X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=vv%2FvvMainWindow.cxx;h=3add36d466e4e116c146310286b8e3ea9578b8a4;hb=fbd1f3ace65ab9540cb4e0b2d4af83b60232479e;hp=39414595b7b087a68e8134868d7c9f3a004c1b5b;hpb=fcb68b3bddcdcb38494e5100e50fbd18d69b1fb8;p=clitk.git diff --git a/vv/vvMainWindow.cxx b/vv/vvMainWindow.cxx index 3941459..3add36d 100644 --- a/vv/vvMainWindow.cxx +++ b/vv/vvMainWindow.cxx @@ -100,12 +100,13 @@ #define COLUMN_RELOAD_IMAGE 6 #define COLUMN_IMAGE_NAME 7 -#if CLITK_PRIVATE_FEATURES - #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.usf)" +#ifdef CLITK_PRIVATE_FEATURES +#define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan *.nii.gz *.usf)" #else - #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr)" +#define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan *.nii.gz)" #endif + /*Data Tree values 0,Qt::UserRole full filename 1,Qt::CheckStateRole checkbutton UL View @@ -315,7 +316,7 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() connect(this,SIGNAL(customContextMenuRequested(QPoint)),this,SLOT(ShowContextMenu(QPoint))); - connect(linkPanel,SIGNAL(addLink(QString,QString)),this,SLOT(AddLink(QString,QString))); + connect(linkPanel,SIGNAL(addLink(QString,QString,bool)),this,SLOT(AddLink(QString,QString,bool))); connect(linkPanel,SIGNAL(removeLink(QString,QString)),this,SLOT(RemoveLink(QString,QString))); connect(overlayPanel,SIGNAL(VFPropertyUpdated(int,int,int,int,double,double,double)),this,SLOT(SetVFProperty(int,int,int,int,double,double,double))); connect(overlayPanel,SIGNAL(OverlayPropertyUpdated(int,int,double,double)), @@ -703,51 +704,8 @@ void vvMainWindow::MergeImagesWithTime() mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str(); std::vector vector; - unsigned int currentDim = 0; - std::vector currentSpacing; - std::vector currentSize; - std::vector currentOrigin; - - for (int i = 0; i < files.size(); i++) { - itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO( - files[i].toStdString().c_str(), itk::ImageIOFactory::ReadMode); - if (reader) { - reader->SetFileName(files[i].toStdString().c_str()); - reader->ReadImageInformation(); - if (i == 0) - currentDim = reader->GetNumberOfDimensions(); - bool IsOk = true; - for (unsigned int j = 0; j < currentDim; j++) { - if (i == 0) { - if (j == 0) { - currentSpacing.resize(currentDim); - currentSize.resize(currentDim); - currentOrigin.resize(currentDim); - } - currentOrigin[j] = reader->GetOrigin(j); - currentSpacing[j] = reader->GetSpacing(j); - currentSize[j] = reader->GetDimensions(j); - } else if (currentDim != reader->GetNumberOfDimensions() - || currentSpacing[j] != reader->GetSpacing(j) - || currentSize[j] != (int)reader->GetDimensions(j) - || currentOrigin[j] != reader->GetOrigin(j)) { - QString error = "Cannot read file (too different from others "; - error += files[i].toStdString().c_str(); - QMessageBox::information(this,tr("Reading problem"),error); - IsOk = false; - break; - } - } - if (IsOk) - vector.push_back(files[i].toStdString()); - } else { - QString error = "Cannot read file info for "; - error += files[i].toStdString().c_str(); - error += "\n"; - error += "Maybe you're trying to open an image in an unsupported format?\n"; - QMessageBox::information(this,tr("Reading problem"),error); - } - } + for (int i = 0; i < files.size(); i++) + vector.push_back(files[i].toStdString()); sort(vector.begin(),vector.end()); if (vector.size() > 1) LoadImages(vector, vvImageReader::MERGEDWITHTIME); @@ -928,7 +886,7 @@ void vvMainWindow::LoadImages(std::vector files, vvImageReader::Loa DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton); //set the id of the image - QString id = files[i].c_str() + QString::number(mSlicerManagers.size()-1); + QString id = QDir::current().absoluteFilePath(files[i].c_str()) + QString::number(mSlicerManagers.size()-1); item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str()); mSlicerManagers.back()->SetId(id.toStdString()); @@ -1100,21 +1058,28 @@ void vvMainWindow::ImageInfoChanged() //read image header int NPixel = 1; + int tSlice = 0; vvImage::Pointer imageSelected; if (DataTree->topLevelItem(index) == DataTree->selectedItems()[0]) { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetTSlice(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "vector") { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetVF(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetOverlayTSlice(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "overlay") { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetOverlay(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetOverlayTSlice(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "fusion") { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetFusion(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetFusionTSlice(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "contour") { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetTSlice(); } else { imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); + tSlice = mSlicerManagers[index]->GetSlicer(0)->GetTSlice(); } dimension = imageSelected->GetNumberOfDimensions(); @@ -1142,7 +1107,7 @@ void vvMainWindow::ImageInfoChanged() infoPanel->setOrigin(GetVectorDoubleAsString(origin)); infoPanel->setSpacing(GetVectorDoubleAsString(inputSpacing)); infoPanel->setNPixel(QString::number(NPixel)+" ("+inputSizeInBytes+")"); - transformation = imageSelected->GetTransform()[mSlicerManagers[index]->GetTSlice()]->GetMatrix(); + transformation = imageSelected->GetTransform()[tSlice]->GetMatrix(); infoPanel->setTransformation(Get4x4MatrixDoubleAsString(transformation)); landmarksPanel->SetCurrentLandmarks(mSlicerManagers[index]->GetLandmarks(), @@ -1240,6 +1205,7 @@ void vvMainWindow::ChangeViewMode() typedef struct _SIZE{ QSplitter* splitter; QList size1, size2; + int cols[3]; }SplitterSize; SplitterSize sizes[4]; sizes[0].splitter = OSplitter; @@ -1247,24 +1213,36 @@ void vvMainWindow::ChangeViewMode() sizes[0].size1.push_back(0); sizes[0].size2.push_back(1); sizes[0].size2.push_back(0); + sizes[0].cols[0] = 2; + sizes[0].cols[1] = 3; + sizes[0].cols[2] = 4; sizes[1].splitter = ESplitter; sizes[1].size1.push_back(0); sizes[1].size1.push_back(1); sizes[1].size2.push_back(1); sizes[1].size2.push_back(0); + sizes[1].cols[0] = 1; + sizes[1].cols[1] = 3; + sizes[1].cols[2] = 4; sizes[2].splitter = OSplitter; sizes[2].size1.push_back(1); sizes[2].size1.push_back(0); sizes[2].size2.push_back(0); sizes[2].size2.push_back(1); + sizes[2].cols[0] = 1; + sizes[2].cols[1] = 2; + sizes[2].cols[2] = 4; sizes[3].splitter = ESplitter; sizes[3].size1.push_back(0); sizes[3].size1.push_back(1); sizes[3].size2.push_back(0); sizes[3].size2.push_back(1); + sizes[3].cols[0] = 1; + sizes[3].cols[1] = 2; + sizes[3].cols[2] = 3; int slicer = mSlicerManagers[mCurrentPickedImageIndex]->GetSelectedSlicer(); if (viewMode == 1) { @@ -1272,9 +1250,9 @@ void vvMainWindow::ChangeViewMode() viewMode = 0; splitter_3->setSizes(sizes[slicer].size1); sizes[slicer].splitter->setSizes(sizes[slicer].size2); - DataTree->setColumnHidden(2,1); - DataTree->setColumnHidden(3,1); - DataTree->setColumnHidden(4,1); + DataTree->setColumnHidden(sizes[slicer].cols[0],1); + DataTree->setColumnHidden(sizes[slicer].cols[1],1); + DataTree->setColumnHidden(sizes[slicer].cols[2],1); } } else { QList size; @@ -1284,9 +1262,9 @@ void vvMainWindow::ChangeViewMode() size.push_back(1); splitter_3->setSizes(size); sizes[slicer].splitter->setSizes(size); - DataTree->setColumnHidden(2,0); - DataTree->setColumnHidden(3,0); - DataTree->setColumnHidden(4,0); + DataTree->setColumnHidden(sizes[slicer].cols[0],0); + DataTree->setColumnHidden(sizes[slicer].cols[1],0); + DataTree->setColumnHidden(sizes[slicer].cols[2],0); } } UpdateRenderWindows(); @@ -1528,33 +1506,28 @@ void vvMainWindow::InitDisplay() //------------------------------------------------------------------------------ void vvMainWindow::DisplaySliders(int slicer, int window) { + if(!mSlicerManagers[slicer]->GetSlicer(window)->GetRenderer()->GetDraw()) + return; + int range[2]; mSlicerManagers[slicer]->GetSlicer(window)->GetSliceRange(range); int