X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=vv%2FvvMainWindow.cxx;h=b102e6234c62fee01ba7f9c683bce3f07d9c998a;hb=3c2462eafabcf428b4d2775c414a7b5f62511d3f;hp=882bc2b16d631c7cf68233f30ac3fe0c3640cf81;hpb=274bf49f4b2781c521ddc04c0fc77ac43f2f2b82;p=clitk.git diff --git a/vv/vvMainWindow.cxx b/vv/vvMainWindow.cxx index 882bc2b..b102e62 100644 --- a/vv/vvMainWindow.cxx +++ b/vv/vvMainWindow.cxx @@ -45,6 +45,8 @@ #include "vvMesh.h" #include "vvStructSelector.h" #include "vvMeshReader.h" +#include "vvSaveState.h" +#include "vvReadState.h" #include "clitkConfiguration.h" // ITK include @@ -144,20 +146,27 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() connect(actionSave_image,SIGNAL(triggered()),this,SLOT(SaveAs())); contextActions.push_back(actionSave_image); + QAction* actionSave_state = contextMenu.addAction(QIcon(QString::fromUtf8(":/common/icons/filesave.png")), + tr("Save Current State")); + connect(actionSave_state,SIGNAL(triggered()),this,SLOT(SaveCurrentState())); + contextActions.push_back(actionSave_state); + + QAction* actionRead_state = contextMenu.addAction(QIcon(QString::fromUtf8(":/common/icons/filesave.png")), + tr("Read Saved State")); + connect(actionRead_state,SIGNAL(triggered()),this,SLOT(ReadSavedState())); + contextActions.push_back(actionRead_state); + contextMenu.addSeparator(); contextMenu.addAction(actionAdd_VF_to_current_Image); contextActions.push_back(actionAdd_VF_to_current_Image); - QAction* actionAdd_Overlay_to_current_Image = menuOverlay->addAction(QIcon(QString::fromUtf8(":/common/icons/GPSup.png")), - tr("Add overlay image to current image")); - contextMenu.addAction(actionAdd_Overlay_to_current_Image); - contextActions.push_back(actionAdd_Overlay_to_current_Image); - - connect(actionAdd_Overlay_to_current_Image,SIGNAL(triggered()), this,SLOT(SelectOverlayImage())); + //QAction* actionAdd_Overlay_to_current_Image = menuOverlay->addAction(QIcon(QString::fromUtf8(":/common/icons/GPSup.png")), + // tr("Add overlay image to current image")); + contextMenu.addAction(actionAdd_overlay_image_to_current_image); + contextActions.push_back(actionAdd_overlay_image_to_current_image); contextMenu.addAction(actionAdd_fusion_image); - connect(actionAdd_fusion_image,SIGNAL(triggered()),this,SLOT(SelectFusionImage())); contextActions.push_back(actionAdd_fusion_image); contextMenu.addSeparator(); @@ -209,7 +218,7 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() dicomSeriesSelector = new vvDicomSeriesSelector(); inverseButton->setEnabled(0); - actionAdd_Overlay_to_current_Image->setEnabled(0); + actionAdd_overlay_image_to_current_image->setEnabled(0); actionSave_As->setEnabled(0); actionAdd_VF_to_current_Image->setEnabled(0); actionAdd_fusion_image->setEnabled(0); @@ -255,9 +264,12 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() connect(actionOpen_Image_With_Time,SIGNAL(triggered()),this,SLOT(OpenImageWithTime())); connect(actionMerge_images_as_n_dim_t, SIGNAL(triggered()), this, SLOT(MergeImagesWithTime())); connect(actionSave_As,SIGNAL(triggered()),this,SLOT(SaveAs())); + connect(actionSave_current_state,SIGNAL(triggered()),this,SLOT(SaveCurrentState())); + connect(actionRead_saved_state,SIGNAL(triggered()),this,SLOT(ReadSavedState())); connect(actionExit,SIGNAL(triggered()),this,SLOT(close())); connect(actionAdd_VF_to_current_Image,SIGNAL(triggered()),this,SLOT(OpenField())); - connect(actionNavigation_Help,SIGNAL(triggered()),this,SLOT(ShowHelpDialog())); + connect(actionAdd_fusion_image,SIGNAL(triggered()),this,SLOT(SelectFusionImage())); + connect(actionAdd_overlay_image_to_current_image,SIGNAL(triggered()), this,SLOT(SelectOverlayImage())); connect(actionNavigation_Help,SIGNAL(triggered()),this,SLOT(ShowHelpDialog())); connect(actionDocumentation,SIGNAL(triggered()),this,SLOT(ShowDocumentation())); connect(actionRegister_vv,SIGNAL(triggered()),this,SLOT(PopupRegisterForm())); @@ -275,6 +287,7 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() connect(actionNorth_West_Window,SIGNAL(triggered()),this,SLOT(SaveNOScreenshot())); connect(actionSouth_East_Window,SIGNAL(triggered()),this,SLOT(SaveSEScreenshot())); connect(actionSouth_West_Window,SIGNAL(triggered()),this,SLOT(SaveSOScreenshot())); + connect(actionSave_all_slices,SIGNAL(triggered()),this,SLOT(SaveScreenshotAllSlices())); connect(DataTree,SIGNAL(itemSelectionChanged()),this,SLOT(ImageInfoChanged())); connect(DataTree,SIGNAL(itemClicked(QTreeWidgetItem*, int)),this, @@ -294,7 +307,8 @@ vvMainWindow::vvMainWindow():vvMainWindowBase() connect(linkPanel,SIGNAL(addLink(QString,QString)),this,SLOT(AddLink(QString,QString))); connect(linkPanel,SIGNAL(removeLink(QString,QString)),this,SLOT(RemoveLink(QString,QString))); connect(overlayPanel,SIGNAL(VFPropertyUpdated(int,int,int,int,double,double,double)),this,SLOT(SetVFProperty(int,int,int,int,double,double,double))); - connect(overlayPanel,SIGNAL(OverlayPropertyUpdated(int)),this,SLOT(SetOverlayProperty(int))); + connect(overlayPanel,SIGNAL(OverlayPropertyUpdated(int,int,double,double)), + this,SLOT(SetOverlayProperty(int,int,double,double))); connect(overlayPanel,SIGNAL(FusionPropertyUpdated(int,int,int,double,double)), this,SLOT(SetFusionProperty(int,int,int,double,double))); connect(landmarksPanel,SIGNAL(UpdateRenderWindows()),this,SLOT(UpdateRenderWindows())); @@ -477,15 +491,8 @@ void vvMainWindow::OpenVTKContour() //------------------------------------------------------------------------------ -void vvMainWindow::OpenDCStructContour() +void vvMainWindow::AddDCStructContour(int index, QString file) { - if (mSlicerManagers.size() > 0) { - QString Extensions = "Dicom Files ( *.dcm RS*)"; - Extensions += ";;All Files (*)"; - QString file = QFileDialog::getOpenFileName(this,tr("Merge Images"),mInputPathName,Extensions); - if (file.isNull()) - return; - int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]); vvMeshReader reader; reader.SetFilename(file.toStdString()); vvStructSelector selector; @@ -505,6 +512,19 @@ void vvMainWindow::OpenDCStructContour() AddContour(index,*i,selector.PropagationEnabled()); QApplication::restoreOverrideCursor(); } +} + +//------------------------------------------------------------------------------ +void vvMainWindow::OpenDCStructContour() +{ + if (mSlicerManagers.size() > 0) { + QString Extensions = "Dicom Files ( *.dcm RS*)"; + Extensions += ";;All Files (*)"; + QString file = QFileDialog::getOpenFileName(this,tr("Merge Images"),mInputPathName,Extensions); + if (file.isNull()) + return; + int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]); + AddDCStructContour(index, file); } } //------------------------------------------------------------------------------ @@ -915,8 +935,8 @@ void vvMainWindow::LoadImages(std::vector files, vvImageReader::Loa this, SLOT(OverlayChanged(int,double,double))); connect(mSlicerManagers.back(), SIGNAL(UpdateFusion(int, double)), this, SLOT(FusionChanged(int,double))); - connect(mSlicerManagers.back(), SIGNAL(WindowLevelChanged(double, double,int, int)), - this,SLOT(WindowLevelChanged(double, double, int, int))); + connect(mSlicerManagers.back(), SIGNAL(WindowLevelChanged()), + this,SLOT(WindowLevelChanged())); connect(mSlicerManagers.back(), SIGNAL(UpdateSlice(int,int)), this,SLOT(UpdateSlice(int,int))); connect(mSlicerManagers.back(), SIGNAL(UpdateTSlice(int, int)), @@ -1021,6 +1041,7 @@ void vvMainWindow::ImageInfoChanged() actionSave_As->setEnabled(1); actionAdd_VF_to_current_Image->setEnabled(1); actionAdd_fusion_image->setEnabled(1); + actionAdd_overlay_image_to_current_image->setEnabled(1); actionNorth_East_Window->setEnabled(1); actionNorth_West_Window->setEnabled(1); actionSouth_East_Window->setEnabled(1); @@ -1122,10 +1143,6 @@ void vvMainWindow::ImageInfoChanged() break; } } - windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow()); - levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel()); - presetComboBox->setCurrentIndex(mSlicerManagers[index]->GetPreset()); - colorMapComboBox->setCurrentIndex(mSlicerManagers[index]->GetColorMap()); infoPanel->setFileName(image); infoPanel->setDimension(dim); @@ -1147,10 +1164,7 @@ void vvMainWindow::ImageInfoChanged() break; } } - windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow()); - levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel()); - presetComboBox->setCurrentIndex(mSlicerManagers[index]->GetPreset()); - colorMapComboBox->setCurrentIndex(mSlicerManagers[index]->GetColorMap()); + WindowLevelChanged(); if (mSlicerManagers[index]->GetSlicer(0)->GetVF()) { overlayPanel->getVFName(mSlicerManagers[index]->GetVFName().c_str()); @@ -1163,22 +1177,14 @@ void vvMainWindow::ImageInfoChanged() } if (mSlicerManagers[index]->GetSlicer(0)->GetOverlay()) { overlayPanel->getOverlayName(mSlicerManagers[index]->GetOverlayName().c_str()); - overlayPanel->getOverlayProperty(mSlicerManagers[index]->GetOverlayColor()); } else { overlayPanel->getOverlayName(mSlicerManagers[index]->GetOverlayName().c_str()); - overlayPanel->getOverlayProperty(-1); } if (mSlicerManagers[index]->GetSlicer(0)->GetFusion()) { overlayPanel->getFusionName(mSlicerManagers[index]->GetFusionName().c_str()); - overlayPanel->getFusionProperty(mSlicerManagers[index]->GetFusionOpacity(), - mSlicerManagers[index]->GetFusionThresholdOpacity(), - mSlicerManagers[index]->GetFusionColorMap(), - mSlicerManagers[index]->GetFusionWindow(), - mSlicerManagers[index]->GetFusionLevel()); } else { overlayPanel->getFusionName(mSlicerManagers[index]->GetFusionName().c_str()); - overlayPanel->getFusionProperty(-1, -1, -1, -1, -1); } } } @@ -1629,12 +1635,34 @@ void vvMainWindow::FusionChanged(int visibility, double value) //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ -void vvMainWindow::WindowLevelChanged(double window, double level,int preset,int colormap) +void vvMainWindow::WindowLevelChanged() { - windowSpinBox->setValue(window); - levelSpinBox->setValue(level); - colorMapComboBox->setCurrentIndex(colormap); - presetComboBox->setCurrentIndex(preset); + // Base image + int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]); + if(index==-1) return; + windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow()); + levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel()); + colorMapComboBox->setCurrentIndex(mSlicerManagers[index]->GetColorMap()); + presetComboBox->setCurrentIndex(mSlicerManagers[index]->GetPreset()); + + // Overlay image + if (mSlicerManagers[index]->GetSlicer(0)->GetOverlay()) + overlayPanel->getOverlayProperty(mSlicerManagers[index]->GetOverlayColor(), + mSlicerManagers[index]->GetLinkOverlayWindowLevel(), + mSlicerManagers[index]->GetOverlayColorWindow(), + mSlicerManagers[index]->GetOverlayColorLevel()); + else + overlayPanel->getOverlayProperty(-1,0,0.,0.); + + // Fusion image + if (mSlicerManagers[index]->GetSlicer(0)->GetFusion()) + overlayPanel->getFusionProperty(mSlicerManagers[index]->GetFusionOpacity(), + mSlicerManagers[index]->GetFusionThresholdOpacity(), + mSlicerManagers[index]->GetFusionColorMap(), + mSlicerManagers[index]->GetFusionWindow(), + mSlicerManagers[index]->GetFusionLevel()); + else + overlayPanel->getFusionProperty(-1, -1, -1, -1, -1); } //------------------------------------------------------------------------------ @@ -1646,6 +1674,17 @@ void vvMainWindow::WindowLevelEdited() } //------------------------------------------------------------------------------ +//------------------------------------------------------------------------------ +void vvMainWindow::SetWindowLevel(double w, double l) +{ + windowSpinBox->setValue(w); + levelSpinBox->setValue(l); + presetComboBox->setCurrentIndex(6); + colorMapComboBox->setCurrentIndex(0); + UpdateWindowLevel(); +} +//------------------------------------------------------------------------------ + //------------------------------------------------------------------------------ void vvMainWindow::UpdateWindowLevel() { @@ -1657,8 +1696,7 @@ void vvMainWindow::UpdateWindowLevel() mSlicerManagers[index]->SetColorLevel(levelSpinBox->value()); mSlicerManagers[index]->SetPreset(presetComboBox->currentIndex()); mSlicerManagers[index]->Render(); - windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow()); - levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel()); + WindowLevelChanged(); } } //------------------------------------------------------------------------------ @@ -1686,11 +1724,16 @@ void vvMainWindow::SwitchWindowLevel() //------------------------------------------------------------------------------ void