X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=vv%2FvvImageContour.cxx;h=68dc72059a32d5cf02ac3424720149e6ffd9fc7f;hb=632adadb8b9230458aeab8ddccc736d674edc87a;hp=fa22d45e98d60c234aa825f10e36979967dfa837;hpb=163fa80ef3873595f3e3cf75fb03e53536d1a6ee;p=clitk.git diff --git a/vv/vvImageContour.cxx b/vv/vvImageContour.cxx index fa22d45..68dc720 100644 --- a/vv/vvImageContour.cxx +++ b/vv/vvImageContour.cxx @@ -1,9 +1,9 @@ /*========================================================================= Program: vv http://www.creatis.insa-lyon.fr/rio/vv - Authors belong to: + Authors belong to: - University of LYON http://www.universite-lyon.fr/ - - Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr + - Léon Bérard cancer center http://www.centreleonberard.fr - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr This software is distributed WITHOUT ANY WARRANTY; without even @@ -14,10 +14,11 @@ - BSD See included LICENSE.txt file - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html - ======================================================================-====*/ + ===========================================================================**/ #include "vvImageContour.h" #include "vvImage.h" +#include #include #include #include @@ -26,64 +27,71 @@ #include #include #include +#include //------------------------------------------------------------------------------ -vvImageContour::vvImageContour() { +vvImageContour::vvImageContour() +{ mTSlice = -1; mSlice = 0; mHiddenImageIsUsed = false; mDisplayModeIsPreserveMemory = true; + SetPreserveMemoryModeEnabled(true); + mPreviousOrientation = -1; + mPreviousValue=0; + mDepth = 1.0; + mSlice = 0; } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -vvImageContour::~vvImageContour() { - for (unsigned int i = 0; i < mSlicer->GetImage()->GetVTKImages().size(); i++) { - mSlicer->GetRenderer()->RemoveActor(mSquaresActorList[i]); - } +vvImageContour::~vvImageContour() +{ mSquaresActorList.clear(); - mSquaresList.clear(); - mClipperList.clear(); } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvImageContour::setSlicer(vvSlicer * slicer) { - mSlicer = slicer; +void vvImageContour::RemoveActors() +{ + for (unsigned int i = 0; i < mSquaresActorList.size(); i++) { + if (mSlicer != 0) { + if (mSlicer!= NULL) { + if (mSlicer->GetRenderer() != NULL) { + if (mSquaresActorList[i] != NULL) { + mSlicer->GetRenderer()->RemoveActor(mSquaresActorList[i]); + } + } + } + } + } +} +//------------------------------------------------------------------------------ + +//------------------------------------------------------------------------------ +void vvImageContour::SetSlicer(vvSlicer * slicer) +{ + mSlicer = slicer; + // Create an actor for each time slice for (unsigned int numImage = 0; numImage < mSlicer->GetImage()->GetVTKImages().size(); numImage++) { - vtkImageClip * mClipper = vtkImageClip::New(); - vtkMarchingSquares * mSquares = vtkMarchingSquares::New(); - // vtkPolyDataMapper * mSquaresMapper = vtkPolyDataMapper::New(); - vtkActor * mSquaresActor = vtkActor::New(); - - createNewActor(&mSquaresActor, &mSquares, &mClipper); - /* - mClipper->SetInput(mSlicer->GetImage()->GetVTKImages()[numImage]); - mSquares->SetInput(mClipper->GetOutput()); - mSquaresMapper->SetInput(mSquares->GetOutput()); - mSquaresMapper->ScalarVisibilityOff(); - mSquaresActor->SetMapper(mSquaresMapper); - mSquaresActor->GetProperty()->SetColor(1.0,0,0); - mSquaresActor->SetPickable(0); - mSquaresActor->VisibilityOff(); - mSlicer->GetRenderer()->AddActor(mSquaresActor); - */ - mSquaresActorList.push_back(mSquaresActor); - mSquaresList.push_back(mSquares); - mClipperList.push_back(mClipper); + CreateNewActor(numImage); } } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvImageContour::setImage(vvImage::Pointer