position = mSlicerManagers[slicer]->GetSlicer(window)->GetSlice(); - - int tRange[2]; - tRange[0] = 0; - tRange[1] = mSlicerManagers[slicer]->GetSlicer(window)->GetTMax(); - int tPosition = mSlicerManagers[slicer]->GetSlicer(window)->GetMaxCurrentTSlice(); - bool showHorizontal = false; - bool showVertical = false; if (range[1]>0) - showVertical = true; - if (tRange[1]>0) - showHorizontal = true; - - if (showVertical) verticalSliders[window]->show(); else verticalSliders[window]->hide(); verticalSliders[window]->setRange(range[0],range[1]); verticalSliders[window]->setValue(position); - if (showHorizontal) + int tRange[2]; + tRange[0] = 0; + tRange[1] = mSlicerManagers[slicer]->GetSlicer(window)->GetTMax(); + if (tRange[1]>0) horizontalSliders[window]->show(); else horizontalSliders[window]->hide(); horizontalSliders[window]->setRange(tRange[0],tRange[1]); + int tPosition = mSlicerManagers[slicer]->GetSlicer(window)->GetMaxCurrentTSlice(); horizontalSliders[window]->setValue(tPosition); } //------------------------------------------------------------------------------ @@ -2143,7 +2116,18 @@ void vvMainWindow::AddFusionImage(int index, QString file) QMessageBox::information(this,tr("Problem reading Fusion !"),"File doesn't exist!"); } //------------------------------------------------------------------------------ - +//------------------------------------------------------------------------------ +void vvMainWindow::AddLandmarks(int index, QString file) +{ + if (QFile::exists(file)) + { + landmarksPanel->LoadFromFile(file.toStdString()); + landmarksPanel->SetCurrentPath(mInputPathName.toStdString()); + landmarksPanel->SetCurrentImage(mSlicerManagers[index]->GetFileName().c_str()); + } + else + QMessageBox::information(this,tr("Problem reading Landmarks !"),"File doesn't exist!"); +} //------------------------------------------------------------------------------ void vvMainWindow::OpenField() @@ -2161,7 +2145,11 @@ void vvMainWindow::OpenField() QString Extensions = "Images ( *.mhd)"; Extensions += ";;Images ( *.mha)"; - Extensions += ";;Images ( *.vf)"; + Extensions += ";;VF Images ( *.vf)"; + Extensions += ";;nii Images ( *.nii)"; + Extensions += ";;nrrd Images ( *.nrrd)"; + Extensions += ";;nhdr Images ( *.nhdr)"; + Extensions += ";;All Files (*)"; QString file = QFileDialog::getOpenFileName(this,tr("Load deformation field"),mInputPathName,Extensions); if (!file.isEmpty()) AddField(file,index); @@ -2473,8 +2461,14 @@ void vvMainWindow::LinkAllImages() } //------------------------------------------------------------------------------ -void vvMainWindow::AddLink(QString image1,QString image2) +void vvMainWindow::AddLink(QString image1,QString image2,bool fromPanel) { + if (!fromPanel) { + // delegate to linkPanel if call came from elsewhere... + linkPanel->addLinkFromIds(image1, image2); + return; + } + unsigned int sm1 = 0; unsigned int sm2 = 0; @@ -3049,6 +3043,12 @@ void vvMainWindow::ShowLastImage() //------------------------------------------------------------------------------ void vvMainWindow::UpdateRenderWindows() { + for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { + mSlicerManagers[i]->GetSlicer(0)->UpdateLandmarks(); + mSlicerManagers[i]->GetSlicer(1)->UpdateLandmarks(); + mSlicerManagers[i]->GetSlicer(2)->UpdateLandmarks(); + mSlicerManagers[i]->GetSlicer(3)->UpdateLandmarks(); + } if (NOViewWidget->GetRenderWindow()) NOViewWidget->GetRenderWindow()->Render(); if (NEViewWidget->GetRenderWindow()) NEViewWidget->GetRenderWindow()->Render(); if (SOViewWidget->GetRenderWindow()) SOViewWidget->GetRenderWindow()->Render(); @@ -3135,7 +3135,7 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton); //set the id of the image - QString id = slicer_manager->GetFileName().c_str() + QString::number(mSlicerManagers.size()-1); + QString id = QDir::current().absoluteFilePath(slicer_manager->GetFileName().c_str()) + QString::number(mSlicerManagers.size()-1); item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str()); mSlicerManagers.back()->SetId(id.toStdString());