vvMainWindow::ApplyWindowLevelToAllImages() { + int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]); + if(index==-1) return; + double window = mSlicerManagers[index]->GetColorWindow(); + double level = mSlicerManagers[index]->GetColorLevel(); + for (unsigned int i = 0; i < mSlicerManagers.size(); i++) { if (mSlicerManagers[i] == NULL) continue; - mSlicerManagers[i]->SetColorWindow(windowSpinBox->value()); - mSlicerManagers[i]->SetColorLevel(levelSpinBox->value()); + mSlicerManagers[i]->SetColorWindow(window); + mSlicerManagers[i]->SetColorLevel(level); mSlicerManagers[i]->SetPreset(6); mSlicerManagers[i]->Render(); } @@ -1791,69 +1834,74 @@ void vvMainWindow::SelectOverlayImage() //------------------------------------------------------------------------------ void vvMainWindow::AddOverlayImage(int index, QString file) { - - mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str(); - itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO( - file.toStdString().c_str(), itk::ImageIOFactory::ReadMode); - reader->SetFileName(file.toStdString().c_str()); - reader->ReadImageInformation(); - std::string component = reader->GetComponentTypeAsString(reader->GetComponentType()); - int dimension = reader->GetNumberOfDimensions(); - QApplication::setOverrideCursor(QCursor(Qt::WaitCursor)); - vvProgressDialog progress("Opening " + file.toStdString()); - qApp->processEvents(); - - std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str(); - if (mSlicerManagers[index]->SetOverlay(file.toStdString(),dimension, component)) { - //create an item in the tree with good settings - QTreeWidgetItem *item = new QTreeWidgetItem(); - item->setData(0,Qt::UserRole,file.toStdString().c_str()); - item->setData(1,Qt::UserRole,tr("overlay")); - QFileInfo fileinfo(file); //Do not show the path - item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName()); - item->setToolTip(COLUMN_IMAGE_NAME, mSlicerManagers[index]->GetListOfAbsoluteFilePathInOneString("overlay").c_str()); + if (QFile::exists(file)) + { + mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str(); + itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO( + file.toStdString().c_str(), itk::ImageIOFactory::ReadMode); + reader->SetFileName(file.toStdString().c_str()); + reader->ReadImageInformation(); + std::string component = reader->GetComponentTypeAsString(reader->GetComponentType()); + int dimension = reader->GetNumberOfDimensions(); + QApplication::setOverrideCursor(QCursor(Qt::WaitCursor)); + vvProgressDialog progress("Opening " + file.toStdString()); qApp->processEvents(); - for (int j = 1; j <= 4; j++) { - item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole)); - } + std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str(); + if (mSlicerManagers[index]->SetOverlay(file.toStdString(),dimension, component)) { + //create an item in the tree with good settings + QTreeWidgetItem *item = new QTreeWidgetItem(); + item->setData(0,Qt::UserRole,file.toStdString().c_str()); + item->setData(1,Qt::UserRole,tr("overlay")); + QFileInfo fileinfo(file); //Do not show the path + item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName()); + item->setToolTip(COLUMN_IMAGE_NAME, mSlicerManagers[index]->GetListOfAbsoluteFilePathInOneString("overlay").c_str()); + qApp->processEvents(); - //Create the buttons for reload and close - qApp->processEvents(); - QTreePushButton* cButton = new QTreePushButton; - cButton->setItem(item); - cButton->setColumn(COLUMN_CLOSE_IMAGE); - cButton->setToolTip(tr("close image")); - cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png"))); - connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)), - this,SLOT(CloseImage(QTreeWidgetItem*, int))); + for (int j = 1; j <= 4; j++) { + item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole)); + } - QTreePushButton* rButton = new QTreePushButton; - rButton->setItem(item); - rButton->setColumn(COLUMN_RELOAD_IMAGE); - rButton->setToolTip(tr("reload image")); - rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png"))); - connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)), - this,SLOT(ReloadImage(QTreeWidgetItem*, int))); + //Create the buttons for reload and close + qApp->processEvents(); + QTreePushButton* cButton = new