X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=vv%2FvvMainWindow.cxx;h=a15a11440143ddb4b71c99918d12d762c7fea5e4;hb=503bccefcb47422eb5f6383c4d507fdc56d77ea1;hp=89a888456e6a37a38fb53c4efcd4ac5b638a2286;hpb=91342e828163ad49dbed39426ed4521dbfc64629;p=clitk.git diff --git a/vv/vvMainWindow.cxx b/vv/vvMainWindow.cxx index 89a8884..a15a114 100644 --- a/vv/vvMainWindow.cxx +++ b/vv/vvMainWindow.cxx @@ -3,7 +3,7 @@ Authors belong to: - University of LYON http://www.universite-lyon.fr/ - - Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr + - Léon Bérard cancer center http://www.centreleonberard.fr - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr This software is distributed WITHOUT ANY WARRANTY; without even @@ -14,17 +14,20 @@ - BSD See included LICENSE.txt file - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html -======================================================================-====*/ +===========================================================================**/ #include #include #include #include #include "QTreePushButton.h" +#include +#include // VV include #include "vvMainWindow.h" #include "vvHelpDialog.h" +#include "vvRegisterForm.h" #include "vvDocumentation.h" #include "vvProgressDialog.h" #include "vvQDicomSeriesSelector.h" @@ -38,38 +41,46 @@ #include "vvDeformationDialog.h" #include "vvImageWarp.h" #include "vvUtils.h" -#include "vvMaximumIntensityProjection.h" #include "vvMidPosition.h" #include "vvMesh.h" #include "vvStructSelector.h" #include "vvMeshReader.h" -#include "vvConstants.h" #include "clitkConfiguration.h" // ITK include -#include "itkImage.h" -#include "itkImageFileReader.h" -#include "itkByteSwapper.h" -#include "itkCommand.h" -#include "itkNumericSeriesFileNames.h" +#include +#include +#include +#include +#include // VTK include -#include "vtkImageData.h" -#include "vtkImageActor.h" -#include "vtkCornerAnnotation.h" -#include "vtkRenderWindow.h" -#include "vtkRenderWindowInteractor.h" -#include "vtkRenderer.h" -#include "vtkRendererCollection.h" -#include "vtkWindowToImageFilter.h" -#include "vtkBMPWriter.h" -#include "vtkTIFFWriter.h" -#include "vtkPNMWriter.h" -#include "vtkPNGWriter.h" -#include "vtkJPEGWriter.h" +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include +#ifdef VTK_USE_FFMPEG_ENCODER +# include +#endif +#ifdef VTK_USE_MPEG2_ENCODER +# include +#endif +#include +#include // Standard includes #include +#include +#include #define COLUMN_TREE 0 #define COLUMN_UL_VIEW 1 @@ -80,7 +91,7 @@ #define COLUMN_RELOAD_IMAGE 6 #define COLUMN_IMAGE_NAME 7 -#define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.hdr *.vox *.his *.xdr *.SCAN )" +#define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN )" /*Data Tree values 0,Qt::UserRole full filename @@ -105,6 +116,8 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() mMainWidget = this; mCurrentTime = -1; mCurrentSelectedImageId = ""; + mCurrentPickedImageId = ""; + mCurrentPickedImageIndex = 0; //Init the contextMenu this->setContextMenuPolicy(Qt::CustomContextMenu); @@ -225,7 +238,6 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() connect(SEHorizontalSlider,SIGNAL(valueChanged(int)),this,SLOT(SEHorizontalSliderMoved())); //connect everything - connect(actionMaximum_Intensity_Projection,SIGNAL(triggered()),this,SLOT(ComputeMIP())); connect(actionCompute_mid_position_image,SIGNAL(triggered()),this,SLOT(ComputeMidPosition())); connect(actionDeformable_Registration,SIGNAL(triggered()),this,SLOT(ComputeDeformableRegistration())); connect(actionWarp_image_with_vector_field,SIGNAL(triggered()),this,SLOT(WarpImage())); @@ -242,6 +254,7 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() connect(actionAdd_VF_to_current_Image,SIGNAL(triggered()),this,SLOT(OpenField())); connect(actionNavigation_Help,SIGNAL(triggered()),this,SLOT(ShowHelpDialog())); connect(actionDocumentation,SIGNAL(triggered()),this,SLOT(ShowDocumentation())); + connect(actionRegister_vv,SIGNAL(triggered()),this,SLOT(PopupRegisterForm())); /////////////////////////////////////////////// connect(actionSegmentation,SIGNAL(triggered()),this,SLOT(SegmentationOnCurrentImage())); @@ -268,13 +281,14 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() connect(colorMapComboBox,SIGNAL(currentIndexChanged(int)),this,SLOT(UpdateColorMap())); connect(presetComboBox,SIGNAL(currentIndexChanged(int)),this,SLOT(UpdateWindowLevel())); connect(inverseButton,SIGNAL(clicked()),this,SLOT(SwitchWindowLevel())); + connect(applyWindowLevelToAllButton,SIGNAL(clicked()),this,SLOT(ApplyWindowLevelToAllImages())); connect(this,SIGNAL(customContextMenuRequested(QPoint)),this,SLOT(ShowContextMenu(QPoint))); connect(linkPanel,SIGNAL(addLink(QString,QString)),this,SLOT(AddLink(QString,QString))); connect(linkPanel,SIGNAL(removeLink(QString,QString)),this,SLOT(RemoveLink(QString,QString))); - connect(overlayPanel,SIGNAL(VFPropertyUpdated(int,int,int,int)),this,SLOT(SetVFProperty(int,int,int,int))); + connect(overlayPanel,SIGNAL(VFPropertyUpdated(int,int,int,int,double,double,double)),this,SLOT(SetVFProperty(int,int,int,int,double,double,double))); connect(overlayPanel,SIGNAL(OverlayPropertyUpdated(int)),this,SLOT(SetOverlayProperty(int))); connect(overlayPanel,SIGNAL(FusionPropertyUpdated(int,int,double,double)), this,SLOT(SetFusionProperty(int,int,double,double))); @@ -298,37 +312,66 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() //Recently opened files std::list recent_files = GetRecentlyOpenedImages(); + recentlyOpenedFilesMenu=NULL; if ( !recent_files.empty() ) { - QMenu * rmenu = new QMenu("Recently opened files..."); - rmenu->setIcon(QIcon(QString::fromUtf8(":/common/icons/open.png"))); - menuFile->insertMenu(actionOpen_Image_With_Time,rmenu); - menuFile->insertSeparator(actionOpen_Image_With_Time); - for (std::list::iterator i = recent_files.begin(); i!