X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=vv%2FvvMainWindow.cxx;h=22041dffa23f3694b14d12f75d32012371666005;hb=3120a75ccfc05e6e5df576d8df817dae112528de;hp=e82590e4f02435ce0058cbeb90d2c671b6af3e59;hpb=4d67947110db0b85315ec010ba3db85781097a4a;p=clitk.git diff --git a/vv/vvMainWindow.cxx b/vv/vvMainWindow.cxx index e82590e..22041df 100644 --- a/vv/vvMainWindow.cxx +++ b/vv/vvMainWindow.cxx @@ -100,12 +100,13 @@ #define COLUMN_RELOAD_IMAGE 6 #define COLUMN_IMAGE_NAME 7 -#if CLITK_PRIVATE_FEATURES - #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.usf)" +#ifdef CLITK_PRIVATE_FEATURES +#define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan *.nii.gz *.usf)" #else - #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr)" +#define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan *.nii.gz)" #endif + /*Data Tree values 0,Qt::UserRole full filename 1,Qt::CheckStateRole checkbutton UL View @@ -315,7 +316,7 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() connect(this,SIGNAL(customContextMenuRequested(QPoint)),this,SLOT(ShowContextMenu(QPoint))); - connect(linkPanel,SIGNAL(addLink(QString,QString)),this,SLOT(AddLink(QString,QString))); + connect(linkPanel,SIGNAL(addLink(QString,QString,bool)),this,SLOT(AddLink(QString,QString,bool))); connect(linkPanel,SIGNAL(removeLink(QString,QString)),this,SLOT(RemoveLink(QString,QString))); connect(overlayPanel,SIGNAL(VFPropertyUpdated(int,int,int,int,double,double,double)),this,SLOT(SetVFProperty(int,int,int,int,double,double,double))); connect(overlayPanel,SIGNAL(OverlayPropertyUpdated(int,int,double,double)), @@ -703,51 +704,8 @@ void vvMainWindow::MergeImagesWithTime() mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str(); std::vector vector; - unsigned int currentDim = 0; - std::vector currentSpacing; - std::vector currentSize; - std::vector currentOrigin; - - for (int i = 0; i < files.size(); i++) { - itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO( - files[i].toStdString().c_str(), itk::ImageIOFactory::ReadMode); - if (reader) { - reader->SetFileName(files[i].toStdString().c_str()); - reader->ReadImageInformation(); - if (i == 0) - currentDim = reader->GetNumberOfDimensions(); - bool IsOk = true; - for (unsigned int j = 0; j < currentDim; j++) { - if (i == 0) { - if (j == 0) { - currentSpacing.resize(currentDim); - currentSize.resize(currentDim); - currentOrigin.resize(currentDim); - } - currentOrigin[j] = reader->GetOrigin(j); - currentSpacing[j] = reader->GetSpacing(j); - currentSize[j] = reader->GetDimensions(j); - } else if (currentDim != reader->GetNumberOfDimensions() - || currentSpacing[j] != reader->GetSpacing(j) - || currentSize[j] != (int)reader->GetDimensions(j) - || currentOrigin[j] != reader->GetOrigin(j)) { - QString error = "Cannot read file (too different from others "; - error += files[i].toStdString().c_str(); - QMessageBox::information(this,tr("Reading problem"),error); - IsOk = false; - break; - } - } - if (IsOk) - vector.push_back(files[i].toStdString()); - } else { - QString error = "Cannot read file info for "; - error += files[i].toStdString().c_str(); - error += "\n"; - error += "Maybe you're trying to open an image in an unsupported format?