image) { - DD("vvImageContour::setImage"); +void vvImageContour::SetImage(vvImage::Pointer image) +{ for (unsigned int numImage = 0; numImage < image->GetVTKImages().size(); numImage++) { +#if VTK_MAJOR_VERSION <= 5 mClipperList[numImage]->SetInput(image->GetVTKImages()[numImage]); +#else + mClipperList[numImage]->SetInputData(image->GetVTKImages()[numImage]); +#endif } mHiddenImageIsUsed = true; mHiddenImage = image; @@ -92,35 +100,50 @@ void vvImageContour::setImage(vvImage::Pointer image) { //------------------------------------------------------------------------------ -void vvImageContour::setPreserveModeEnabled(bool b) { - DD("setPreserveModeEnabled"); - DD(b); - DD(mDisplayModeIsPreserveMemory); +void vvImageContour::SetPreserveMemoryModeEnabled(bool b) +{ + // FastCache mode work only if threshold is always the same if (mDisplayModeIsPreserveMemory == b) return; mDisplayModeIsPreserveMemory = b; if (!b) { - initializeCacheMode(); + clitkExceptionMacro("TODO : not implemented yet"); + HideActors(); + InitializeCacheMode(); } else { for(unsigned int d=0; dGetProperty()->SetColor(r,g,b); + mSquaresActorList[i]->GetProperty()->SetOpacity(0.995); //in order to get VTK to turn on the alpha-blending in OpenGL + } +} +//------------------------------------------------------------------------------ + + +//------------------------------------------------------------------------------ +void vvImageContour::SetLineWidth(double w) +{ + for(unsigned int i=0; iGetProperty()->SetLineWidth(w); } } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvImageContour::hideActors() { +void vvImageContour::HideActors() +{ if (!mSlicer) return; mSlice = mSlicer->GetSlice(); for(unsigned int i=0; iGetSlice(); mTSlice = mSlicer->GetTSlice(); - // for(unsigned int i=0; iVisibilityOn(); - update(mValue); - //} + Update(mValue); +} +//------------------------------------------------------------------------------ + + +//------------------------------------------------------------------------------ +void vvImageContour::SetDepth(double d) +{ + mDepth = d; + // Move the actor to be visible + double position[3] = {0, 0, 0}; + int orientation = ComputeCurrentOrientation(); + position[orientation] = -mDepth; + + for(unsigned int i=0; iSetPosition(position); } //------------------------------------------------------------------------------ - //------------------------------------------------------------------------------ -void vvImageContour::update(double value) { +void vvImageContour::Update(double value) +{ if (!mSlicer) return; + if (mPreviousValue == value) { + if (mPreviousSlice == mSlicer->GetSlice()) { + if (mPreviousTSlice == mSlicer->GetTSlice()) { + if (mPreviousOrientation == ComputeCurrentOrientation()) { + return; // Nothing to do + } + } + } + } + // Get current threshold value - mValue= value; + mValue = value; + // Get current slice mSlice = mSlicer->GetSlice(); if (mDisplayModeIsPreserveMemory) { - updateWithPreserveMemoryMode(); + UpdateWithPreserveMemoryMode(); } else { - updateWithFastCacheMode(); + UpdateWithFastCacheMode(); } + + //mSlicer->Render(); //DS ---> REMOVE ?? + + mPreviousTSlice = mSlicer->GetTSlice(); + mPreviousSlice = mSlicer->GetSlice(); + mPreviousValue = value; + mPreviousOrientation = ComputeCurrentOrientation(); } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvImageContour::updateWithPreserveMemoryMode() { - +void vvImageContour::UpdateWithPreserveMemoryMode() +{ // Only change actor visibility if tslice change - if (mTSlice != mSlicer->GetTSlice()) { - if (mTSlice != -1) - mSquaresActorList[mTSlice]->VisibilityOff(); - mTSlice = mSlicer->GetTSlice(); - mSquaresActorList[mTSlice]->VisibilityOn(); - } - + mPreviousTslice = mTSlice; + mTSlice = mSlicer->GetTSlice(); + vtkMarchingSquares * mSquares = mSquaresList[mTSlice]; + vtkPolyDataMapper* mapper = mSquaresMapperList[mTSlice]; vtkImageClip * mClipper = mClipperList[mTSlice]; vtkActor * mSquaresActor = mSquaresActorList[mTSlice]; - int orientation = computeCurrentOrientation(); - // DD(orientation); + int orientation = ComputeCurrentOrientation(); - updateActor(mSquaresActor, mSquares, mClipper, mValue, orientation, mSlice); + UpdateActor(mSquaresActor, mapper, mSquares, mClipper, mValue, orientation, mSlice); - return; - - // Do it - mSquares->SetValue(0, mValue ); - - int* extent = mSlicer->GetImageActor()->GetDisplayExtent(); - // DD(extent[0]); - // DD(extent[1]); - // DD(extent[2]); - // DD(extent[3]); - // DD(extent[4]); - // DD(extent[5]); - - // int* extent2 = mClipper->GetInput()->GetDisplayExtent(); - // DD(extent2[0]); - // DD(extent2[1]); - int* extent2 = new int[6]; - if (mHiddenImageIsUsed) { - int * extent3; - extent3 = mHiddenImage->GetFirstVTKImageData()->GetExtent(); - for(int i=0; i<6; i++) extent2[i] = extent3[i]; - // DD(extent2[0]); - // DD(extent2[1]); - // DD(extent2[2]); - // DD(extent2[3]); - // DD(extent2[4]); - // DD(extent2[5]); - for(int i=0; i<6; i+=2) { - if (extent[i] != extent[i+1]) { - // extent[i] = extent2[i]; - // extent[i+1] = extent2[i+1]; - } - else { - // DD(extent[i]); - // DD(mSlicer->GetImage()->GetSpacing()[i/2]); - // DD(mHiddenImage->GetFirstVTKImageData()->GetSpacing()[i/2]); - - double s = (double)extent[i]*(double)mSlicer->GetImage()->GetSpacing()[i/2]; // in mm - // DD(s); - s = s+mSlicer->GetImage()->GetOrigin()[i/2]; // from origin - // DD(s); - s = s-mHiddenImage->GetFirstVTKImageData()->GetOrigin()[i/2]; // from corner second image - s = s/mHiddenImage->GetFirstVTKImageData()->GetSpacing()[i/2]; // in voxel - // DD(s); - - if (s == floor(s)) { - extent2[i] = extent2[i+1] = (int)floor(s); - } - else { - extent2[i] = (int)floor(s); - extent2[i+1] = extent2[i]; - } - // DD(extent2[i]); - } - } + if (mPreviousTslice != mTSlice) { + if (mPreviousTslice != -1) mSquaresActorList[mPreviousTslice]->VisibilityOff(); } - else extent2 = extent; - // DD(extent2[0]); - // DD(extent2[1]); - // DD(extent2[2]); - // DD(extent2[3]); - // DD(extent2[4]); - // DD(extent2[5]); - - mClipper->SetOutputWholeExtent(extent2[0],extent2[1],extent2[2], - extent2[3],extent2[4],extent2[5]); - int i; - for (i = 0; i < 6;i = i+2) { - if (extent[i] == extent[i+1]) { - break; - } - } - - switch (i) - { - case 0: - if (mSlicer->GetRenderer()->GetActiveCamera()->GetPosition()[0] > mSlice) - { - mSquaresActor->SetPosition(1,0,0); - } - else - { - mSquaresActor->SetPosition(-1,0,0); - } - break; - case 2: - if (mSlicer->GetRenderer()->GetActiveCamera()->GetPosition()[1] > mSlice) - { - mSquaresActor->SetPosition(0,1,0); - } - else - { - mSquaresActor->SetPosition(0,-1,0); - } - break; - case 4: - if (mSlicer->GetRenderer()->GetActiveCamera()->GetPosition()[2] > mSlice) - { - mSquaresActor->SetPosition(0,0,1); - } - else - { - mSquaresActor->SetPosition(0,0,-1); - } - break; - } - mSquares->Update(); + //mSlicer->Render(); } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvImageContour::initializeCacheMode() { - DD("vvImageContour::initializeCacheMode"); - +void vvImageContour::InitializeCacheMode() +{ +clitkExceptionMacro("TODO : not implemented yet"); mPreviousSlice = mPreviousOrientation = 0; - int dim; - if (mHiddenImageIsUsed) dim = mHiddenImage->GetNumberOfDimensions(); - else dim = mSlicer->GetImage()->GetNumberOfDimensions(); - DD(dim); + int dim = mSlicer->GetImage()->GetNumberOfDimensions(); mListOfCachedContourActors.resize(dim); for(int d=0; dGetSize()[d]; - else size = mSlicer->GetImage()->GetSize()[d]; - DD(size); + int size = mSlicer->GetImage()->GetSize()[d]; mListOfCachedContourActors[d].resize(size); for(int