QTreePushButton; + cButton->setItem(item); + cButton->setColumn(COLUMN_CLOSE_IMAGE); + cButton->setToolTip(tr("close image")); + cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png"))); + connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)), + this,SLOT(CloseImage(QTreeWidgetItem*, int))); - DataTree->topLevelItem(index)->setExpanded(1); - DataTree->topLevelItem(index)->addChild(item); - DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton); - DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton); + QTreePushButton* rButton = new QTreePushButton; + rButton->setItem(item); + rButton->setColumn(COLUMN_RELOAD_IMAGE); + rButton->setToolTip(tr("reload image")); + rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png"))); + connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)), + this,SLOT(ReloadImage(QTreeWidgetItem*, int))); - //set the id of the image - QString id = DataTree->topLevelItem(index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString(); - item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str()); - UpdateTree(); - qApp->processEvents(); - ImageInfoChanged(); - QApplication::restoreOverrideCursor(); - } else { - QApplication::restoreOverrideCursor(); - QString error = "Cannot import the new image.\n"; - error += mSlicerManagers[index]->GetLastError().c_str(); - QMessageBox::information(this,tr("Problem reading image !"),error); + DataTree->topLevelItem(index)->setExpanded(1); + DataTree->topLevelItem(index)->addChild(item); + DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton); + DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton); + + //set the id of the image + QString id = DataTree->topLevelItem(index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString(); + item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str()); + UpdateTree(); + qApp->processEvents(); + ImageInfoChanged(); + QApplication::restoreOverrideCursor(); + } else { + QApplication::restoreOverrideCursor(); + QString error = "Cannot import the new image.\n"; + error += mSlicerManagers[index]->GetLastError().c_str(); + QMessageBox::information(this,tr("Problem reading image !"),error); + } + WindowLevelChanged(); } + else + QMessageBox::information(this,tr("Problem reading Overlay !"),"File doesn't exist!"); } //------------------------------------------------------------------------------ @@ -1921,73 +1969,78 @@ void vvMainWindow::ResetTransformationToIdentity() //------------------------------------------------------------------------------ void vvMainWindow::AddFusionImage(int index, QString file) { - mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str(); - itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO( - file.toStdString().c_str(), itk::ImageIOFactory::ReadMode); - reader->SetFileName(file.toStdString().c_str()); - reader->ReadImageInformation(); - std::string component = reader->GetComponentTypeAsString(reader->GetComponentType()); - if (reader) { - QApplication::setOverrideCursor(QCursor(Qt::WaitCursor)); - vvProgressDialog progress("Opening fusion"); - qApp->processEvents(); - - std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str(); - if (mSlicerManagers[index]->SetFusion(file.toStdString(), - reader->GetNumberOfDimensions(), component)) { - //create an item in the tree with good settings - QTreeWidgetItem *item = new QTreeWidgetItem(); - item->setData(0,Qt::UserRole,file.toStdString().c_str()); - item->setData(1,Qt::UserRole,tr("fusion")); - QFileInfo fileinfo(filename.c_str()); //Do not show the path - item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName()); - item->setToolTip(COLUMN_IMAGE_NAME, mSlicerManagers[index]->GetListOfAbsoluteFilePathInOneString("fusion").c_str()); + if (QFile::exists(file)) + { + mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str(); + itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO( + file.toStdString().c_str(), itk::ImageIOFactory::ReadMode); + reader->SetFileName(file.toStdString().c_str()); + reader->ReadImageInformation(); + std::string component = reader->GetComponentTypeAsString(reader->GetComponentType()); + if (reader) { + QApplication::setOverrideCursor(QCursor(Qt::WaitCursor)); + vvProgressDialog