\n"; - QMessageBox::information(this,tr("Reading problem"),error); - } - } + for (int i = 0; i < files.size(); i++) + vector.push_back(files[i].toStdString()); sort(vector.begin(),vector.end()); if (vector.size() > 1) LoadImages(vector, vvImageReader::MERGEDWITHTIME); @@ -928,7 +886,7 @@ void vvMainWindow::LoadImages(std::vector files, vvImageReader::Loa DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton); //set the id of the image - QString id = files[i].c_str() + QString::number(mSlicerManagers.size()-1); + QString id = QDir::current().absoluteFilePath(files[i].c_str()) + QString::number(mSlicerManagers.size()-1); item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str()); mSlicerManagers.back()->SetId(id.toStdString()); @@ -1086,7 +1044,8 @@ void vvMainWindow::ImageInfoChanged() QString inputSizeInBytes; QString image = DataTree->selectedItems()[0]->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString(); - if (mSlicerManagers[index]->GetSlicer(0)->GetImage()->GetVTKImages().size() > 1 || playMode == 1) { + int nframes = mSlicerManagers[index]->GetSlicer(0)->GetTMax(); + if (nframes > 1 || playMode == 1) { playButton->setEnabled(1); frameRateLabel->setEnabled(1); frameRateSpinBox->setEnabled(1); @@ -1099,21 +1058,28 @@ void vvMainWindow::ImageInfoChanged() //read image header int NPixel = 1; + int tSlice = 0; vvImage::Pointer imageSelected; if (DataTree->topLevelItem(index) == DataTree->selectedItems()[0]) { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetTSlice(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "vector") { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetVF(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetOverlayTSlice(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "overlay") { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetOverlay(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetOverlayTSlice(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "fusion") { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetFusion(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetFusionTSlice(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "contour") { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetTSlice(); } else { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetTSlice(); } dimension = imageSelected->GetNumberOfDimensions(); @@ -1141,7 +1107,7 @@ void vvMainWindow::ImageInfoChanged() infoPanel->setOrigin(GetVectorDoubleAsString(origin)); infoPanel->setSpacing(GetVectorDoubleAsString(inputSpacing)); infoPanel->setNPixel(QString::number(NPixel)+" ("+inputSizeInBytes+")"); - transformation = imageSelected->GetTransform()[mSlicerManagers[index]->GetTSlice()]->GetMatrix(); + transformation = imageSelected->GetTransform()[tSlice]->GetMatrix(); infoPanel->setTransformation(Get4x4MatrixDoubleAsString(transformation)); landmarksPanel->SetCurrentLandmarks(mSlicerManagers[index]->GetLandmarks(), @@ -1236,25 +1202,70 @@ void vvMainWindow::ShowHelpDialog() //------------------------------------------------------------------------------ void vvMainWindow::ChangeViewMode() { - QList size; + typedef struct _SIZE{ + QSplitter* splitter; + QList size1, size2; + int cols[3]; + }SplitterSize; + SplitterSize sizes[4]; + sizes[0].splitter = OSplitter; + sizes[0].size1.push_back(1); + sizes[0].size1.push_back(0); + sizes[0].size2.push_back(1); + sizes[0].size2.push_back(0); + sizes[0].cols[0] = 2; + sizes[0].cols[1] = 3; + sizes[0].cols[2] = 4; + + sizes[1].splitter = ESplitter; + sizes[1].size1.push_back(0); + sizes[1].size1.push_back(1); + sizes[1].size2.push_back(1); + sizes[1].size2.push_back(0); + sizes[1].cols[0] = 1; + sizes[1].cols[1] = 3; + sizes[1].cols[2] = 4; + + sizes[2].splitter = OSplitter; + sizes[2].size1.push_back(1); + sizes[2].size1.push_back(0); + sizes[2].size2.push_back(0); + sizes[2].size2.push_back(1); + sizes[2].cols[0] = 1; + sizes[2].cols[1] = 2; + sizes[2].cols[2] = 4; + + sizes[3].splitter = ESplitter; + sizes[3].size1.push_back(0); + sizes[3].size1.push_back(1); + sizes[3].size2.push_back(0); + sizes[3].size2.push_back(1); + sizes[3].cols[0] = 1; + sizes[3].cols[1] = 2; + sizes[3].cols[2] = 3; + + int slicer = mSlicerManagers[mCurrentPickedImageIndex]->GetSelectedSlicer(); if (viewMode == 1) { - viewMode = 0; - size.push_back(1); - size.push_back(0); - splitter_3->setSizes(size); - OSplitter->setSizes(size); - DataTree->setColumnHidden(2,1); - DataTree->setColumnHidden(3,1); - DataTree->setColumnHidden(4,1); + if (slicer >= 0) { + viewMode = 0; + splitter_3->setSizes(sizes[slicer].size1); + sizes[slicer].splitter->setSizes(sizes[slicer].size2); + DataTree->setColumnHidden(sizes[slicer].cols[0],1); + DataTree->setColumnHidden(sizes[slicer].cols[1],1); + DataTree->setColumnHidden(sizes[slicer].cols[2],1); + } } else { - viewMode = 1; - size.push_back(1); - size.push_back(1); - splitter_3->setSizes(size); - OSplitter->setSizes(size); - DataTree->setColumnHidden(2,0); - DataTree->setColumnHidden(3,0); - DataTree->setColumnHidden(4,0); + QList size; + if (slicer >= 0) { + viewMode = 1; + size.push_back(1); + size.push_back(1); + splitter_3->setSizes(size); + sizes[slicer].splitter->setSizes(size); + DataTree->setColumnHidden(sizes[slicer].cols[0],0); + DataTree->setColumnHidden(sizes[slicer].cols[1],0); + DataTree->setColumnHidden(sizes[slicer].cols[2],0); + } } UpdateRenderWindows(); /* @@ -1262,10 +1273,12 @@ void vvMainWindow::ChangeViewMode() ** the associated Slicer to redraw crosses. */ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { - if (DataTree->topLevelItem(i)->data(COLUMN_UL_VIEW,Qt::CheckStateRole).toInt() > 1) +// if (DataTree->topLevelItem(i)->data(COLUMN_UL_VIEW,Qt::CheckStateRole).toInt() > 1) mSlicerManagers[i]->GetSlicer(0)->Render(); - if (DataTree->topLevelItem(i)->data(COLUMN_DL_VIEW,Qt::CheckStateRole).toInt() > 1) + mSlicerManagers[i]->GetSlicer(1)->Render(); +// if (DataTree->topLevelItem(i)->data(COLUMN_DL_VIEW,Qt::CheckStateRole).toInt() > 1) mSlicerManagers[i]->GetSlicer(2)->Render(); + mSlicerManagers[i]->GetSlicer(3)->Render(); } } //------------------------------------------------------------------------------ @@ -1493,38 +1506,28 @@ void vvMainWindow::InitDisplay() //------------------------------------------------------------------------------ void vvMainWindow::DisplaySliders(int slicer, int window) { + if(!mSlicerManagers[slicer]->GetSlicer(window)->GetRenderer()->GetDraw()) + return; + int range[2]; mSlicerManagers[slicer]->GetSlicer(window)->GetSliceRange(range); int position = mSlicerManagers[slicer]->GetSlicer(window)->GetSlice(); - - int tRange[2]; - tRange[0] = 0; - tRange[1] = mSlicerManagers[slicer]->GetSlicer(window)->GetTMax(); - int tPosition = mSlicerManagers[slicer]->GetSlicer(window)->GetTSlice(); - bool showHorizontal = false; - bool showVertical = false; - if (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 3 - || (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 2 - && mSlicerManagers[slicer]->GetType() != vvImageReader::IMAGEWITHTIME - && mSlicerManagers[slicer]->GetType() != vvImageReader::MERGEDWITHTIME)) - showVertical = true; - if (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 3 - || mSlicerManagers[slicer]->GetType() == vvImageReader::IMAGEWITHTIME - || mSlicerManagers[slicer]->GetType() == vvImageReader::MERGEDWITHTIME) - showHorizontal = true; - - if (showVertical) + if (range[1]>0) verticalSliders[window]->show(); else verticalSliders[window]->hide(); verticalSliders[window]->setRange(range[0],range[1]); verticalSliders[window]->setValue(position); - if (showHorizontal) + int tRange[2]; + tRange[0] = 0; + tRange[1] = mSlicerManagers[slicer]->GetSlicer(window)->GetTMax(); + if (tRange[1]>0) horizontalSliders[window]->show(); else horizontalSliders[window]->hide(); horizontalSliders[window]->setRange(tRange[0],tRange[1]); + int tPosition = mSlicerManagers[slicer]->GetSlicer(window)->GetMaxCurrentTSlice(); horizontalSliders[window]->setValue(tPosition); } //------------------------------------------------------------------------------ @@ -1773,6 +1776,32 @@ void vvMainWindow::ApplyWindowLevelToAllImages() } //------------------------------------------------------------------------------ +//------------------------------------------------------------------------------ +void vvMainWindow::ApplyWindowToSetOfImages(double window, unsigned int indexMin, unsigned int indexMax) +{ + for (unsigned int i = indexMin; i <= indexMax && i < mSlicerManagers.size(); i++) { + if (mSlicerManagers[i] == NULL) + continue; + mSlicerManagers[i]->SetColorWindow(window); + mSlicerManagers[i]->SetPreset(6); + mSlicerManagers[i]->Render(); + } +} +//------------------------------------------------------------------------------ + +//------------------------------------------------------------------------------ +void vvMainWindow::ApplyLevelToSetOfImages(double level, unsigned int indexMin, unsigned int indexMax) +{ + for (unsigned int i = indexMin; i <= indexMax && i < mSlicerManagers.size(); i++) { + if (mSlicerManagers[i] == NULL) + continue; + mSlicerManagers[i]->SetColorLevel(level); + mSlicerManagers[i]->SetPreset(6); + mSlicerManagers[i]->Render(); + } +} +//------------------------------------------------------------------------------ + //------------------------------------------------------------------------------ void vvMainWindow::UpdateLinkManager(std::string id, int slicer, double x, double y, double z, int temps) { @@ -1932,6 +1961,10 @@ void vvMainWindow::AddOverlayImage(int index, std::vector fileNames qApp->processEvents(); ImageInfoChanged(); QApplication::restoreOverrideCursor(); + + // Update the display to update, e.g., the sliders + for(int i=0; i<4; i++) + DisplaySliders(index, i); } else { QApplication::restoreOverrideCursor(); QString error = "Cannot import the new image.\n"; @@ -2101,7 +2134,11 @@ void vvMainWindow::OpenField() QString Extensions = "Images ( *.mhd)"; Extensions += ";;Images ( *.mha)"; - Extensions += ";;Images ( *.vf)"; + Extensions += ";;VF Images ( *.vf)"; + Extensions += ";;nii Images ( *.nii)"; + Extensions += ";;nrrd Images ( *.nrrd)"; + Extensions += ";;nhdr Images ( *.nhdr)"; + Extensions += ";;All Files (*)"; QString file = QFileDialog::getOpenFileName(this,tr("Load deformation field"),mInputPathName,Extensions); if (!file.isEmpty()) AddField(file,index); @@ -2413,8 +2450,14 @@ void vvMainWindow::LinkAllImages() } //------------------------------------------------------------------------------ -void vvMainWindow::AddLink(QString image1,QString image2) +void vvMainWindow::AddLink(QString image1,QString image2,bool fromPanel) { + if (!fromPanel) { + // delegate to linkPanel if call came from elsewhere... + linkPanel->addLinkFromIds(image1, image2); + return; + } + unsigned int sm1 = 