j=0; jGetImageActor()->GetDisplayExtent(); - + // Compute orientation int orientation; - for (orientation = 0; orientation < 6;orientation = orientation+2) { + for (orientation = 0; orientation < 6; orientation = orientation+2) { if (extent[orientation] == extent[orientation+1]) { break; } } orientation = orientation/2; - // DD(orientation); return orientation; } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvImageContour::updateWithFastCacheMode() { - DD("vvImageContour::updateWithFastCacheMode"); +void vvImageContour::UpdateWithFastCacheMode() +{ +clitkExceptionMacro("TODO : not implemented yet"); // Compute orientation - int orientation = computeCurrentOrientation(); + int orientation = ComputeCurrentOrientation(); - // Turn off previous actor - DD(mPreviousOrientation); - DD(mPreviousSlice); - if (mListOfCachedContourActors[mPreviousOrientation][mPreviousSlice] != NULL) - mListOfCachedContourActors[mPreviousOrientation][mPreviousSlice]->VisibilityOff(); - mPreviousSlice = mSlice; - mPreviousOrientation = orientation; + if ((mPreviousSlice == mSlice) && (mPreviousOrientation == orientation)) return; - // Display actor if it exist vtkActor * actor = mListOfCachedContourActors[orientation][mSlice]; if (actor != NULL) { - DD("Actor exist"); mListOfCachedContourActors[orientation][mSlice]->VisibilityOn(); + } else { + CreateNewActor(0); + //SR: commented out, this code is never reached anyway + //UpdateActor(mSquaresActor, mSquares, mClipper, mValue, orientation, mSlice); + //mListOfCachedContourActors[orientation][mSlice] = mSquaresActor; + //mSquaresActor->VisibilityOn(); } - else { - vtkImageClip * mClipper; - vtkMarchingSquares * mSquares; - vtkActor * mSquaresActor; - createNewActor(&mSquaresActor, &mSquares, &mClipper); - updateActor(mSquaresActor, mSquares, mClipper, mValue, orientation, mSlice); - mListOfCachedContourActors[orientation][mSlice] = mSquaresActor; - mSquaresActor->VisibilityOn(); - } + + if (mListOfCachedContourActors[mPreviousOrientation][mPreviousSlice] != NULL) + mListOfCachedContourActors[mPreviousOrientation][mPreviousSlice]->VisibilityOff(); + mPreviousSlice = mSlice; + mPreviousOrientation = orientation; } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvImageContour::createNewActor(vtkActor ** actor, - vtkMarchingSquares ** squares, - vtkImageClip ** clipper) { - // DD("vvImageContour::CreateNewActor"); - vtkActor * mSquaresActor = (*actor = vtkActor::New()); - vtkImageClip * mClipper = (*clipper = vtkImageClip::New()); - vtkMarchingSquares * mSquares = (*squares = vtkMarchingSquares::New()); - vtkPolyDataMapper * mSquaresMapper = vtkPolyDataMapper::New(); - - if (mHiddenImageIsUsed) - mClipper->SetInput(mHiddenImage->GetVTKImages()[0]); - else - mClipper->SetInput(mSlicer->GetImage()->GetVTKImages()[0]); - mSquares->SetInput(mClipper->GetOutput()); - mSquaresMapper->SetInput(mSquares->GetOutput()); - mSquaresMapper->ScalarVisibilityOff(); - mSquaresActor->SetMapper(mSquaresMapper); - mSquaresActor->GetProperty()->SetColor(1.0,0,0); - mSquaresActor->SetPickable(0); - mSquaresActor->VisibilityOff(); - mSlicer->GetRenderer()->AddActor(mSquaresActor); +void vvImageContour::CreateNewActor(int numImage) +{ + vtkSmartPointer squaresActor = vtkSmartPointer::New(); + vtkSmartPointer clipper = vtkSmartPointer::New(); + vtkSmartPointer squares = vtkSmartPointer::New(); + vtkSmartPointer squaresMapper = vtkSmartPointer::New(); + + if (mHiddenImageIsUsed) { +#if VTK_MAJOR_VERSION <= 5 + clipper->SetInput(mHiddenImage->GetVTKImages()[0]); +#else + clipper->SetInputData(mHiddenImage->GetVTKImages()[0]); +#endif + } else { +#if VTK_MAJOR_VERSION <= 5 + clipper->SetInput(mSlicer->GetImage()->GetVTKImages()[numImage]); +#else + clipper->SetInputData(mSlicer->GetImage()->GetVTKImages()[numImage]); +#endif + } +#if VTK_MAJOR_VERSION <= 5 + squares->SetInput(clipper->GetOutput()); + squaresMapper->SetInput(squares->GetOutput()); +#else + squares->SetInputConnection(clipper->GetOutputPort(0)); + squaresMapper->SetInputConnection(squares->GetOutputPort(0)); +#endif + squaresMapper->ScalarVisibilityOff(); + squaresActor->SetMapper(squaresMapper); + squaresActor->GetProperty()->SetColor(1.0,0,0); + squaresActor->GetProperty()->SetOpacity(0.995); //in order to get VTK to turn on the alpha-blending in OpenGL + squaresActor->SetPickable(0); + squaresActor->VisibilityOff(); + mSlicer->GetRenderer()->AddActor(squaresActor); + + mSquaresActorList.push_back(squaresActor); + mClipperList.push_back(clipper); + mSquaresList.push_back(squares); + mSquaresMapperList.push_back(squaresMapper); } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvImageContour::updateActor(vtkActor * actor, - vtkMarchingSquares * squares, - vtkImageClip * clipper, - int threshold, int orientation, int slice) { - // DD("Update Actor according to extend/threshold"); - - int* extent = mSlicer->GetImageActor()->GetDisplayExtent(); - clipper->SetOutputWholeExtent(extent[0],extent[1],extent[2], - extent[3],extent[4],extent[5]); +void vvImageContour::UpdateActor(vtkActor * actor, + vtkPolyDataMapper * mapper, + vtkMarchingSquares * squares, + vtkImageClip * clipper, + double threshold, int orientation, int slice) +{ + // Set parameter for the MarchigSquare squares->SetValue(0, threshold); + squares->Update(); + // Get image extent + int* extent = mSlicer->GetImageActor()->GetDisplayExtent(); - switch (orientation) { - case 0: if (mSlicer->GetRenderer()->GetActiveCamera()->GetPosition()[0] > slice) { - actor->SetPosition(1,0,0); - } - else { - actor->SetPosition(-1,0,0); - } - break; - case 1: if (mSlicer->GetRenderer()->GetActiveCamera()->GetPosition()[1] > slice) { - actor->SetPosition(0,1,0); - } - else { - actor->SetPosition(0,-1,0); - } - break; - case 2: if (mSlicer->GetRenderer()->GetActiveCamera()->GetPosition()[2] > slice) { - actor->SetPosition(0,0,1); - } - else { - actor->SetPosition(0,0,-1); + // Change extent if needed + int* extent2; + if (mHiddenImageIsUsed) { + extent2 = new int[6]; + int * extent3; + extent3 = mHiddenImage->GetFirstVTKImageData()->GetExtent(); + + for(int i=0; i<6; i++) extent2[i] = extent3[i]; + + double s = (double)extent[orientation*2]*(double)mSlicer->GetImage()->GetSpacing()[orientation]; // in mm + s = s+mSlicer->GetImage()->GetOrigin()[orientation]; // from origin + s = s-mHiddenImage->GetFirstVTKImageData()->GetOrigin()[orientation]; // from corner second image + s = s/mHiddenImage->GetFirstVTKImageData()->GetSpacing()[orientation]; // in voxel + + // Rint to the closest slice + extent2[orientation*2+1] = extent2[orientation*2] = (int)lrint(s); + + // Do not display a contour if there is no contour on this slice + // DD(extent2[orientation*2+1]); + // DD(extent3[orientation*2+1]); + // DD(extent2[orientation*2]); + // DD(extent3[orientation*2]); + if ((extent2[orientation*2+1] > extent3[orientation*2+1]) || + (extent2[orientation*2] < extent3[orientation*2])) { + actor->VisibilityOff(); + return; } - break; + else actor->VisibilityOn(); + + } else { + extent2 = extent; + actor->VisibilityOn(); } - squares->Update(); + + clipper->SetOutputWholeExtent(extent2[0],extent2[1],extent2[2], + extent2[3],extent2[4],extent2[5]); + + if (mHiddenImageIsUsed) delete extent2; + + // Move the actor to be visible + SetDepth(mDepth); + // double position[3] = {0, 0, 0}; + // DD(mDepth); + // position[orientation] = -mDepth; + // actor->SetPosition(position); + mapper->Update(); } //------------------------------------------------------------------------------