=recent_files.end(); i++) { - QAction* current=new QAction(QIcon(QString::fromUtf8(":/common/icons/open.png")), - (*i).c_str(),this); - rmenu->addAction(current); - connect(current,SIGNAL(triggered()),this,SLOT(OpenRecentImage())); - } + createRecentlyOpenedFilesMenu(); + updateRecentlyOpenedFilesMenu(recent_files); } // Adding all new tools (insertion in the menu) vvToolManager::GetInstance()->InsertToolsInMenu(this); + vvToolManager::GetInstance()->EnableToolsInMenu(this, false); if (!CLITK_EXPERIMENTAL) menuExperimental->menuAction()->setVisible(false); + + + QTimer * timerMemory = new QTimer(this); + //timerMemory->setInterval(5); + connect(timerMemory, SIGNAL(timeout()), this, SLOT(UpdateMemoryUsage())); + timerMemory->start(2000); +} +//------------------------------------------------------------------------------ +void vvMainWindow::show() +{ + vvMainWindowBase::show(); + PopupRegisterForm(true); +} +//------------------------------------------------------------------------------ +void vvMainWindow::UpdateMemoryUsage() +{ + // clitk::PrintMemory(true); + if (clitk::GetMemoryUsageInMb() == 0) infoPanel->setMemoryInMb("NA"); + else infoPanel->setMemoryInMb(QString::number(clitk::GetMemoryUsageInMb())+" MiB"); } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvMainWindow::ComputeMIP() +void vvMainWindow::createRecentlyOpenedFilesMenu() { - vvMaximumIntensityProjection mip; - vvSlicerManager* selected_slicer = mSlicerManagers[GetSlicerIndexFromItem(DataTree->selectedItems()[0])]; - QFileInfo info(selected_slicer->GetFileName().c_str()); - mip.Compute(selected_slicer); - if (!mip.error) - AddImage(mip.GetOutput(),info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_mip.mhd"); + recentlyOpenedFilesMenu = new QMenu("Recently opened files..."); + recentlyOpenedFilesMenu->setIcon(QIcon(QString::fromUtf8(":/common/icons/open.png"))); + menuFile->insertMenu(actionOpen_Image_With_Time,recentlyOpenedFilesMenu); + menuFile->insertSeparator(actionOpen_Image_With_Time); +} +//------------------------------------------------------------------------------ + + +//------------------------------------------------------------------------------ + +void vvMainWindow::updateRecentlyOpenedFilesMenu(const std::list &recent_files) +{ + if(recentlyOpenedFilesMenu==NULL) { + createRecentlyOpenedFilesMenu(); + } else { + recentlyOpenedFilesMenu->clear(); + } + for (std::list::const_iterator i = recent_files.begin(); i!=recent_files.end(); i++) { + QAction* current=new QAction(QIcon(QString::fromUtf8(":/common/icons/open.png")), i->c_str(),this); + recentlyOpenedFilesMenu->addAction(current); + connect(current,SIGNAL(triggered()),this,SLOT(OpenRecentImage())); + } } //------------------------------------------------------------------------------ @@ -592,7 +635,7 @@ void vvMainWindow::MergeImages() } } if (vector.size() > 0) - LoadImages(vector, MERGED); + LoadImages(vector, vvImageReader::MERGED); } //------------------------------------------------------------------------------ @@ -609,7 +652,7 @@ void vvMainWindow::SliceImages() std::vector vector; for (int i = 0; i < files.size(); i++) vector.push_back(files[i].toStdString()); - LoadImages(vector, SLICED); + LoadImages(vector, vvImageReader::SLICED); } //------------------------------------------------------------------------------ @@ -671,7 +714,7 @@ void vvMainWindow::MergeImagesWithTime() } sort(vector.begin(),vector.end()); if (vector.size() > 1) - LoadImages(vector, MERGEDWITHTIME); + LoadImages(vector, vvImageReader::MERGEDWITHTIME); else QMessageBox::warning(this,tr("Reading problem"),"You need to select at least two images to merge images with time.\nIf you only want to open one image, please use the \"Open Image\" function."); } @@ -686,7 +729,7 @@ void vvMainWindow::OpenDicom() std::cout << "dicomSeriesSelector " << std::endl; if (dicomSeriesSelector->exec() == QDialog::Accepted) { files = *(dicomSeriesSelector->GetFilenames()); - LoadImages(files,DICOM); + LoadImages(files, vvImageReader::DICOM); } } //------------------------------------------------------------------------------ @@ -704,7 +747,7 @@ void vvMainWindow::OpenImages() std::vector vector; for (int i = 0; i < files.size(); i++) vector.push_back(files[i].toStdString()); - LoadImages(vector, IMAGE); + LoadImages(vector, vvImageReader::IMAGE); } //------------------------------------------------------------------------------ void vvMainWindow::OpenRecentImage() @@ -713,7 +756,7 @@ void vvMainWindow::OpenRecentImage() std::vector images; images.push_back(caller->text().toStdString()); mInputPathName = itksys::SystemTools::GetFilenamePath(images[0]).c_str(); - LoadImages(images,IMAGE); + LoadImages(images, vvImageReader::IMAGE); } //------------------------------------------------------------------------------ @@ -732,17 +775,17 @@ void vvMainWindow::OpenImageWithTime() for (int i = 0; i < files.size(); i++) { vector.push_back(files[i].toStdString()); } - LoadImages(vector, IMAGEWITHTIME); + LoadImages(vector, vvImageReader::IMAGEWITHTIME); } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvMainWindow::LoadImages(std::vector files, LoadedImageType filetype) +void vvMainWindow::LoadImages(std::vector files, vvImageReader::LoadedImageType filetype) { //Separate the way to open images and dicoms int fileSize; - if (filetype == IMAGE || filetype == IMAGEWITHTIME) + if (filetype == vvImageReader::IMAGE || filetype == vvImageReader::IMAGEWITHTIME) fileSize = files.size(); else fileSize = 1; @@ -751,7 +794,7 @@ void vvMainWindow::LoadImages(std::vector files, LoadedImageType fi std::vector nSlices; nSlices.resize(files.size()); std::fill(nSlices.begin(), nSlices.end(), 1); - if (filetype == SLICED) { + if (filetype == vvImageReader::SLICED) { for (int i = 0; i < fileSize; i++) { itk::ImageIOBase::Pointer header = clitk::readImageHeader(files[i]); QApplication::setOverrideCursor(QCursor(Qt::WaitCursor)); @@ -772,12 +815,13 @@ void vvMainWindow::LoadImages(std::vector files, LoadedImageType fi nSlices[i] = header->GetDimensions( header->GetNumberOfDimensions()-1 ); } } - + //Only add to the list of recently opened files when a single file is opened, //to avoid polluting the list of recently opened files if (files.size() == 1) { QFileInfo finfo=tr(files[0].c_str()); AddToRecentlyOpenedImages(finfo.absoluteFilePath().toStdString()); + updateRecentlyOpenedFilesMenu(GetRecentlyOpenedImages()); } //init the progress events QApplication::setOverrideCursor(QCursor(Qt::WaitCursor)); @@ -792,7 +836,7 @@ void vvMainWindow::LoadImages(std::vector files, LoadedImageType fi progress.SetProgress(i,fileSize); qApp->processEvents(); - for (int j = 0; j < nSlices[i]; j++) { + for (unsigned int j = 0; j < nSlices[i]; j++) { //read the image and put it in mSlicerManagers vvSlicerManager* imageManager = new