progress("Opening fusion"); qApp->processEvents(); - for (int j = 1; j <= 4; j++) { - item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole)); - } + std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str(); + if (mSlicerManagers[index]->SetFusion(file.toStdString(), + reader->GetNumberOfDimensions(), component)) { + //create an item in the tree with good settings + QTreeWidgetItem *item = new QTreeWidgetItem(); + item->setData(0,Qt::UserRole,file.toStdString().c_str()); + item->setData(1,Qt::UserRole,tr("fusion")); + QFileInfo fileinfo(filename.c_str()); //Do not show the path + item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName()); + item->setToolTip(COLUMN_IMAGE_NAME, mSlicerManagers[index]->GetListOfAbsoluteFilePathInOneString("fusion").c_str()); + qApp->processEvents(); - //Create the buttons for reload and close - qApp->processEvents(); - QTreePushButton* cButton = new QTreePushButton; - cButton->setItem(item); - cButton->setColumn(COLUMN_CLOSE_IMAGE); - cButton->setToolTip(tr("close image")); - cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png"))); - connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)), - this,SLOT(CloseImage(QTreeWidgetItem*, int))); + for (int j = 1; j <= 4; j++) { + item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole)); + } - QTreePushButton* rButton = new QTreePushButton; - rButton->setItem(item); - rButton->setColumn(COLUMN_RELOAD_IMAGE); - rButton->setToolTip(tr("reload image")); - rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png"))); - connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)), - this,SLOT(ReloadImage(QTreeWidgetItem*, int))); + //Create the buttons for reload and close + qApp->processEvents(); + QTreePushButton* cButton = new QTreePushButton; + cButton->setItem(item); + cButton->setColumn(COLUMN_CLOSE_IMAGE); + cButton->setToolTip(tr("close image")); + cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png"))); + connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)), + this,SLOT(CloseImage(QTreeWidgetItem*, int))); - DataTree->topLevelItem(index)->setExpanded(1); - DataTree->topLevelItem(index)->addChild(item); - DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton); - DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton); + QTreePushButton* rButton = new QTreePushButton; + rButton->setItem(item); + rButton->setColumn(COLUMN_RELOAD_IMAGE); + rButton->setToolTip(tr("reload image")); + rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png"))); + connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)), + this,SLOT(ReloadImage(QTreeWidgetItem*, int))); - //set the id of the image - QString id = DataTree->topLevelItem(index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString(); - item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str()); - UpdateTree(); - qApp->processEvents(); - ImageInfoChanged(); - QApplication::restoreOverrideCursor(); + DataTree->topLevelItem(index)->setExpanded(1); + DataTree->topLevelItem(index)->addChild(item); + DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton); + DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton); + + //set the id of the image + QString id = DataTree->topLevelItem(index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString(); + item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str()); + UpdateTree(); + qApp->processEvents(); + ImageInfoChanged(); + QApplication::restoreOverrideCursor(); + } else { + QApplication::restoreOverrideCursor(); + QString error = "Cannot import the new image.\n"; + error += mSlicerManagers[index]->GetLastError().c_str(); + QMessageBox::information(this,tr("Problem reading image !"),error); + } } else { - QApplication::restoreOverrideCursor(); QString error = "Cannot import the new image.\n"; - error += mSlicerManagers[index]->GetLastError().c_str(); QMessageBox::information(this,tr("Problem reading image !"),error); } - } else { - QString error = "Cannot import the new image.