 2005/01/20 16:17:01 $ - Version: $Revision: 1.65 $ + Date: $Date: 2005/01/21 11:40:56 $ + Version: $Revision: 1.66 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -41,18 +41,18 @@ // is compared to this new value to find a modification in the class // parameters // 2b/ the core of ExecuteData then needs gdcmFile (which in turns -// initialises gdcmHeader in the constructor) in order to access +// initialises gdcmFile in the constructor) in order to access // the data-image. // // Possible solution: // maintain a list of gdcmFiles (created by say ExecuteInformation) created -// once and for all accross the life of vtkGdcmHeader (it would only load +// once and for all accross the life of vtkGdcmFile (it would only load // new gdcmFile if the user changes the list). ExecuteData would then use // those gdcmFile and hence avoid calling the construtor: // - advantage: the header of the files would only be parser once. // - drawback: once execute information is called (i.e. on creation of -// a vtkGdcmHeader) the gdcmFile structure is loaded in memory. -// The average size of a gdcmHeader being of 100Ko, is one +// a vtkGdcmFile) the gdcmFile structure is loaded in memory. +// The average size of a gdcmFile being of 100Ko, is one // loads 10 stacks of images with say 200 images each, you // end-up with a loss of 200Mo... // @@ -66,7 +66,7 @@ // ////////////////////////////////////////////////////////////// #include "gdcmFileHelper.h" -#include "gdcmHeader.h" +#include "gdcmFile.h" #include "vtkGdcmReader.h" //#include @@ -75,7 +75,7 @@ #include #include -vtkCxxRevisionMacro(vtkGdcmReader, "$Revision: 1.65 $"); +vtkCxxRevisionMacro(vtkGdcmReader, "$Revision: 1.66 $"); vtkStandardNewMacro(vtkGdcmReader); //----------------------------------------------------------------------------- @@ -461,8 +461,8 @@ int vtkGdcmReader::CheckFileCoherence() fclose(fp); // Stage 1.2: check for Gdcm parsability - gdcm::Header GdcmHeader(filename->c_str() ); - if (!GdcmHeader.IsReadable()) + gdcm::File GdcmFile(filename->c_str() ); + if (!GdcmFile.IsReadable()) { vtkErrorMacro(<< "Gdcm cannot parse file " << filename->c_str()); vtkErrorMacro(<< "Removing this file from readed files " @@ -472,7 +472,7 @@ int vtkGdcmReader::CheckFileCoherence() } // Stage 1.3: further gdcm compatibility on PixelType - std::string type = GdcmHeader.GetPixelType(); + std::string type = GdcmFile.GetPixelType(); if ( (type != "8U") && (type != "8S") && (type != "16U") && (type != "16S") && (type != "32U") && (type != "32S") ) @@ -486,9 +486,9 @@ int vtkGdcmReader::CheckFileCoherence() } // Stage 2: check coherence of the set of files - int NX = GdcmHeader.GetXSize(); - int NY = GdcmHeader.GetYSize(); - int NZ = GdcmHeader.GetZSize(); + int NX = GdcmFile.GetXSize(); + int NY = GdcmFile.GetYSize(); + int NZ = GdcmFile.GetZSize(); if (FoundReferenceFile) { // Stage 2.1: mandatory coherence stage: @@ -547,27 +547,27 @@ int vtkGdcmReader::CheckFileCoherence() ReferenceNZ = NZ; ReturnedTotalNumberOfPlanes += NZ - 1; // First plane already added this->ImageType = type; - this->PixelSize = GdcmHeader.GetPixelSize(); + this->PixelSize = GdcmFile.GetPixelSize(); - if( GdcmHeader.HasLUT() && this->AllowLookupTable ) + if( GdcmFile.HasLUT() && this->AllowLookupTable ) { // I could raise an error is AllowLookupTable is on and HasLUT() off - this->NumComponents = GdcmHeader.GetNumberOfScalarComponentsRaw(); + this->NumComponents = GdcmFile.GetNumberOfScalarComponentsRaw(); } else { - this->NumComponents = GdcmHeader.GetNumberOfScalarComponents(); //rgb or mono + this->NumComponents = GdcmFile.GetNumberOfScalarComponents(); //rgb or mono } //Set image spacing - this->DataSpacing[0] = GdcmHeader.GetXSpacing(); - this->DataSpacing[1] = GdcmHeader.GetYSpacing(); - this->DataSpacing[2] = GdcmHeader.GetZSpacing(); + this->DataSpacing[0] = GdcmFile.GetXSpacing(); + this->DataSpacing[1] = GdcmFile.GetYSpacing(); + this->DataSpacing[2] = GdcmFile.GetZSpacing(); //Set image origin - //this->DataOrigin[0] = GdcmHeader.GetXOrigin(); - //this->DataOrigin[1] = GdcmHeader.GetYOrigin(); - //this->DataOrigin[2] = GdcmHeader.GetZOrigin(); + //this->DataOrigin[0] = GdcmFile.GetXOrigin(); + //this->DataOrigin[1] = GdcmFile.GetYOrigin(); + //this->DataOrigin[2] = GdcmFile.GetZOrigin(); } } // End of loop on filename @@ -639,15 +639,15 @@ size_t vtkGdcmReader::LoadImageInMemory( // line comes first (for some axis related reasons?). Hence we need // to load the image line by line, starting from the end. - int numColumns = file.GetHeader()->GetXSize(); - int numLines = file.GetHeader()->GetYSize(); - int numPlanes = file.GetHeader()->GetZSize(); - int lineSize = NumComponents * numColumns * file.GetHeader()->GetPixelSize(); + int numColumns = file.GetFile()->GetXSize(); + int numLines = file.GetFile()->GetYSize(); + int numPlanes = file.GetFile()->GetZSize(); + int lineSize = NumComponents * numColumns * file.GetFile()->GetPixelSize(); int planeSize = lineSize * numLines; unsigned char *src; - if( file.GetHeader()->HasLUT() && AllowLookupTable ) + if( file.GetFile()->HasLUT() && AllowLookupTable ) { size = file.GetImageDataSize(); src = (unsigned char*) file.GetImageDataRaw();