vvSlicerManager(4); qApp->processEvents(); @@ -802,12 +846,12 @@ void vvMainWindow::LoadImages(std::vector files, LoadedImageType fi // Change filename if an image with the same already exist int number = GetImageDuplicateFilenameNumber(files[i] + std::string("_slice")); - if (filetype == IMAGE || filetype == IMAGEWITHTIME || filetype == SLICED) + if (filetype == vvImageReader::IMAGE || filetype == vvImageReader::IMAGEWITHTIME || filetype == vvImageReader::SLICED) SetImageSucceed = imageManager->SetImage(files[i],filetype, number, j); else { SetImageSucceed = imageManager->SetImages(files,filetype, number); } - if (SetImageSucceed == false) { + if (!SetImageSucceed) { QApplication::restoreOverrideCursor(); QString error = "Cannot open file \n"; error += imageManager->GetLastError().c_str(); @@ -821,6 +865,8 @@ void vvMainWindow::LoadImages(std::vector files, LoadedImageType fi item->setData(0,Qt::UserRole,files[i].c_str()); QFileInfo fileinfo(imageManager->GetFileName().c_str()); //Do not show the path item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName()); + item->setData(1,Qt::UserRole,tr("image")); + item->setToolTip(COLUMN_IMAGE_NAME, imageManager->GetListOfAbsoluteFilePathInOneString("image").c_str()); qApp->processEvents(); //Create the buttons for reload and close @@ -854,6 +900,8 @@ void vvMainWindow::LoadImages(std::vector files, LoadedImageType fi connect(mSlicerManagers.back(), SIGNAL(currentImageChanged(std::string)), this,SLOT(CurrentImageChanged(std::string))); + connect(mSlicerManagers.back(), SIGNAL(currentPickedImageChanged(std::string)), + this, SLOT(CurrentPickedImageChanged(std::string))); connect(mSlicerManagers.back(), SIGNAL(UpdatePosition(int, double, double, double, double, double, double, double)), this,SLOT(MousePositionChanged(int,double, double, double, double, double, double, double))); connect(mSlicerManagers.back(), SIGNAL(UpdateVector(int, double, double, double, double)), @@ -874,14 +922,14 @@ void vvMainWindow::LoadImages(std::vector files, LoadedImageType fi this,SLOT(UpdateSliceRange(int,int,int,int,int))); connect(mSlicerManagers.back(), SIGNAL(UpdateLinkManager(std::string,int,double,double,double,int)), this,SLOT(UpdateLinkManager(std::string,int,double,double,double,int))); - connect(mSlicerManagers.back(), SIGNAL(UpdateLinkedNavigation(std::string,vvSlicerManager*)), - this,SLOT(UpdateLinkedNavigation(std::string,vvSlicerManager*))); + connect(mSlicerManagers.back(), SIGNAL(UpdateLinkedNavigation(std::string,vvSlicerManager*,vvSlicer*)), + this,SLOT(UpdateLinkedNavigation(std::string,vvSlicerManager*,vvSlicer*))); connect(mSlicerManagers.back(), SIGNAL(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)), this,SLOT(ChangeImageWithIndexOffset(vvSlicerManager*,int,int))); connect(mSlicerManagers.back(),SIGNAL(LandmarkAdded()),landmarksPanel,SLOT(AddPoint())); InitSlicers(); + numberofsuccesulreads++; } - numberofsuccesulreads++; } } if (numberofsuccesulreads) { @@ -896,8 +944,6 @@ void vvMainWindow::LoadImages(std::vector files, LoadedImageType fi // Try to guess default WindowLevel double range[2]; mSlicerManagers.back()->GetImage()->GetFirstVTKImageData()->GetScalarRange(range); - // DD(range[0]); - // DD(range[1]); if ((range[0] == 0) && (range[1] == 1)) { presetComboBox->setCurrentIndex(5);// binary } else { @@ -925,9 +971,6 @@ void vvMainWindow::UpdateTree() //------------------------------------------------------------------------------ void vvMainWindow::CurrentImageChanged(std::string id) { - // DD("CurrentImageChanged"); -// DD(id); -// DD(mCurrentSelectedImageId); if (id == mCurrentSelectedImageId) return; // Do nothing int selected = 0; for (int i = 0; i < DataTree->topLevelItemCount(); i++) { @@ -941,12 +984,32 @@ void vvMainWindow::CurrentImageChanged(std::string id) } DataTree->topLevelItem(selected)->setSelected(1); - // DD(mSlicerManagers[selected]->GetFileName()); mCurrentSelectedImageId = id; emit SelectedImageHasChanged(mSlicerManagers[selected]); } //------------------------------------------------------------------------------ +//------------------------------------------------------------------------------ +void vvMainWindow::CurrentPickedImageChanged(std::string id) +{ + if (id == mCurrentPickedImageId) return; // Do nothing + int selected = 0; + for (int i = 0; i < DataTree->topLevelItemCount(); i++) { + if (DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString().toStdString() == id) { + selected = i; + } else { + DataTree->topLevelItem(i)->setSelected(0); + } + for (int child = 0; child < DataTree->topLevelItem(i)->childCount(); child++) + DataTree->topLevelItem(i)->child(child)->setSelected(0); + + } + DataTree->topLevelItem(selected)->setSelected(1); + mCurrentPickedImageId = id; + mCurrentPickedImageIndex = selected; +} +//------------------------------------------------------------------------------ + //------------------------------------------------------------------------------ void vvMainWindow::ImageInfoChanged() { @@ -959,6 +1022,7 @@ void vvMainWindow::ImageInfoChanged() actionNorth_West_Window->setEnabled(1); actionSouth_East_Window->setEnabled(1); actionSouth_West_Window->setEnabled(1); + vvToolManager::GetInstance()->EnableToolsInMenu(this, true); inverseButton->setEnabled(1); goToCursorPushButton->setEnabled(1); @@ -979,6 +1043,7 @@ void vvMainWindow::ImageInfoChanged() std::vector inputSpacing; std::vector inputSize; std::vector sizeMM; + vtkSmartPointer transformation; int dimension=0; QString pixelType; QString inputSizeInBytes; @@ -997,72 +1062,38 @@ void vvMainWindow::ImageInfoChanged() //read image header int NPixel = 1; + vvImage::Pointer imageSelected; if (DataTree->topLevelItem(index) == DataTree->selectedItems()[0]) { - vvImage::Pointer imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); - dimension = imageSelected->GetNumberOfDimensions(); - origin.resize(dimension); - inputSpacing.resize(dimension); - inputSize.resize(dimension); - sizeMM.resize(dimension); - pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsITKString().c_str(); - for (int i = 0; i < dimension; i++) { - origin[i] = imageSelected->GetOrigin()[i]; - inputSpacing[i] = imageSelected->GetSpacing()[i]; - inputSize[i] = imageSelected->GetSize()[i]; - sizeMM[i] = inputSize[i]*inputSpacing[i]; - NPixel *= inputSize[i]; - } - inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000); + imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "vector") { - vvImage::Pointer imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetVF(); - dimension = imageSelected->GetNumberOfDimensions(); - origin.resize(dimension); - inputSpacing.resize(dimension); - inputSize.resize(dimension); - sizeMM.resize(dimension); - pixelType = mSlicerManagers[index]->GetVF()->GetScalarTypeAsITKString().c_str(); - for (int i = 0; i < dimension; i++) { - origin[i] = imageSelected->GetOrigin()[i]; - inputSpacing[i] = imageSelected->GetSpacing()[i]; - inputSize[i] = imageSelected->GetSize()[i]; - sizeMM[i] = inputSize[i]*inputSpacing[i]; - NPixel *= inputSize[i]; - } - inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000); + imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetVF(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "overlay") { - vvImage::Pointer imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetOverlay(); - dimension = imageSelected->GetNumberOfDimensions(); - origin.resize(dimension); - inputSpacing.resize(dimension); - inputSize.resize(dimension); - sizeMM.resize(dimension); - pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsITKString().c_str(); - for (int i = 0; i < dimension; i++) { - origin[i] = imageSelected->GetOrigin()[i]; - inputSpacing[i] = imageSelected->GetSpacing()[i]; - inputSize[i] = imageSelected->GetSize()[i]; - sizeMM[i] = inputSize[i]*inputSpacing[i]; - NPixel *= inputSize[i]; - } - inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000); + imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetOverlay(); } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "fusion") { - vvImage::Pointer imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetFusion(); - dimension = imageSelected->GetNumberOfDimensions(); - origin.resize(dimension); - inputSpacing.resize(dimension); - inputSize.resize(dimension); - sizeMM.resize(dimension); - pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsITKString().c_str(); - for (int i = 0; i < dimension; i++) { - origin[i] = imageSelected->GetOrigin()[i]; - inputSpacing[i] = imageSelected->GetSpacing()[i]; - inputSize[i] = imageSelected->GetSize()[i]; - sizeMM[i] = inputSize[i]*inputSpacing[i]; - NPixel *= inputSize[i]; - } - inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000); + imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetFusion(); + } + else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "contour") { + imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); + } + else { + imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage(); } + dimension = imageSelected->GetNumberOfDimensions(); + origin.resize(dimension); + inputSpacing.resize(dimension); + inputSize.resize(dimension); + sizeMM.resize(dimension); + pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsITKString().c_str(); + for (int i = 0; i < dimension; i++) { + origin[i] = imageSelected->GetOrigin()[i]; + inputSpacing[i] = imageSelected->GetSpacing()[i]; + inputSize[i] = imageSelected->GetSize()[i]; + sizeMM[i] = inputSize[i]*inputSpacing[i]; + NPixel *= inputSize[i]; + } + inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000); + QString dim = QString::number(dimension) + " ("; dim += pixelType + ")"; @@ -1073,6 +1104,8 @@ void vvMainWindow::ImageInfoChanged() infoPanel->setOrigin(GetVectorDoubleAsString(origin)); infoPanel->setSpacing(GetVectorDoubleAsString(inputSpacing)); infoPanel->setNPixel(QString::number(NPixel)+" ("+inputSizeInBytes+")"); + transformation = imageSelected->GetTransform()->GetMatrix(); + infoPanel->setTransformation(Get4x4MatrixDoubleAsString(transformation)); landmarksPanel->SetCurrentLandmarks(mSlicerManagers[index]->GetLandmarks(), mSlicerManagers[index]->GetSlicer(0)->GetImage()->GetVTKImages().size()); @@ -1088,8 +1121,6 @@ void vvMainWindow::ImageInfoChanged() } windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow()); levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel()); - // DD(mSlicerManagers[index]->GetColorMap()); - // DD(mSlicerManagers[index]->GetPreset()); presetComboBox->setCurrentIndex(mSlicerManagers[index]->GetPreset()); colorMapComboBox->setCurrentIndex(mSlicerManagers[index]->GetColorMap()); @@ -1153,6 +1184,23 @@ void vvMainWindow::ShowDocumentation() { documentation->show(); } +//------------------------------------------------------------------------------ + +//------------------------------------------------------------------------------ +void vvMainWindow::PopupRegisterForm(bool checkCanPush) +{ + vvRegisterForm* registerForm = new vvRegisterForm(QUrl("http://www.creatis.insa-lyon.fr/~dsarrut/vvregister/write.php"), getVVSettingsPath(), getSettingsOptionFormat()); + if(!checkCanPush) { + registerForm->show(); + } else { + if(registerForm->canPush()) { + registerForm->show(); + registerForm->acquitPushed();//too bad if there is not internet connection anymore. + } + } +} +//------------------------------------------------------------------------------ + //------------------------------------------------------------------------------ void vvMainWindow::ShowHelpDialog() { @@ -1163,41 +1211,37 @@ void vvMainWindow::ShowHelpDialog() //------------------------------------------------------------------------------ void vvMainWindow::ChangeViewMode() { - QListIterator it0(splitter_3->sizes()); - QListIterator it1(splitter_3->sizes()); - int max0 = 0; - int max1 = 1; - while (it0.hasNext()) { - max0 += it0.next(); - } - while (it1.hasNext()) { - max1 += it1.next(); - } - QList size0; - QList size1; + QList size; if (viewMode == 1) { viewMode = 0; - size0.push_back(max0); - size0.push_back(0); - size1.push_back(max1); - size1.push_back(0); - splitter_3->setSizes(size0); - OSplitter->setSizes(size1); + size.push_back(1); + size.push_back(0); + splitter_3->setSizes(size); + OSplitter->setSizes(size); DataTree->setColumnHidden(2,1); DataTree->setColumnHidden(3,1); DataTree->setColumnHidden(4,1); } else { viewMode = 1; - size0.push_back(int(max0/2)); - size0.push_back(int(max0/2)); - size1.push_back(int(max1/2)); - size1.push_back(int(max1/2)); - splitter_3->setSizes(size0); - OSplitter->setSizes(size1); + size.push_back(1); + size.push_back(1); + splitter_3->setSizes(size); + OSplitter->setSizes(size); DataTree->setColumnHidden(2,0); DataTree->setColumnHidden(3,0); DataTree->setColumnHidden(4,0); } + UpdateRenderWindows(); + /* + ** I