\n"; - QMessageBox::information(this,tr("Problem reading image !"),error); } + else + QMessageBox::information(this,tr("Problem reading Fusion !"),"File doesn't exist!"); } //------------------------------------------------------------------------------ @@ -2007,6 +2060,7 @@ void vvMainWindow::OpenField() } QString Extensions = "Images ( *.mhd)"; + Extensions += ";;Images ( *.mha)"; Extensions += ";;Images ( *.vf)"; QString file = QFileDialog::getOpenFileName(this,tr("Load deformation field"),mInputPathName,Extensions); if (!file.isEmpty()) @@ -2136,12 +2190,15 @@ void vvMainWindow::SetVFProperty(int subsampling, int scale, int log, int width, //------------------------------------------------------------------------------ -void vvMainWindow::SetOverlayProperty(int color) +void vvMainWindow::SetOverlayProperty(int color, int linked, double window, double level) { int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]); if (mSlicerManagers[index]->GetSlicer(0)->GetOverlay()) { mSlicerManagers[index]->SetOverlayColor(color); mSlicerManagers[index]->SetColorMap(0); + mSlicerManagers[index]->SetLinkOverlayWindowLevel(linked); + mSlicerManagers[index]->SetOverlayColorWindow(window); + mSlicerManagers[index]->SetOverlayColorLevel(level); mSlicerManagers[index]->Render(); } } @@ -2177,6 +2234,7 @@ void vvMainWindow::SaveAs() OutputListeFormat.clear(); if (dimension == 1) { OutputListeFormat.push_back(".mhd"); + OutputListeFormat.push_back(".mha"); } if (dimension == 2) { OutputListeFormat.push_back(".bmp"); @@ -2184,14 +2242,17 @@ void vvMainWindow::SaveAs() OutputListeFormat.push_back(".jpeg"); OutputListeFormat.push_back(".tif"); OutputListeFormat.push_back(".mhd"); + OutputListeFormat.push_back(".mha"); OutputListeFormat.push_back(".hdr"); OutputListeFormat.push_back(".vox"); } else if (dimension == 3) { OutputListeFormat.push_back(".mhd"); + OutputListeFormat.push_back(".mha"); OutputListeFormat.push_back(".hdr"); OutputListeFormat.push_back(".vox"); } else if (dimension == 4) { OutputListeFormat.push_back(".mhd"); + OutputListeFormat.push_back(".mha"); } QString Extensions = "AllFiles(*.*)"; for (int i = 0; i < OutputListeFormat.count(); i++) { @@ -2235,6 +2296,54 @@ void vvMainWindow::SaveAs() } //------------------------------------------------------------------------------ +//------------------------------------------------------------------------------ +void vvMainWindow::SaveCurrentState() +{ + QString Extensions = "XML Files(*.xml)"; + QString fileName = QFileDialog::getSaveFileName(this, + tr("Save Current Window State"), + "", + Extensions); + + SaveCurrentStateAs(fileName.toStdString()); +} +//------------------------------------------------------------------------------ + +//------------------------------------------------------------------------------ +void vvMainWindow::SaveCurrentStateAs(const std::string& stateFile) +{ + vvSaveState save_state; + save_state.Run(this, stateFile); + + std::cout << "void vvMainWindow::SaveCurrentState()" << std::endl; +} + +//------------------------------------------------------------------------------ +void vvMainWindow::ReadSavedState() +{ + QString Extensions = "XML Files(*.xml)"; + QString fileName = QFileDialog::getOpenFileName(this, + tr("Load Window State"), + "", + Extensions); + + ReadSavedStateFile(fileName.toStdString()); +} +//------------------------------------------------------------------------------ + +//------------------------------------------------------------------------------ +void vvMainWindow::ReadSavedStateFile(const std::string& stateFile) +{ + vvReadState read_state; + read_state.Run(this, stateFile); +} +//------------------------------------------------------------------------------ + +//------------------------------------------------------------------------------ +void vvMainWindow::LinkAllImages() +{ + linkPanel->linkAll(); +} //------------------------------------------------------------------------------ void vvMainWindow::AddLink(QString image1,QString image2) @@ -2281,10 +2390,13 @@ void vvMainWindow::RemoveLink(QString image1,QString image2) //------------------------------------------------------------------------------ void vvMainWindow::ChangeImageWithIndexOffset(vvSlicerManager *sm, int slicer, int offset) { + if(mSlicerManagers.size()==1) + return; + int index = 0; while(sm != mSlicerManagers[index]) index++; - index = (index+offset) % mSlicerManagers.size(); + index = (index+offset+mSlicerManagers.size()) % mSlicerManagers.size(); QTreeWidgetItem* item = GetItemFromSlicerManager(mSlicerManagers[index]); item->setData(slicer+1,Qt::CheckStateRole,2); //change checkbox @@ -2493,27 +2605,22 @@ void vvMainWindow::UpdateTSlice(int slicer, int slice) void vvMainWindow::UpdateSliceRange(int slicer, int min, int max, int tmin, int tmax) { int position = int((min+max)/2); - int tPosition = int((tmin+tmax)/2); if (slicer == 0) { NOVerticalSlider->setValue(position); NOVerticalSlider->setRange(min,max); NOHorizontalSlider->setRange(tmin,tmax); - NOHorizontalSlider->setValue(tPosition); } else if (slicer == 1) { NEVerticalSlider->setValue(position); NEVerticalSlider->setRange(min,max); NEHorizontalSlider->setRange(tmin,tmax); - NEHorizontalSlider->setValue(tPosition); } else if (slicer == 2) { SOVerticalSlider->setValue(position); SOVerticalSlider->setRange(min,max); SOHorizontalSlider->setRange(tmin,tmax); - SOHorizontalSlider->setValue(tPosition); } else if (slicer == 3) { SEVerticalSlider->setValue(position); SEVerticalSlider->setRange(min,max); SEHorizontalSlider->setRange(tmin,tmax); - SEHorizontalSlider->setValue(tPosition); } } //------------------------------------------------------------------------------ @@ -2551,6 +2658,56 @@ void vvMainWindow::SaveSEScreenshot() //------------------------------------------------------------------------------ +//------------------------------------------------------------------------------ +void vvMainWindow::SaveScreenshotAllSlices() +{ + QVTKWidget *widget = NOViewWidget; + + int index = 0;// GetSlicerIndexFromItem(DataTree->selectedItems()[0]); + vvSlicerManager * SM = mSlicerManagers[index]; + vvImage * image = SM->GetImage(); + vvSlicer * slicer = SM->GetSlicer(0); + int orientation = slicer->GetOrientation(); + int nbSlices = image->GetSize()[orientation]; + vtkSmartPointer renderWindow = widget->GetRenderWindow(); + + // Select filename base + QString filename = QFileDialog::getSaveFileName(this, + tr("Save As (filename will be completed by slice number)"), + itksys::SystemTools::GetFilenamePath(mSlicerManagers[index]->GetFileName()).c_str(), + "Images( *.png);;Images( *.jpg)"); + + // Loop on slices + for(int i=0; iSetSlice(i); // -> change the slice of the current slicer + SM->UpdateSlice(0); // --> this one emit UpdateSlice + QCoreApplication::flush(); // -> needed to force display of contours + + // Screenshot + vtkSmartPointer windowToImageFilter = vtkSmartPointer::New(); + windowToImageFilter->SetInput(renderWindow); + windowToImageFilter->SetMagnification(1); + windowToImageFilter->SetInputBufferTypeToRGBA(); //also record the alpha (transparency) channel + windowToImageFilter->Update(); + + vtkSmartPointer writer = vtkSmartPointer::New(); + std::string fn = itksys::SystemTools::GetFilenameWithoutLastExtension(filename.toStdString()); + std::string num = clitk::toString(i); + if (i<10) num = "0"+num; + if (i<100) num = "0"+num; + if (i<1000) num = "0"+num; + + fn = itksys::SystemTools::GetFilenamePath(filename.toStdString()) + "/"+ fn + + "_" + num + itksys::SystemTools::GetFilenameLastExtension(filename.toStdString()); + writer->SetFileName(fn.c_str()); + writer->SetInput(windowToImageFilter->GetOutput()); + writer->Write(); + } +} +//------------------------------------------------------------------------------ + + //------------------------------------------------------------------------------ void vvMainWindow::SaveScreenshot(QVTKWidget *widget) { @@ -2837,8 +2994,8 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen this, SLOT(OverlayChanged(int,double,double))); connect(mSlicerManagers.back(), SIGNAL(UpdateFusion(int, double)), this, SLOT(FusionChanged(int,double))); - connect(mSlicerManagers.back(), SIGNAL(WindowLevelChanged(double, double,int, int)), - this,SLOT(WindowLevelChanged(double, double, int, int))); + connect(mSlicerManagers.back(), SIGNAL(WindowLevelChanged()), + this,SLOT(WindowLevelChanged())); connect(mSlicerManagers.back(), SIGNAL(UpdateSlice(int,int)), this,SLOT(UpdateSlice(int,int))); connect(mSlicerManagers.back(), SIGNAL(UpdateTSlice(int, int)),