0; unsigned int sm2 = 0; @@ -2671,23 +2714,24 @@ void vvMainWindow::UpdateTSlice(int slicer, int slice) //------------------------------------------------------------------------------ void vvMainWindow::UpdateSliceRange(int slicer, int min, int max, int tmin, int tmax) { - int position = int((min+max)/2); + //int position = int((min+max)/2); + int position = mSlicerManagers[mCurrentPickedImageIndex]->GetSlicer(slicer)->GetSlice(); if (slicer == 0) { - NOVerticalSlider->setValue(position); NOVerticalSlider->setRange(min,max); NOHorizontalSlider->setRange(tmin,tmax); + NOVerticalSlider->setValue(position); } else if (slicer == 1) { - NEVerticalSlider->setValue(position); NEVerticalSlider->setRange(min,max); NEHorizontalSlider->setRange(tmin,tmax); + NEVerticalSlider->setValue(position); } else if (slicer == 2) { - SOVerticalSlider->setValue(position); SOVerticalSlider->setRange(min,max); SOHorizontalSlider->setRange(tmin,tmax); + SOVerticalSlider->setValue(position); } else if (slicer == 3) { - SEVerticalSlider->setValue(position); SEVerticalSlider->setRange(min,max); SEHorizontalSlider->setRange(tmin,tmax); + SEVerticalSlider->setValue(position); } } //------------------------------------------------------------------------------ @@ -2895,9 +2939,8 @@ void vvMainWindow::SaveScreenshot(QVTKWidget *widget) vidwriter->SetInput(image); vidwriter->SetFileName(fileName.toStdString().c_str()); vidwriter->Start(); - vvImage * vvImg = mSlicerManagers[smIndex]->GetImage(); - int nSlice = vvImg->GetVTKImages().size(); - for(int i=0; iGetSlicer(0)->GetTMax(); + for(int i=0; i<=nSlice; i++) { mSlicerManagers[smIndex]->SetNextTSlice(0); vtkSmartPointer w2i = vtkSmartPointer::New(); w2i->SetInput(widget->GetRenderWindow()); @@ -2945,7 +2988,7 @@ void vvMainWindow::PlayPause() int image_number=DataTree->topLevelItemCount(); bool has_temporal; for (int i=0; iGetImage()->GetVTKImages().size() > 1) { + if (mSlicerManagers[i]->GetSlicer(0)->GetTMax() > 0) { has_temporal=true; break; } @@ -2966,7 +3009,7 @@ void vvMainWindow::PlayNext() ///Only play one slicer per SM, and only if the SM is being displayed for (int i=0; iGetImage()->GetVTKImages().size() > 1 && + if (mSlicerManagers[i]->GetSlicer(0)->GetTMax() > 0 && DataTree->topLevelItem(i)->data(j+1,Qt::CheckStateRole).toInt() > 0) { mSlicerManagers[i]->SetNextTSlice(j); break; @@ -2989,6 +3032,12 @@ void vvMainWindow::ShowLastImage() //------------------------------------------------------------------------------ void vvMainWindow::UpdateRenderWindows() { + for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { + mSlicerManagers[i]->GetSlicer(0)->UpdateLandmarks(); + mSlicerManagers[i]->GetSlicer(1)->UpdateLandmarks(); + mSlicerManagers[i]->GetSlicer(2)->UpdateLandmarks(); + mSlicerManagers[i]->GetSlicer(3)->UpdateLandmarks(); + } if (NOViewWidget->GetRenderWindow()) NOViewWidget->GetRenderWindow()->Render(); if (NEViewWidget->GetRenderWindow()) NEViewWidget->GetRenderWindow()->Render(); if (SOViewWidget->GetRenderWindow()) SOViewWidget->GetRenderWindow()->Render(); @@ -3075,7 +3124,7 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton); //set the id of the image - QString id = slicer_manager->GetFileName().c_str() + QString::number(mSlicerManagers.size()-1); + QString id = QDir::current().absoluteFilePath(slicer_manager->GetFileName().c_str()) + QString::number(mSlicerManagers.size()-1); item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str()); mSlicerManagers.back()->SetId(id.toStdString());