don't know why but for both resized QVTKWidget we also need to render + ** the associated Slicer to redraw crosses. + */ + for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { + if (DataTree->topLevelItem(i)->data(COLUMN_UL_VIEW,Qt::CheckStateRole).toInt() > 1) + mSlicerManagers[i]->GetSlicer(0)->Render(); + if (DataTree->topLevelItem(i)->data(COLUMN_DL_VIEW,Qt::CheckStateRole).toInt() > 1) + mSlicerManagers[i]->GetSlicer(2)->Render(); + } } //------------------------------------------------------------------------------ @@ -1223,6 +1267,29 @@ QString vvMainWindow::GetSizeInBytes(unsigned long size) } //------------------------------------------------------------------------------ +//------------------------------------------------------------------------------ +QString vvMainWindow::Get4x4MatrixDoubleAsString(vtkSmartPointer matrix) +{ + std::ostringstream strmatrix; + + for (unsigned int i = 0; i < 4; i++) { + for (unsigned int j = 0; j < 4; j++) { + strmatrix.flags(ios::showpos); + strmatrix.width(10); + strmatrix.precision(3); + strmatrix.setf(ios::fixed,ios::floatfield); + strmatrix.fill(' '); + strmatrix << std::left << matrix->GetElement(i, j); + //strmatrix.width(10); + strmatrix << " "; + } + strmatrix << std::endl; + } + QString result = strmatrix.str().c_str(); + return result; +} +//------------------------------------------------------------------------------ + //------------------------------------------------------------------------------ QString vvMainWindow::GetVectorDoubleAsString(std::vector vectorDouble) { @@ -1274,74 +1341,71 @@ QTreeWidgetItem* vvMainWindow::GetItemFromSlicerManager(vvSlicerManager* sm) //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvMainWindow::DisplayChanged(QTreeWidgetItem *clicked_item, int column) +void vvMainWindow::DisplayChanged(QTreeWidgetItem *clickedItem, int column) { - int index = GetSlicerIndexFromItem(clicked_item); if ( column >= COLUMN_CLOSE_IMAGE || column <= 0) return; + + // Get parent information (might be the same item) + int slicerManagerIndex = GetSlicerIndexFromItem(clickedItem); + QTreeWidgetItem* clickedParentItem = DataTree->topLevelItem(slicerManagerIndex); + vvSlicer* clickedSlicer = mSlicerManagers[slicerManagerIndex]->GetSlicer(column-1); + + // Go over the complete item tree (only 2 levels, parents and children) for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { - //Trick to avoid redoing twice the job for a key (sr) - mSlicerManagers[i]->GetSlicer(column-1)->GetRenderWindow()-> GetInteractor()->SetKeySym("Crap"); - - QTreeWidgetItem* current_row=DataTree->topLevelItem(i); - if (DataTree->topLevelItem(index) == current_row) { - vvSlicer* clicked_slicer=mSlicerManagers[i]->GetSlicer(column-1); - if (current_row == clicked_item) { - //If we just activated a slicer - if (current_row->data(column,Qt::CheckStateRole).toInt() > 0) { - mSlicerManagers[i]->UpdateSlicer(column-1,clicked_item->data(column,Qt::CheckStateRole).toInt()); - mSlicerManagers[i]->UpdateInfoOnCursorPosition(column-1); - DisplaySliders(i,column-1); - std::map overlay_counts; - for (int child = 0; child < current_row->childCount(); child++) { - std::string overlay_type = - current_row->child(child)->data(1,Qt::UserRole).toString().toStdString(); - overlay_counts[overlay_type]++; - current_row->child(child)->setData(column,Qt::CheckStateRole, - current_row->data(column,Qt::CheckStateRole)); - clicked_slicer->SetActorVisibility(overlay_type,overlay_counts[overlay_type]-1,true); - } - } else { //We don't allow simply desactivating a slicer - clicked_item->setData(column,Qt::CheckStateRole,2); - return; - } + // Trick to avoid redoing twice the job for a key (sr) + mSlicerManagers[i]->GetSlicer(column-1)->GetRenderWindow()->GetInteractor()->SetKeySym("Crap"); + + QTreeWidgetItem* currentParentItem = DataTree->topLevelItem(i); + if(currentParentItem != clickedParentItem) { + // Not the branch of the clicked item, uncheck all + + // Parent + currentParentItem->setData(column,Qt::CheckStateRole, 0); + mSlicerManagers[i]->UpdateSlicer(column-1, false); + + // Children + for (int iChild = 0; iChild < currentParentItem->childCount(); iChild++) { + currentParentItem->child(iChild)->setData(column,Qt::CheckStateRole, 0); } - //if we clicked on the vector(or overlay) and not the image - else { - if (clicked_item->data(column,Qt::CheckStateRole).toInt()) { - current_row->setData(column,Qt::CheckStateRole,2); - mSlicerManagers[i]->UpdateSlicer(column-1,2); - mSlicerManagers[i]->UpdateInfoOnCursorPosition(column-1); - DisplaySliders(i,column-1); - } - int vis = clicked_item->data(column,Qt::CheckStateRole).toInt(); - std::string overlay_type = clicked_item->data(1,Qt::UserRole).toString().toStdString(); - int overlay_index=0; - for (int child = 0; child < current_row->childCount(); child++) { - if (current_row->child(child)->data(1,Qt::UserRole).toString().toStdString() == overlay_type) - overlay_index++; - if (current_row->child(child) == clicked_item) break; - } - clicked_slicer->SetActorVisibility( - clicked_item->data(1,Qt::UserRole).toString().toStdString(), overlay_index-1,vis); + } + else { + // Branch of the clicked one: get check status from actor visibility in slicer + // and toggle the clicked one + + // Parent + bool vis = clickedSlicer->GetActorVisibility("image", 0); + bool draw = clickedSlicer->GetRenderer()->GetDraw(); + + // Update slicer (after getting visibility) + mSlicerManagers[slicerManagerIndex]->UpdateSlicer(column-1, true); + mSlicerManagers[slicerManagerIndex]->UpdateInfoOnCursorPosition(column-1); + DisplaySliders(slicerManagerIndex, column-1); + if(clickedParentItem == clickedItem) { + // Toggle + vis = !draw || !vis; } - } else if (current_row->data(column,Qt::CheckStateRole).toInt() > 0) { - current_row->setData(column,Qt::CheckStateRole,0); - mSlicerManagers[i]->UpdateSlicer(column-1,0); - std::map overlay_counts; - for (int child = 0; child < current_row->childCount(); child++) { - std::string overlay_type = - current_row->child(child)->data(1,Qt::UserRole).toString().toStdString(); - overlay_counts[overlay_type]++; - current_row->child(child)->setData(column,Qt::CheckStateRole,0); - vvSlicer * current_slicer=mSlicerManagers[i]->GetSlicer(column-1); - current_slicer->SetActorVisibility(overlay_type,overlay_counts[overlay_type]-1,false); + clickedSlicer->SetActorVisibility("image", 0, vis); + clickedParentItem->setData(column, Qt::CheckStateRole, vis?2:0); + + // Children + std::map actorTypeCounts; + for (int iChild = 0; iChild < clickedParentItem->childCount(); iChild++) { + QTreeWidgetItem* currentChildItem = clickedParentItem->child(iChild); + std::string actorType = currentChildItem->data(1,Qt::UserRole).toString().toStdString(); + vis = clickedSlicer->GetActorVisibility(actorType, actorTypeCounts[actorType]); + if(currentChildItem == clickedItem) { + // Toggle or force visibility if it was not on this branch so far + vis = !draw || !vis; + clickedSlicer->SetActorVisibility(actorType, actorTypeCounts[actorType], vis); + } + currentChildItem->setData(column, Qt::CheckStateRole, vis?2:0); + actorTypeCounts[actorType]++; } } - //mSlicerManagers[i]->SetColorMap(-1); - mSlicerManagers[i]->SetColorMap(); } - mSlicerManagers[index]->GetSlicer(column-1)->Render(); + + clickedSlicer->Render(); } //------------------------------------------------------------------------------ @@ -1407,12 +1471,12 @@ void vvMainWindow::DisplaySliders(int slicer, int window) bool showVertical = false; if (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 3 || (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 2 - && mSlicerManagers[slicer]->GetType() != IMAGEWITHTIME - && mSlicerManagers[slicer]->GetType() != MERGEDWITHTIME)) + && mSlicerManagers[slicer]->GetType() != vvImageReader::IMAGEWITHTIME + && mSlicerManagers[slicer]->GetType() != vvImageReader::MERGEDWITHTIME)) showVertical = true; if (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 3 - || mSlicerManagers[slicer]->GetType() == IMAGEWITHTIME - || mSlicerManagers[slicer]->GetType() == MERGEDWITHTIME) + || mSlicerManagers[slicer]->GetType() == vvImageReader::IMAGEWITHTIME + || mSlicerManagers[slicer]->GetType() == vvImageReader::MERGEDWITHTIME) showHorizontal = true; if (showVertical) @@ -1494,6 +1558,7 @@ void vvMainWindow::CloseImage(QTreeWidgetItem* item, int column) InitDisplay(); } } + ImageInfoChanged(); } //------------------------------------------------------------------------------ @@ -1511,15 +1576,18 @@ void vvMainWindow::ReloadImage(QTreeWidgetItem* item, int column) int index = GetSlicerIndexFromItem(item); QApplication::setOverrideCursor(QCursor(Qt::WaitCursor)); QString role=item->data(1,Qt::UserRole).toString(); - if ( role == "vector") + if ( role == "vector"){ mSlicerManagers[index]->ReloadVF(); - else if (role == "overlay") + } + else if (role == "overlay"){ mSlicerManagers[index]->ReloadOverlay(); - else if (role == "fusion") + } + else if (role == "fusion"){ mSlicerManagers[index]->ReloadFusion(); - else + } + else{ mSlicerManagers[index]->Reload(); - + } // Update view and info ImageInfoChanged(); mSlicerManagers[index]->Render(); @@ -1591,6 +1659,8 @@ void vvMainWindow::UpdateWindowLevel() mSlicerManagers[index]->SetColorLevel(levelSpinBox->value()); mSlicerManagers[index]->SetPreset(presetComboBox->currentIndex()); mSlicerManagers[index]->Render(); + windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow()); + levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel()); } } //------------------------------------------------------------------------------ @@ -1615,6 +1685,20 @@ void vvMainWindow::SwitchWindowLevel() } //------------------------------------------------------------------------------ +//------------------------------------------------------------------------------ +void vvMainWindow::ApplyWindowLevelToAllImages() +{ + for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { + if (mSlicerManagers[i] == NULL) + continue; + mSlicerManagers[i]->SetColorWindow(windowSpinBox->value()); + mSlicerManagers[i]->SetColorLevel(levelSpinBox->value()); + mSlicerManagers[i]->SetPreset(6); + mSlicerManagers[i]->Render(); + } +} +//------------------------------------------------------------------------------ + //------------------------------------------------------------------------------ void vvMainWindow::UpdateLinkManager(std::string id, int slicer, double x, double y, double z, int temps) { @@ -1630,11 +1714,11 @@ void vvMainWindow::UpdateLinkManager(std::string id, int slicer, double x, doubl //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvMainWindow::UpdateLinkedNavigation(std::string id, vvSlicerManager * sm) +void vvMainWindow::UpdateLinkedNavigation(std::string id, vvSlicerManager * sm, vvSlicer* refSlicer) { for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { if (id == mSlicerManagers[i]->GetId()) { - mSlicerManagers[i]->UpdateLinkedNavigation(sm->GetSlicer(0)); + mSlicerManagers[i]->UpdateLinkedNavigation(refSlicer); } } } @@ -1727,13 +1811,13 @@ void vvMainWindow::AddOverlayImage(int index, QString file) QTreeWidgetItem *item = new QTreeWidgetItem(); item->setData(0,Qt::UserRole,file.toStdString().c_str()); item->setData(1,Qt::UserRole,tr("overlay")); - item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,filename.c_str()); + QFileInfo fileinfo(file); //Do not show the path + item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName()); + item->setToolTip(COLUMN_IMAGE_NAME, mSlicerManagers[index]->GetListOfAbsoluteFilePathInOneString("overlay").c_str()); qApp->processEvents(); for (int j = 1; j <= 4; j++) { item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole)); - mSlicerManagers[index]->GetSlicer(j-1)->SetActorVisibility("overlay",0, - DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole).toInt()); } //Create the buttons for reload and close @@ -1779,7 +1863,6 @@ void vvMainWindow::AddOverlayImage(int index, QString file) //------------------------------------------------------------------------------ void vvMainWindow::AddROI(int index, QString file) { - DD("AddImageAndROI"); /* // Get slice manager @@ -1800,7 +1883,7 @@ void vvMainWindow::AddROI(int index, QString file) // Create roi in new tool vvToolStructureSetManager::AddImage(mCurrentSlicerManager, roi); -*/ + */ } //------------------------------------------------------------------------------ @@ -1848,13 +1931,13 @@ void vvMainWindow::AddFusionImage(int index, QString file) QTreeWidgetItem *item = new QTreeWidgetItem(); item->setData(0,Qt::UserRole,file.toStdString().c_str()); item->setData(1,Qt::UserRole,tr("fusion")); - item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,filename.c_str()); + QFileInfo fileinfo(filename.c_str()); //Do not show the path + item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName()); + item->setToolTip(COLUMN_IMAGE_NAME, mSlicerManagers[index]->GetListOfAbsoluteFilePathInOneString("fusion").c_str()); qApp->processEvents(); for (int j = 1; j <= 4; j++) { item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole)); - mSlicerManagers[index]->GetSlicer(j-1)->SetActorVisibility("fusion",0, - DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole).toInt()); } //Create the buttons for reload and close @@ -1931,13 +2014,13 @@ void vvMainWindow::AddFieldEntry(QString filename,int index,bool from_disk) QTreeWidgetItem *item = new QTreeWidgetItem(); item->setData(0,Qt::UserRole,filename.toStdString().c_str()); item->setData(1,Qt::UserRole,tr("vector")); - item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,filename); + QFileInfo fileinfo(filename); //Do not show the path + item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName()); + item->setToolTip(COLUMN_IMAGE_NAME, mSlicerManagers[index]->GetListOfAbsoluteFilePathInOneString("vector").c_str()); qApp->processEvents(); for (int j = 1; j <= 4; j++) { item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole)); - mSlicerManagers[index]->GetSlicer(j-1)->SetActorVisibility("vector",0, - DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole).toInt()); } //Create the buttons for reload and close @@ -2025,7 +2108,7 @@ void vvMainWindow::AddField(QString file,int index) //------------------------------------------------------------------------------ -void vvMainWindow::SetVFProperty(int subsampling, int scale, int log, int width) +void vvMainWindow::SetVFProperty(int subsampling, int scale, int log, int width, double r, double g, double b) { int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]); if (mSlicerManagers[index]->GetSlicer(0)->GetVF()) { @@ -2033,6 +2116,7 @@ void vvMainWindow::SetVFProperty(int subsampling, int scale, int log, int width) mSlicerManagers[index]->GetSlicer(i)->SetVFSubSampling(subsampling); mSlicerManagers[index]->GetSlicer(i)->SetVFScale(scale); mSlicerManagers[index]->GetSlicer(i)->SetVFWidth(width); + mSlicerManagers[index]->GetSlicer(i)->SetVFColor(r,g,b); if (log > 0) mSlicerManagers[index]->GetSlicer(i)->SetVFLog(1); else @@ -2118,7 +2202,7 @@ void vvMainWindow::SaveAs() std::string action = "Saving"; vvProgressDialog progress("Saving "+fileName.toStdString()); qApp->processEvents(); - vvImageWriter *writer = new vvImageWriter; + vvImageWriter::Pointer writer = vvImageWriter::New(); writer->SetOutputFileName(fileName.toStdString()); writer->SetInput(mSlicerManagers[index]->GetImage()); writer->Update(); @@ -2146,22 +2230,34 @@ void vvMainWindow::SaveAs() //------------------------------------------------------------------------------ void vvMainWindow::AddLink(QString image1,QString image2) { + unsigned int sm1 = 0; + unsigned int sm2 = 0; + for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { if (image1.toStdString() == mSlicerManagers[i]->GetId()) { mSlicerManagers[i]->AddLink(image2.toStdString()); + sm1 = i; } if (image2.toStdString() == mSlicerManagers[i]->GetId()) { mSlicerManagers[i]->AddLink(image1.toStdString()); + sm2 = i; } } + + if (linkPanel->isLinkAll()) { + emit UpdateLinkedNavigation(mSlicerManagers[sm1]->GetId(), mSlicerManagers[mCurrentPickedImageIndex], mSlicerManagers[mCurrentPickedImageIndex]->GetSlicer(0)); + emit UpdateLinkedNavigation(mSlicerManagers[sm2]->GetId(), mSlicerManagers[mCurrentPickedImageIndex], mSlicerManagers[mCurrentPickedImageIndex]->GetSlicer(0)); + } else { + emit UpdateLinkedNavigation(mSlicerManagers[sm2]->GetId(), mSlicerManagers[sm1], mSlicerManagers[sm1]->GetSlicer(0)); + } } + //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ void vvMainWindow::RemoveLink(QString image1,QString image2) { - // DD("vvMainWindow:RemoveLink"); for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { if (image1.toStdString() == mSlicerManagers[i]->GetId()) { mSlicerManagers[i]->RemoveLink(image2.toStdString()); @@ -2182,8 +2278,8 @@ void vvMainWindow::ChangeImageWithIndexOffset(vvSlicerManager *sm, int slicer, i index = (index+offset) % mSlicerManagers.size(); QTreeWidgetItem* item = GetItemFromSlicerManager(mSlicerManagers[index]); - //CurrentImageChanged(mSlicerManagers[index]->GetId()); //select new image item->setData(slicer+1,Qt::CheckStateRole,2); //change checkbox + CurrentImageChanged(mSlicerManagers[index]->GetId()); //select new image DisplayChanged(item,slicer+1); } //------------------------------------------------------------------------------ @@ -2296,8 +2392,6 @@ void vvMainWindow::NEVerticalSliderChanged() void vvMainWindow::SOVerticalSliderChanged() { static int value=-1; - // DD(value); -// DD(SOVerticalSlider->value()); if (value == SOVerticalSlider->value()) return; else value = SOVerticalSlider->value(); //int value = SOVerticalSlider->value(); @@ -2419,11 +2513,7 @@ void vvMainWindow::UpdateSliceRange(int slicer, int min, int max, int tmin, int //------------------------------------------------------------------------------ void vvMainWindow::SaveNOScreenshot() { - vtkWindowToImageFilter *w2i = vtkWindowToImageFilter::New(); - w2i->SetInput(NOViewWidget->GetRenderWindow()); - w2i->Update(); - SaveScreenshot(w2i->GetOutput()); - w2i->Delete(); + SaveScreenshot(NOViewWidget); } //------------------------------------------------------------------------------ @@ -2431,11 +2521,7 @@ void vvMainWindow::SaveNOScreenshot() //------------------------------------------------------------------------------ void vvMainWindow::SaveNEScreenshot() { - vtkWindowToImageFilter *w2i = vtkWindowToImageFilter::New(); - w2i->SetInput(NEViewWidget->GetRenderWindow()); - w2i->Update(); - SaveScreenshot(w2i->GetOutput()); - w2i->Delete(); + SaveScreenshot(NEViewWidget); } //------------------------------------------------------------------------------ @@ -2443,11 +2529,7 @@ void vvMainWindow::SaveNEScreenshot() //------------------------------------------------------------------------------ void vvMainWindow::SaveSOScreenshot() { - vtkWindowToImageFilter *w2i = vtkWindowToImageFilter::New(); - w2i->SetInput(SOViewWidget->GetRenderWindow()); - w2i->Update(); - SaveScreenshot(w2i->GetOutput()); - w2i->Delete(); + SaveScreenshot(SOViewWidget); } //------------------------------------------------------------------------------ @@ -2455,29 +2537,38 @@ void vvMainWindow::SaveSOScreenshot() //------------------------------------------------------------------------------ void vvMainWindow::SaveSEScreenshot() { - vtkWindowToImageFilter *w2i = vtkWindowToImageFilter::New(); - w2i->SetInput(SEViewWidget->GetRenderWindow()); - w2i->Update(); - SaveScreenshot(w2i->GetOutput()); - w2i->Delete(); + SaveScreenshot(SEViewWidget); } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvMainWindow::SaveScreenshot(vtkImageData* image) +void vvMainWindow::SaveScreenshot(QVTKWidget *widget) { QString Extensions = "Images( *.png);;"; Extensions += "Images( *.jpg);;"; Extensions += "Images( *.bmp);;"; Extensions += "Images( *.tif);;"; Extensions += "Images( *.ppm)"; +#ifdef VTK_USE_FFMPEG_ENCODER + Extensions += "Images( *.avi)"; +#endif +#ifdef VTK_USE_MPEG2_ENCODER + Extensions += "Images( *.mpg)"; +#endif + + int smIndex=GetSlicerIndexFromItem(DataTree->selectedItems()[0]); QString fileName = QFileDialog::getSaveFileName(this, tr("Save As"), - itksys::SystemTools::GetFilenamePath( - mSlicerManagers[0]->GetFileName()).c_str(), + itksys::SystemTools::GetFilenamePath(mSlicerManagers[smIndex]->GetFileName()).c_str(), Extensions); + if (!fileName.isEmpty()) { + vtkSmartPointer w2i = vtkSmartPointer::New(); + w2i->SetInput(widget->GetRenderWindow()); + w2i->Update(); + vtkImageData *image = w2i->GetOutput(); + const char *ext = fileName.toStdString().c_str() + strlen(fileName.toStdString().c_str()) - 4; if (!strcmp(ext, ".bmp")) { vtkBMPWriter *bmp = vtkBMPWriter::New(); @@ -2509,11 +2600,52 @@ void vvMainWindow::SaveScreenshot(vtkImageData* image) jpg->SetFileName(fileName.toStdString().c_str()); jpg->Write(); jpg->Delete(); +#ifdef VTK_USE_FFMPEG_ENCODER + } else if (!strcmp(ext, ".avi")) { + vtkFFMPEGWriter *mpg = vtkFFMPEGWriter::New(); + mpg->SetInput(image); + mpg->SetFileName(fileName.toStdString().c_str()); + mpg->SetQuality(2); + mpg->SetRate(5); + mpg->Start(); + + vvImage * vvImg = mSlicerManagers[smIndex]->GetImage(); + int nSlice = vvImg->GetVTKImages().size(); + for(int i=0; iSetNextTSlice(0); + vtkSmartPointer w2i = vtkSmartPointer::New(); + w2i->SetInput(widget->GetRenderWindow()); + w2i->Update(); + mpg->SetInput(w2i->GetOutput()); + mpg->Write(); + } + mpg->End(); + mpg->Delete(); +#endif +#ifdef VTK_USE_MPEG2_ENCODER + } else if (!strcmp(ext, ".mpg")) { + vtkMPEG2Writer *mpg = vtkMPEG2Writer::New(); + mpg->SetInput(image); + mpg->SetFileName(fileName.toStdString().c_str()); + mpg->Start(); + + vvImage * vvImg = mSlicerManagers[smIndex]->GetImage(); + int nSlice = vvImg->GetVTKImages().size(); + for(int i=0; iSetNextTSlice(0); + vtkSmartPointer w2i = vtkSmartPointer::New(); + w2i->SetInput(widget->GetRenderWindow()); + w2i->Update(); + mpg->SetInput(w2i->GetOutput()); + mpg->Write(); + } + mpg->End(); + mpg->Delete(); +#endif } else { QMessageBox::information(this,tr("Problem saving screenshot !"),tr("Cannot save image.\nPlease set a file extension !!!")); } } - } //------------------------------------------------------------------------------ @@ -2624,7 +2756,7 @@ int vvMainWindow::GetImageDuplicateFilenameNumber(std::string filename) for(unsigned int l=0; lGetBaseFileName() == - vtksys::SystemTools::GetFilenameName(vtksys::SystemTools::GetFilenameWithoutLastExtension(filename))) { + vtksys::SystemTools::GetFilenameName(vtksys::SystemTools::GetFilenameWithoutLastExtension(filename))) { number = std::max(number, v->GetBaseFileNameNumber()+1); } } @@ -2649,7 +2781,8 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen //create an item in the tree with good settings QTreeWidgetItem *item = new QTreeWidgetItem(); item->setData(0,Qt::UserRole,slicer_manager->GetFileName().c_str());//files[i].c_str()); - item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,filename.c_str()); + item->setData(1,Qt::UserRole,tr("image")); + item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,slicer_manager->GetFileName().c_str());//filename.c_str()); qApp->processEvents(); for (int j = 1; j <= 4; j++) item->setData(j,Qt::CheckStateRole,1); @@ -2680,10 +2813,13 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str()); mSlicerManagers.back()->SetId(id.toStdString()); - linkPanel->addImage(filename, id.toStdString()); + linkPanel->addImage(slicer_manager->GetFileName().c_str()// filename + , id.toStdString()); connect(mSlicerManagers.back(), SIGNAL(currentImageChanged(std::string)), this, SLOT(CurrentImageChanged(std::string))); + connect(mSlicerManagers.back(), SIGNAL(currentPickedImageChanged(std::string)), + this, SLOT(CurrentPickedImageChanged(std::string))); connect(mSlicerManagers.back(), SIGNAL(UpdatePosition(int, double, double, double, double, double, double, double)), this, SLOT(MousePositionChanged(int,double, double, double, double, double, double, double))); connect(mSlicerManagers.back(), SIGNAL(UpdateVector(int, double, double, double, double)), @@ -2704,8 +2840,8 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen this,SLOT(UpdateSliceRange(int,int,int,int,int))); connect(mSlicerManagers.back(), SIGNAL(UpdateLinkManager(std::string,int,double,double,double,int)), this,SLOT(UpdateLinkManager(std::string,int,double,double,double,int))); - connect(mSlicerManagers.back(), SIGNAL(UpdateLinkedNavigation(std::string,vvSlicerManager*)), - this,SLOT(UpdateLinkedNavigation(std::string,vvSlicerManager*))); + connect(mSlicerManagers.back(), SIGNAL(UpdateLinkedNavigation(std::string,vvSlicerManager*,vvSlicer*)), + this,SLOT(UpdateLinkedNavigation(std::string,vvSlicerManager*,vvSlicer*))); connect(mSlicerManagers.back(), SIGNAL(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)), this,SLOT(ChangeImageWithIndexOffset(vvSlicerManager*,int,int))); connect(mSlicerManagers.back(), SIGNAL(LandmarkAdded()),landmarksPanel,SLOT(AddPoint())); @@ -2715,8 +2851,9 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen ShowLastImage(); InitDisplay(); qApp->processEvents(); - + // End + ImageInfoChanged(); return slicer_manager; } //------------------------------------------------------------------------------